RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 PLEKHO1Q53GL0 409 aaPredicted RBP15.69■□□□□ 0.1
DDB1-223ENST00000543658 CDCA7Q9BWT1 371 aaPredicted RBP15.69■□□□□ 0.1
DDB1-223ENST00000543658 GLI3P10071 1580 aa15.68■□□□□ 0.1
DDB1-223ENST00000543658 AMOTQ4VCS5 1084 aa15.68■□□□□ 0.1
DDB1-223ENST00000543658 GAS2L2Q8NHY3 880 aa15.68■□□□□ 0.1
DDB1-223ENST00000543658 YTHDC1Q96MU7 727 aaKnown RBP15.68■□□□□ 0.1
DDB1-223ENST00000543658 SHANK3Q9BYB0 1731 aa15.68■□□□□ 0.1
DDB1-223ENST00000543658 LRRC37A3O60309 1634 aa15.68■□□□□ 0.1
DDB1-223ENST00000543658 OVOS2A0A0G2JMS6 1433 aa15.68■□□□□ 0.1
DDB1-223ENST00000543658 HNRNPUQ00839 825 aaKnown RBP eCLIP15.67■□□□□ 0.1
DDB1-223ENST00000543658 PLEKHF1Q96S99 279 aa15.67■□□□□ 0.1
DDB1-223ENST00000543658 QTRT2Q9H974 415 aaKnown RBP15.67■□□□□ 0.1
DDB1-223ENST00000543658 SPG7Q9UQ90 795 aa15.67■□□□□ 0.1
DDB1-223ENST00000543658 C1orf141Q5JVX7 400 aa15.66■□□□□ 0.1
DDB1-223ENST00000543658 GJD4Q96KN9 370 aaPredicted RBP15.66■□□□□ 0.1
DDB1-223ENST00000543658 THSD7AQ9UPZ6 1657 aa15.65■□□□□ 0.1
DDB1-223ENST00000543658 APAF1O14727 1248 aa15.65■□□□□ 0.1
DDB1-223ENST00000543658 NEUROD2Q15784 382 aa15.65■□□□□ 0.1
DDB1-223ENST00000543658 BARGINQ6ZT62 677 aa15.65■□□□□ 0.1
DDB1-223ENST00000543658 DISP2A7MBM2 1401 aa15.65■□□□□ 0.1
DDB1-223ENST00000543658 KAT6BQ8WYB5 2073 aa15.64■□□□□ 0.09
DDB1-223ENST00000543658 LMOD3Q0VAK6 560 aa15.64■□□□□ 0.09
DDB1-223ENST00000543658 NFE2L2Q16236 605 aa15.64■□□□□ 0.09
DDB1-223ENST00000543658 FAM98CQ17RN3 349 aaKnown RBP15.64■□□□□ 0.09
DDB1-223ENST00000543658 TNS2Q63HR2 1409 aa15.64■□□□□ 0.09
DDB1-223ENST00000543658 ZNF530Q6P9A1 599 aaPredicted RBP15.64■□□□□ 0.09
DDB1-223ENST00000543658 NGEFQ8N5V2 710 aa15.64■□□□□ 0.09
DDB1-223ENST00000543658 PCDH11XQ9BZA7 1347 aa15.64■□□□□ 0.09
DDB1-223ENST00000543658 PCDH11YQ9BZA8 1340 aa15.64■□□□□ 0.09
DDB1-223ENST00000543658 SCN11AQ9UI33 1791 aa15.63■□□□□ 0.09
DDB1-223ENST00000543658 TMPOP42166 694 aaKnown RBP15.63■□□□□ 0.09
DDB1-223ENST00000543658 ZCRB1Q8TBF4 217 aaKnown RBP15.63■□□□□ 0.09
DDB1-223ENST00000543658 RTF1Q92541 710 aaKnown RBP15.63■□□□□ 0.09
DDB1-223ENST00000543658 PHACTR3Q96KR7 559 aa15.63■□□□□ 0.09
DDB1-223ENST00000543658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.63■□□□□ 0.09
DDB1-223ENST00000543658 RRP7AQ9Y3A4 280 aaKnown RBP15.63■□□□□ 0.09
DDB1-223ENST00000543658 SALL2Q9Y467 1007 aaPredicted RBP15.63■□□□□ 0.09
DDB1-223ENST00000543658 EXOC5O00471 708 aa15.62■□□□□ 0.09
DDB1-223ENST00000543658 RIPK4P57078 832 aa15.62■□□□□ 0.09
DDB1-223ENST00000543658 DDB1Q16531 1140 aa15.62■□□□□ 0.09
DDB1-223ENST00000543658 MTHFSDQ2M296 383 aaKnown RBP15.62■□□□□ 0.09
DDB1-223ENST00000543658 MAP3K5Q99683 1374 aa15.62■□□□□ 0.09
DDB1-223ENST00000543658 BRWD3Q6RI45 1802 aa15.61■□□□□ 0.09
DDB1-223ENST00000543658 SENP3-EIF4A1A0A087X0R7 540 aa15.61■□□□□ 0.09
DDB1-223ENST00000543658 RBM6P78332 1123 aaKnown RBP15.61■□□□□ 0.09
DDB1-223ENST00000543658 GNAT3A8MTJ3 354 aa15.6■□□□□ 0.09
DDB1-223ENST00000543658 AKAP4Q5JQC9 854 aa15.6■□□□□ 0.09
DDB1-223ENST00000543658 IFNL2Q8IZJ0 200 aa15.6■□□□□ 0.09
DDB1-223ENST00000543658 HSP90AB1P08238 724 aaKnown RBP15.59■□□□□ 0.09
DDB1-223ENST00000543658 RXRBP28702 533 aa15.59■□□□□ 0.09
DDB1-223ENST00000543658 DDX54Q8TDD1 881 aaKnown RBP15.59■□□□□ 0.09
DDB1-223ENST00000543658 DOT1LQ8TEK3 1739 aa15.59■□□□□ 0.09
DDB1-223ENST00000543658 PDE3BQ13370 1112 aa15.58■□□□□ 0.08
DDB1-223ENST00000543658 HTATSF1O43719 755 aaKnown RBP15.57■□□□□ 0.08
DDB1-223ENST00000543658 PHKG2P15735 406 aa15.57■□□□□ 0.08
DDB1-223ENST00000543658 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
DDB1-223ENST00000543658 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
DDB1-223ENST00000543658 ZBED9Q6R2W3 1325 aa15.57■□□□□ 0.08
DDB1-223ENST00000543658 ITGB4P16144 1822 aa15.57■□□□□ 0.08
DDB1-223ENST00000543658 CCDC27Q2M243 656 aa15.56■□□□□ 0.08
DDB1-223ENST00000543658 ADAMTS7Q9UKP4 1686 aa15.56■□□□□ 0.08
DDB1-223ENST00000543658 SIPA1L3O60292 1781 aaPredicted RBP15.55■□□□□ 0.08
DDB1-223ENST00000543658 SEPT12Q8IYM1 358 aa15.55■□□□□ 0.08
DDB1-223ENST00000543658 TOGARAM1Q9Y4F4 1720 aa15.54■□□□□ 0.08
DDB1-223ENST00000543658 CYP27B1O15528 508 aa15.54■□□□□ 0.08
DDB1-223ENST00000543658 DCAF5Q96JK2 942 aa15.54■□□□□ 0.08
DDB1-223ENST00000543658 ONECUT3O60422 494 aaPredicted RBP15.53■□□□□ 0.08
DDB1-223ENST00000543658 TEFQ10587 303 aa15.53■□□□□ 0.08
DDB1-223ENST00000543658 MPRIPQ6WCQ1 1025 aa15.53■□□□□ 0.08
DDB1-223ENST00000543658 MCM10Q7L590 875 aa15.53■□□□□ 0.08
DDB1-223ENST00000543658 WWC1Q8IX03 1113 aa15.53■□□□□ 0.08
DDB1-223ENST00000543658 RGS17Q9UGC6 210 aaPredicted RBP15.53■□□□□ 0.08
DDB1-223ENST00000543658 SBF2Q86WG5 1849 aa15.52■□□□□ 0.08
DDB1-223ENST00000543658 RNMTO43148 476 aaKnown RBP15.52■□□□□ 0.08
DDB1-223ENST00000543658 DCTN1Q14203 1278 aa15.52■□□□□ 0.08
DDB1-223ENST00000543658 POTEAQ6S8J7 498 aa15.52■□□□□ 0.08
DDB1-223ENST00000543658 ILDR2Q71H61 639 aa15.52■□□□□ 0.08
DDB1-223ENST00000543658 TRIM35Q9UPQ4 493 aa15.52■□□□□ 0.08
DDB1-223ENST00000543658 RGS12O14924 1447 aa15.51■□□□□ 0.07
DDB1-223ENST00000543658 GOLGA2Q08379 1002 aa15.51■□□□□ 0.07
DDB1-223ENST00000543658 WDR63Q8IWG1 891 aa15.51■□□□□ 0.07
DDB1-223ENST00000543658 KDM6AO15550 1401 aaPredicted RBP15.51■□□□□ 0.07
DDB1-223ENST00000543658 KDM3BQ7LBC6 1761 aa15.5■□□□□ 0.07
DDB1-223ENST00000543658 KRT27Q7Z3Y8 459 aa15.5■□□□□ 0.07
DDB1-223ENST00000543658 THUMPD2Q9BTF0 503 aaKnown RBP15.5■□□□□ 0.07
DDB1-223ENST00000543658 LAS1LQ9Y4W2 734 aaKnown RBP15.5■□□□□ 0.07
DDB1-223ENST00000543658 MRC1P22897 1456 aa15.5■□□□□ 0.07
DDB1-223ENST00000543658 NHSQ6T4R5 1651 aa15.5■□□□□ 0.07
DDB1-223ENST00000543658 CABP4P57796 275 aa15.49■□□□□ 0.07
DDB1-223ENST00000543658 NKX1-1Q15270 411 aaPredicted RBP15.49■□□□□ 0.07
DDB1-223ENST00000543658 MARCH10Q8NA82 808 aaPredicted RBP15.49■□□□□ 0.07
DDB1-223ENST00000543658 CEMIPQ8WUJ3 1361 aa15.49■□□□□ 0.07
DDB1-223ENST00000543658 IL16Q14005 1332 aa15.48■□□□□ 0.07
DDB1-223ENST00000543658 GNAI1P63096 354 aa15.48■□□□□ 0.07
DDB1-223ENST00000543658 IL17REQ8NFR9 667 aa15.48■□□□□ 0.07
DDB1-223ENST00000543658 MYH16Q9H6N6 1097 aa15.48■□□□□ 0.07
DDB1-223ENST00000543658 LGR6Q9HBX8 967 aa15.48■□□□□ 0.07
DDB1-223ENST00000543658 ZNF521Q96K83 1311 aa15.47■□□□□ 0.07
DDB1-223ENST00000543658 ERVV-2B6SEH9 535 aa15.47■□□□□ 0.07
DDB1-223ENST00000543658 E9PSI1 815 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms