RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 BTAF1O14981 1849 aa9.84□□□□□ -0.83
NUP43-206ENST00000543637 MYOM1P52179 1685 aa9.84□□□□□ -0.83
NUP43-206ENST00000543637 SLC15A2Q16348 729 aa9.84□□□□□ -0.83
NUP43-206ENST00000543637 NBPF6Q5VWK0 638 aa9.84□□□□□ -0.83
NUP43-206ENST00000543637 PROM2Q8N271 834 aa9.84□□□□□ -0.83
NUP43-206ENST00000543637 NBPF4Q96M43 638 aa9.84□□□□□ -0.83
NUP43-206ENST00000543637 CARD14Q9BXL6 1004 aa9.84□□□□□ -0.83
NUP43-206ENST00000543637 FLT4P35916 1363 aa9.84□□□□□ -0.83
NUP43-206ENST00000543637 NSD3Q9BZ95 1437 aa9.83□□□□□ -0.84
NUP43-206ENST00000543637 HSP90AB2PQ58FF8 381 aa9.83□□□□□ -0.84
NUP43-206ENST00000543637 INSRP06213 1382 aa9.83□□□□□ -0.84
NUP43-206ENST00000543637 PRIM1P49642 420 aaKnown RBP9.82□□□□□ -0.84
NUP43-206ENST00000543637 USHBP1Q8N6Y0 703 aa9.82□□□□□ -0.84
NUP43-206ENST00000543637 PANK3Q9H999 370 aa9.82□□□□□ -0.84
NUP43-206ENST00000543637 TNNT2P45379 298 aaPredicted RBP9.81□□□□□ -0.84
NUP43-206ENST00000543637 SLC27A3Q5K4L6 730 aa9.81□□□□□ -0.84
NUP43-206ENST00000543637 SPG7Q9UQ90 795 aa9.81□□□□□ -0.84
NUP43-206ENST00000543637 EMILIN1Q9Y6C2 1016 aa9.81□□□□□ -0.84
NUP43-206ENST00000543637 ANKRD26Q9UPS8 1709 aa9.81□□□□□ -0.84
NUP43-206ENST00000543637 ATF5Q9Y2D1 282 aaPredicted RBP9.8□□□□□ -0.84
NUP43-206ENST00000543637 KNSTRNQ9Y448 316 aa9.8□□□□□ -0.84
NUP43-206ENST00000543637 WASHC2AQ641Q2 1341 aa9.8□□□□□ -0.84
NUP43-206ENST00000543637 PCDH11XQ9BZA7 1347 aa9.8□□□□□ -0.84
NUP43-206ENST00000543637 PCDH11YQ9BZA8 1340 aa9.8□□□□□ -0.84
NUP43-206ENST00000543637 DOT1LQ8TEK3 1739 aa9.79□□□□□ -0.84
NUP43-206ENST00000543637 ZBTB7AO95365 584 aa9.79□□□□□ -0.84
NUP43-206ENST00000543637 MORC1Q86VD1 984 aa9.79□□□□□ -0.84
NUP43-206ENST00000543637 ANO8Q9HCE9 1232 aaPredicted RBP9.79□□□□□ -0.84
NUP43-206ENST00000543637 MTFR1LQ9H019 292 aa9.78□□□□□ -0.84
NUP43-206ENST00000543637 TFCP2L1Q9NZI6 479 aa9.78□□□□□ -0.84
NUP43-206ENST00000543637 POLKQ9UBT6 870 aa9.78□□□□□ -0.84
NUP43-206ENST00000543637 SHANK3Q9BYB0 1731 aa9.78□□□□□ -0.84
NUP43-206ENST00000543637 CASZ1Q86V15 1759 aa9.78□□□□□ -0.84
NUP43-206ENST00000543637 ITGB4P16144 1822 aa9.77□□□□□ -0.84
NUP43-206ENST00000543637 LY75O60449 1722 aa9.77□□□□□ -0.85
NUP43-206ENST00000543637 MPRIPQ6WCQ1 1025 aa9.77□□□□□ -0.85
NUP43-206ENST00000543637 SLC16A10Q8TF71 515 aa9.77□□□□□ -0.85
NUP43-206ENST00000543637 SMARCC1Q92922 1105 aaPredicted RBP9.77□□□□□ -0.85
NUP43-206ENST00000543637 EYA1Q99502 592 aa9.77□□□□□ -0.85
NUP43-206ENST00000543637 CCNL1Q9UK58 526 aaPredicted RBP9.77□□□□□ -0.85
NUP43-206ENST00000543637 MEGF6O75095 1541 aa9.77□□□□□ -0.85
NUP43-206ENST00000543637 NSD2O96028 1365 aa9.76□□□□□ -0.85
NUP43-206ENST00000543637 POLD1P28340 1107 aa9.76□□□□□ -0.85
NUP43-206ENST00000543637 IFNL2Q8IZJ0 200 aa9.76□□□□□ -0.85
NUP43-206ENST00000543637 LRRC4BQ9NT99 713 aa9.76□□□□□ -0.85
NUP43-206ENST00000543637 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.76□□□□□ -0.856e-9■□□□□ 8.3
NUP43-206ENST00000543637 PDGFDQ9GZP0 370 aaPredicted RBP9.75□□□□□ -0.85
NUP43-206ENST00000543637 QSER1Q2KHR3 1735 aa9.75□□□□□ -0.85
NUP43-206ENST00000543637 CYP27B1O15528 508 aa9.74□□□□□ -0.85
NUP43-206ENST00000543637 KCNQ4P56696 695 aa9.74□□□□□ -0.85
NUP43-206ENST00000543637 EIF4A2Q14240 407 aaKnown RBP9.74□□□□□ -0.85
NUP43-206ENST00000543637 PLEKHO1Q53GL0 409 aaPredicted RBP9.74□□□□□ -0.85
NUP43-206ENST00000543637 FLAD1Q8NFF5 587 aa9.74□□□□□ -0.85
NUP43-206ENST00000543637 AKT1S1Q96B36 256 aa9.74□□□□□ -0.85
NUP43-206ENST00000543637 ARXQ96QS3 562 aa9.74□□□□□ -0.85
NUP43-206ENST00000543637 PKD1L3Q7Z443 1732 aa9.73□□□□□ -0.85
NUP43-206ENST00000543637 HSP90AB1P08238 724 aaKnown RBP9.73□□□□□ -0.85
NUP43-206ENST00000543637 NKX1-1Q15270 411 aaPredicted RBP9.73□□□□□ -0.85
NUP43-206ENST00000543637 ZNF827Q17R98 1081 aa9.73□□□□□ -0.85
NUP43-206ENST00000543637 AMOTQ4VCS5 1084 aa9.73□□□□□ -0.85
NUP43-206ENST00000543637 TMOD3Q9NYL9 352 aa9.73□□□□□ -0.85
NUP43-206ENST00000543637 TAF1LQ8IZX4 1826 aa9.72□□□□□ -0.85
NUP43-206ENST00000543637 PTGER2P43116 358 aa9.72□□□□□ -0.85
NUP43-206ENST00000543637 KLHL34Q8N239 644 aa9.72□□□□□ -0.85
NUP43-206ENST00000543637 SYT17Q9BSW7 474 aa9.72□□□□□ -0.85
NUP43-206ENST00000543637 FHDC1Q9C0D6 1143 aaPredicted RBP9.72□□□□□ -0.85
NUP43-206ENST00000543637 PAPPAQ13219 1627 aa9.71□□□□□ -0.85
NUP43-206ENST00000543637 C5P01031 1676 aa9.71□□□□□ -0.85
NUP43-206ENST00000543637 PHKG2P15735 406 aa9.71□□□□□ -0.86
NUP43-206ENST00000543637 YY1P25490 414 aa9.71□□□□□ -0.86
NUP43-206ENST00000543637 C1orf141Q5JVX7 400 aa9.71□□□□□ -0.86
NUP43-206ENST00000543637 AK7Q96M32 723 aa9.71□□□□□ -0.86
NUP43-206ENST00000543637 PALLDQ8WX93 1383 aa9.71□□□□□ -0.86
NUP43-206ENST00000543637 TUBGCP6Q96RT7 1819 aa9.7□□□□□ -0.86
NUP43-206ENST00000543637 ERVV-2B6SEH9 535 aa9.7□□□□□ -0.86
NUP43-206ENST00000543637 PIGBQ92521 554 aa9.7□□□□□ -0.86
NUP43-206ENST00000543637 KIF7Q2M1P5 1343 aa9.7□□□□□ -0.86
NUP43-206ENST00000543637 PNPLA7Q6ZV29 1317 aa9.7□□□□□ -0.86
NUP43-206ENST00000543637 ATP6V1AP38606 617 aa9.69□□□□□ -0.86
NUP43-206ENST00000543637 MTHFSP49914 203 aa9.69□□□□□ -0.86
NUP43-206ENST00000543637 CABP4P57796 275 aa9.69□□□□□ -0.86
NUP43-206ENST00000543637 CNGB1Q14028 1251 aaPredicted RBP9.69□□□□□ -0.86
NUP43-206ENST00000543637 NCAPD2Q15021 1401 aa9.69□□□□□ -0.86
NUP43-206ENST00000543637 CC2D1BQ5T0F9 858 aaKnown RBP9.69□□□□□ -0.86
NUP43-206ENST00000543637 ZNF530Q6P9A1 599 aaPredicted RBP9.69□□□□□ -0.86
NUP43-206ENST00000543637 IGSF1Q8N6C5 1336 aa9.69□□□□□ -0.86
NUP43-206ENST00000543637 DCAF5Q96JK2 942 aa9.69□□□□□ -0.86
NUP43-206ENST00000543637 PLEKHG2Q9H7P9 1386 aa9.69□□□□□ -0.86
NUP43-206ENST00000543637 CHD4Q14839 1912 aa9.68□□□□□ -0.86
NUP43-206ENST00000543637 GPR162Q16538 588 aa9.68□□□□□ -0.86
NUP43-206ENST00000543637 SULT6B1Q6IMI4 303 aa9.68□□□□□ -0.86
NUP43-206ENST00000543637 COL23A1Q86Y22 540 aaPredicted RBP9.68□□□□□ -0.86
NUP43-206ENST00000543637 SGIP1Q9BQI5 828 aa9.68□□□□□ -0.86
NUP43-206ENST00000543637 RBM42Q9BTD8 480 aaKnown RBP9.68□□□□□ -0.86
NUP43-206ENST00000543637 TOGARAM1Q9Y4F4 1720 aa9.68□□□□□ -0.86
NUP43-206ENST00000543637 LOC102724428A0A0B4J2F2 783 aa9.67□□□□□ -0.86
NUP43-206ENST00000543637 DIAPH1O60610 1272 aaKnown RBP9.67□□□□□ -0.86
NUP43-206ENST00000543637 SIK1P57059 783 aa9.67□□□□□ -0.86
NUP43-206ENST00000543637 AMER1Q5JTC6 1135 aaPredicted RBP9.67□□□□□ -0.86
NUP43-206ENST00000543637 PELP1Q8IZL8 1130 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms