RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 RIMBP3CA6NJZ7 1639 aa12.46□□□□□ -0.42
TCF4-209ENST00000544241 RIMBP3BA6NNM3 1639 aa12.46□□□□□ -0.42
TCF4-209ENST00000544241 RIMBP3Q9UFD9 1639 aa12.46□□□□□ -0.42
TCF4-209ENST00000544241 MAP3K4Q9Y6R4 1608 aa12.46□□□□□ -0.42
TCF4-209ENST00000544241 KCNJ4P48050 445 aa12.45□□□□□ -0.42
TCF4-209ENST00000544241 DCTPP1Q9H773 170 aa12.45□□□□□ -0.42
TCF4-209ENST00000544241 ANAPC15P60006 121 aa12.45□□□□□ -0.42
TCF4-209ENST00000544241 NCBP1Q09161 790 aaKnown RBP12.45□□□□□ -0.42
TCF4-209ENST00000544241 TERF2Q15554 542 aa12.45□□□□□ -0.42
TCF4-209ENST00000544241 API5Q9BZZ5 524 aaKnown RBP12.45□□□□□ -0.42
TCF4-209ENST00000544241 CD109Q6YHK3 1445 aa12.45□□□□□ -0.42
TCF4-209ENST00000544241 FAM177BA6PVY3 158 aa12.44□□□□□ -0.42
TCF4-209ENST00000544241 SLFN14P0C7P3 912 aa12.44□□□□□ -0.42
TCF4-209ENST00000544241 NEK4P51957 841 aa12.44□□□□□ -0.42
TCF4-209ENST00000544241 UBE2HP62256 183 aa12.44□□□□□ -0.42
TCF4-209ENST00000544241 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
TCF4-209ENST00000544241 CFAP70Q5T0N1 1121 aa12.44□□□□□ -0.42
TCF4-209ENST00000544241 U2SURPO15042 1029 aaKnown RBP12.44□□□□□ -0.42
TCF4-209ENST00000544241 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
TCF4-209ENST00000544241 ABCC4O15439 1325 aa12.44□□□□□ -0.42
TCF4-209ENST00000544241 USP48Q86UV5 1035 aa12.43□□□□□ -0.42
TCF4-209ENST00000544241 C17orf53Q8N3J3 647 aaPredicted RBP12.43□□□□□ -0.42
TCF4-209ENST00000544241 CCDC112Q8NEF3 446 aa12.43□□□□□ -0.42
TCF4-209ENST00000544241 SDSP20132 328 aa12.42□□□□□ -0.42
TCF4-209ENST00000544241 FOXD4L5Q5VV16 416 aaPredicted RBP12.42□□□□□ -0.42
TCF4-209ENST00000544241 SIRT2Q8IXJ6 389 aa12.42□□□□□ -0.42
TCF4-209ENST00000544241 FOXD4L4Q8WXT5 416 aaPredicted RBP12.42□□□□□ -0.42
TCF4-209ENST00000544241 SLC12A5Q9H2X9 1139 aa12.42□□□□□ -0.42
TCF4-209ENST00000544241 SETBP1Q9Y6X0 1596 aa12.42□□□□□ -0.42
TCF4-209ENST00000544241 IGSF3O75054 1194 aa12.42□□□□□ -0.42
TCF4-209ENST00000544241 PLCB2Q00722 1185 aa12.42□□□□□ -0.42
TCF4-209ENST00000544241 C1orf115Q9H7X2 142 aa12.42□□□□□ -0.42
TCF4-209ENST00000544241 INO80Q9ULG1 1556 aaPredicted RBP12.42□□□□□ -0.42
TCF4-209ENST00000544241 RPAP2Q8IXW5 612 aaPredicted RBP12.41□□□□□ -0.42
TCF4-209ENST00000544241 KIF18AQ8NI77 898 aa12.41□□□□□ -0.42
TCF4-209ENST00000544241 ABCA6Q8N139 1617 aa12.41□□□□□ -0.42
TCF4-209ENST00000544241 MRPL50Q8N5N7 158 aaKnown RBP12.41□□□□□ -0.42
TCF4-209ENST00000544241 CCDC192P0DO97 292 aa12.4□□□□□ -0.42
TCF4-209ENST00000544241 MPNDQ8N594 471 aa12.4□□□□□ -0.42
TCF4-209ENST00000544241 ZNF397Q8NF99 534 aaPredicted RBP12.4□□□□□ -0.42
TCF4-209ENST00000544241 VGLL3A8MV65 326 aa12.4□□□□□ -0.42
TCF4-209ENST00000544241 HAP1P54257 671 aaPredicted RBP12.4□□□□□ -0.42
TCF4-209ENST00000544241 RNF20Q5VTR2 975 aa12.4□□□□□ -0.42
TCF4-209ENST00000544241 PYCARDQ9ULZ3 195 aa12.4□□□□□ -0.42
TCF4-209ENST00000544241 EPB41L2O43491 1005 aaKnown RBP12.39□□□□□ -0.43
TCF4-209ENST00000544241 KCNF1Q9H3M0 494 aa12.39□□□□□ -0.43
TCF4-209ENST00000544241 RTL1A6NKG5 1358 aa12.39□□□□□ -0.43
TCF4-209ENST00000544241 TET3O43151 1660 aa12.39□□□□□ -0.43
TCF4-209ENST00000544241 TULP2O00295 520 aa12.39□□□□□ -0.43
TCF4-209ENST00000544241 GADD45BO75293 160 aaPredicted RBP12.39□□□□□ -0.43
TCF4-209ENST00000544241 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.39□□□□□ -0.43
TCF4-209ENST00000544241 RGS12O14924 1447 aa12.38□□□□□ -0.43
TCF4-209ENST00000544241 VAMP4O75379 141 aa12.38□□□□□ -0.43
TCF4-209ENST00000544241 TNNT1P13805 278 aa12.38□□□□□ -0.43
TCF4-209ENST00000544241 SLFNL1Q499Z3 407 aa12.38□□□□□ -0.43
TCF4-209ENST00000544241 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.38□□□□□ -0.43
TCF4-209ENST00000544241 IFT57Q9NWB7 429 aa12.38□□□□□ -0.43
TCF4-209ENST00000544241 NRXN1Q9ULB1 1477 aa12.38□□□□□ -0.43
TCF4-209ENST00000544241 SSH2Q76I76 1423 aa12.38□□□□□ -0.43
TCF4-209ENST00000544241 HTATSF1O43719 755 aaKnown RBP12.37□□□□□ -0.43
TCF4-209ENST00000544241 FCHSD2O94868 740 aa12.37□□□□□ -0.43
TCF4-209ENST00000544241 GNAI1P63096 354 aa12.37□□□□□ -0.43
TCF4-209ENST00000544241 ANKRD44Q8N8A2 993 aa12.37□□□□□ -0.43
TCF4-209ENST00000544241 CHAMP1Q96JM3 812 aa12.37□□□□□ -0.43
TCF4-209ENST00000544241 EVC2Q86UK5 1308 aa12.37□□□□□ -0.43
TCF4-209ENST00000544241 FAM135BQ49AJ0 1406 aa12.37□□□□□ -0.43
TCF4-209ENST00000544241 OSBPL3Q9H4L5 887 aa12.37□□□□□ -0.43
TCF4-209ENST00000544241 ZCCHC11Q5TAX3 1644 aaKnown RBP12.37□□□□□ -0.43
TCF4-209ENST00000544241 DIAPH1O60610 1272 aaKnown RBP12.36□□□□□ -0.43
TCF4-209ENST00000544241 HMMRO75330 724 aa12.36□□□□□ -0.43
TCF4-209ENST00000544241 FAM200AQ8TCP9 573 aa12.36□□□□□ -0.43
TCF4-209ENST00000544241 IL17RAQ96F46 866 aa12.36□□□□□ -0.43
TCF4-209ENST00000544241 FUCA2Q9BTY2 467 aa12.36□□□□□ -0.43
TCF4-209ENST00000544241 ADGRF5Q8IZF2 1346 aa12.36□□□□□ -0.43
TCF4-209ENST00000544241 SPC24Q8NBT2 197 aa12.36□□□□□ -0.43
TCF4-209ENST00000544241 C16orf45Q96MC5 204 aaPredicted RBP12.36□□□□□ -0.43
TCF4-209ENST00000544241 GDPD2Q9HCC8 539 aa12.36□□□□□ -0.43
TCF4-209ENST00000544241 ASXL2Q76L83 1435 aa12.36□□□□□ -0.43
TCF4-209ENST00000544241 CCDC171Q6TFL3 1326 aa12.36□□□□□ -0.43
TCF4-209ENST00000544241 NEMFO60524 1076 aa12.35□□□□□ -0.43
TCF4-209ENST00000544241 QRICH2Q9H0J4 1663 aa12.35□□□□□ -0.43
TCF4-209ENST00000544241 RPAP1Q9BWH6 1393 aaPredicted RBP12.35□□□□□ -0.43
TCF4-209ENST00000544241 ZBTB22O15209 634 aa12.35□□□□□ -0.43
TCF4-209ENST00000544241 ZSCAN22P10073 491 aaPredicted RBP12.35□□□□□ -0.43
TCF4-209ENST00000544241 IRX3P78415 501 aaPredicted RBP12.35□□□□□ -0.43
TCF4-209ENST00000544241 DRC7Q8IY82 874 aa12.35□□□□□ -0.43
TCF4-209ENST00000544241 SRCIN1Q9C0H9 1055 aa12.35□□□□□ -0.43
TCF4-209ENST00000544241 COL3A1P02461 1466 aaPredicted RBP12.34□□□□□ -0.43
TCF4-209ENST00000544241 ZC3H13Q5T200 1668 aaKnown RBP12.34□□□□□ -0.43
TCF4-209ENST00000544241 KIF2AO00139 706 aaPredicted RBP12.34□□□□□ -0.43
TCF4-209ENST00000544241 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
TCF4-209ENST00000544241 BMS1Q14692 1282 aaKnown RBP12.34□□□□□ -0.43
TCF4-209ENST00000544241 TPD52L1Q16890 204 aaPredicted RBP12.34□□□□□ -0.43
TCF4-209ENST00000544241 TEX35Q5T0J7 233 aa12.34□□□□□ -0.43
TCF4-209ENST00000544241 ERO1AQ96HE7 468 aa12.34□□□□□ -0.43
TCF4-209ENST00000544241 FAM53CQ9NYF3 392 aa12.34□□□□□ -0.43
TCF4-209ENST00000544241 SPAG9O60271 1321 aaKnown RBP12.34□□□□□ -0.43
TCF4-209ENST00000544241 CEP135Q66GS9 1140 aa12.34□□□□□ -0.43
TCF4-209ENST00000544241 DEPDC5O75140 1603 aa12.33□□□□□ -0.43
TCF4-209ENST00000544241 KIF1BO60333 1816 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms