RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 COL25A1Q9BXS0 654 aaPredicted RBP6.83□□□□□ -1.32
GTF2H3-213ENST00000543415 NDUFB9Q9Y6M9 179 aa6.83□□□□□ -1.32
GTF2H3-213ENST00000543415 ADD1P35611 737 aaKnown RBP6.82□□□□□ -1.32
GTF2H3-213ENST00000543415 KRT76Q01546 638 aa6.82□□□□□ -1.32
GTF2H3-213ENST00000543415 TBC1D2BQ9UPU7 963 aa6.82□□□□□ -1.32
GTF2H3-213ENST00000543415 CDC14CA4D256 554 aa6.81□□□□□ -1.32
GTF2H3-213ENST00000543415 ARID3CA6NKF2 412 aa6.81□□□□□ -1.32
GTF2H3-213ENST00000543415 MCCD1P59942 119 aaPredicted RBP6.81□□□□□ -1.32
GTF2H3-213ENST00000543415 KCNMA1Q12791 1236 aa6.81□□□□□ -1.32
GTF2H3-213ENST00000543415 MCM6Q14566 821 aa6.81□□□□□ -1.32
GTF2H3-213ENST00000543415 VWA5B2Q8N398 1253 aa6.81□□□□□ -1.32
GTF2H3-213ENST00000543415 RNF20Q5VTR2 975 aa6.8□□□□□ -1.32
GTF2H3-213ENST00000543415 LYSMD3Q7Z3D4 306 aa6.8□□□□□ -1.32
GTF2H3-213ENST00000543415 KDF1Q8NAX2 398 aaPredicted RBP6.8□□□□□ -1.32
GTF2H3-213ENST00000543415 CLUAP1Q96AJ1 413 aa6.8□□□□□ -1.32
GTF2H3-213ENST00000543415 CYLDQ9NQC7 956 aa6.8□□□□□ -1.32
GTF2H3-213ENST00000543415 PCDHB9Q9Y5E1 797 aa6.8□□□□□ -1.32
GTF2H3-213ENST00000543415 SENP3-EIF4A1A0A087X0R7 540 aa6.79□□□□□ -1.32
GTF2H3-213ENST00000543415 RNF225M0QZC1 329 aaPredicted RBP6.79□□□□□ -1.32
GTF2H3-213ENST00000543415 APBB1O00213 710 aa6.79□□□□□ -1.32
GTF2H3-213ENST00000543415 RNF144AP50876 292 aaPredicted RBP6.79□□□□□ -1.32
GTF2H3-213ENST00000543415 IRF5Q13568 498 aa6.79□□□□□ -1.32
GTF2H3-213ENST00000543415 FOXD4L5Q5VV16 416 aaPredicted RBP6.79□□□□□ -1.32
GTF2H3-213ENST00000543415 ZNF330Q9Y3S2 320 aaPredicted RBP6.79□□□□□ -1.32
GTF2H3-213ENST00000543415 ATP5J2-PTCD1G3V325 749 aa6.78□□□□□ -1.32
GTF2H3-213ENST00000543415 RAD21O60216 631 aa6.78□□□□□ -1.32
GTF2H3-213ENST00000543415 GIGYF1O75420 1035 aaPredicted RBP6.78□□□□□ -1.32
GTF2H3-213ENST00000543415 SLURP2P0DP57 97 aa6.78□□□□□ -1.32
GTF2H3-213ENST00000543415 GPC1P35052 558 aa6.78□□□□□ -1.32
GTF2H3-213ENST00000543415 NR1H3Q13133 447 aa6.78□□□□□ -1.32
GTF2H3-213ENST00000543415 RNFT1Q5M7Z0 435 aa6.78□□□□□ -1.32
GTF2H3-213ENST00000543415 SVOPQ8N4V2 548 aa6.77□□□□□ -1.33
GTF2H3-213ENST00000543415 GMCL1Q96IK5 515 aa6.77□□□□□ -1.33
GTF2H3-213ENST00000543415 GDPD2Q9HCC8 539 aa6.77□□□□□ -1.33
GTF2H3-213ENST00000543415 ADAMTS8Q9UP79 889 aa6.77□□□□□ -1.33
GTF2H3-213ENST00000543415 A6NJR5 290 aa6.76□□□□□ -1.33
GTF2H3-213ENST00000543415 ZNF385CQ66K41 422 aaPredicted RBP6.76□□□□□ -1.33
GTF2H3-213ENST00000543415 CC2D2BQ6DHV5 1058 aa6.76□□□□□ -1.33
GTF2H3-213ENST00000543415 ERVK-9P63128 1117 aa6.75□□□□□ -1.33
GTF2H3-213ENST00000543415 PRICKLE2Q7Z3G6 844 aa6.75□□□□□ -1.33
GTF2H3-213ENST00000543415 TMEM151AQ8N4L1 468 aa6.75□□□□□ -1.33
GTF2H3-213ENST00000543415 C1orf115Q9H7X2 142 aa6.75□□□□□ -1.33
GTF2H3-213ENST00000543415 TRAK2O60296 914 aa6.74□□□□□ -1.33
GTF2H3-213ENST00000543415 ABL2P42684 1182 aa6.74□□□□□ -1.33
GTF2H3-213ENST00000543415 SRSF11Q05519 484 aaKnown RBP6.74□□□□□ -1.33
GTF2H3-213ENST00000543415 FOXR1Q6PIV2 292 aa6.74□□□□□ -1.33
GTF2H3-213ENST00000543415 CYP2U1Q7Z449 544 aa6.74□□□□□ -1.33
GTF2H3-213ENST00000543415 PROSER2Q86WR7 435 aaPredicted RBP6.74□□□□□ -1.33
GTF2H3-213ENST00000543415 POM121Q96HA1 1249 aa6.74□□□□□ -1.33
GTF2H3-213ENST00000543415 NLRP3Q96P20 1036 aa6.74□□□□□ -1.33
GTF2H3-213ENST00000543415 ESF1Q9H501 851 aaKnown RBP6.74□□□□□ -1.33
GTF2H3-213ENST00000543415 A0A1W2PRU2 124 aa6.73□□□□□ -1.33
GTF2H3-213ENST00000543415 MEN1O00255 615 aa6.73□□□□□ -1.33
GTF2H3-213ENST00000543415 GSK3AP49840 483 aa6.73□□□□□ -1.33
GTF2H3-213ENST00000543415 RASSF7Q02833 373 aa6.73□□□□□ -1.33
GTF2H3-213ENST00000543415 VAC14Q08AM6 782 aa6.73□□□□□ -1.33
GTF2H3-213ENST00000543415 TRIM22Q8IYM9 498 aa6.73□□□□□ -1.33
GTF2H3-213ENST00000543415 COG6Q9Y2V7 657 aa6.73□□□□□ -1.33
GTF2H3-213ENST00000543415 H7C1W4 665 aa6.72□□□□□ -1.33
GTF2H3-213ENST00000543415 ARHGEF15O94989 841 aa6.72□□□□□ -1.33
GTF2H3-213ENST00000543415 GDF11O95390 407 aa6.72□□□□□ -1.33
GTF2H3-213ENST00000543415 ADAMTS2O95450 1211 aa6.72□□□□□ -1.33
GTF2H3-213ENST00000543415 RHOQP17081 205 aa6.72□□□□□ -1.33
GTF2H3-213ENST00000543415 SLC27A3Q5K4L6 730 aa6.72□□□□□ -1.33
GTF2H3-213ENST00000543415 DYRK1BQ9Y463 629 aa6.72□□□□□ -1.33
GTF2H3-213ENST00000543415 MARSP56192 900 aaKnown RBP6.71□□□□□ -1.34
GTF2H3-213ENST00000543415 MAP3K10Q02779 954 aa6.71□□□□□ -1.34
GTF2H3-213ENST00000543415 CLN3Q13286 438 aa6.71□□□□□ -1.34
GTF2H3-213ENST00000543415 WDR44Q5JSH3 913 aa6.71□□□□□ -1.34
GTF2H3-213ENST00000543415 NPM2Q86SE8 214 aaKnown RBP6.71□□□□□ -1.34
GTF2H3-213ENST00000543415 WHAMMQ8TF30 809 aa6.71□□□□□ -1.34
GTF2H3-213ENST00000543415 CUEDC1Q9NWM3 386 aaPredicted RBP6.71□□□□□ -1.34
GTF2H3-213ENST00000543415 ZNF777Q9ULD5 760 aaPredicted RBP6.71□□□□□ -1.34
GTF2H3-213ENST00000543415 PCDHB11Q9Y5F2 797 aa6.71□□□□□ -1.34
GTF2H3-213ENST00000543415 GAS6Q14393 721 aa6.7□□□□□ -1.34
GTF2H3-213ENST00000543415 RIPOR1Q6ZS17 1223 aa6.7□□□□□ -1.34
GTF2H3-213ENST00000543415 CCDC82Q8N4S0 544 aa6.7□□□□□ -1.34
GTF2H3-213ENST00000543415 KCTD17Q8N5Z5 321 aa6.7□□□□□ -1.34
GTF2H3-213ENST00000543415 ZNF837Q96EG3 531 aaPredicted RBP6.7□□□□□ -1.34
GTF2H3-213ENST00000543415 SCARF2Q96GP6 870 aaPredicted RBP6.7□□□□□ -1.34
GTF2H3-213ENST00000543415 GRIP2Q9C0E4 1043 aa6.7□□□□□ -1.34
GTF2H3-213ENST00000543415 ENAMQ9NRM1 1142 aa6.7□□□□□ -1.34
GTF2H3-213ENST00000543415 SPATA31C2B4DYI2 1134 aa6.69□□□□□ -1.34
GTF2H3-213ENST00000543415 SCTRP47872 440 aa6.69□□□□□ -1.34
GTF2H3-213ENST00000543415 POU4F2Q12837 409 aa6.69□□□□□ -1.34
GTF2H3-213ENST00000543415 KANK3Q6NY19 840 aa6.69□□□□□ -1.34
GTF2H3-213ENST00000543415 TRERF1Q96PN7 1200 aa6.69□□□□□ -1.34
GTF2H3-213ENST00000543415 PRM3Q9NNZ6 103 aa6.69□□□□□ -1.34
GTF2H3-213ENST00000543415 MBIPQ9NS73 344 aa6.69□□□□□ -1.34
GTF2H3-213ENST00000543415 CEP126Q9P2H0 1117 aa6.69□□□□□ -1.34
GTF2H3-213ENST00000543415 GNRH1P01148 92 aa6.68□□□□□ -1.34
GTF2H3-213ENST00000543415 DBN1Q16643 649 aa6.68□□□□□ -1.34
GTF2H3-213ENST00000543415 NBPF10Q6P3W6 841 aaKnown RBP6.68□□□□□ -1.34
GTF2H3-213ENST00000543415 LYPD4Q6UWN0 246 aa6.68□□□□□ -1.34
GTF2H3-213ENST00000543415 NBPF15Q8N660 670 aa6.68□□□□□ -1.34
GTF2H3-213ENST00000543415 CCDC85AQ96PX6 553 aaPredicted RBP6.68□□□□□ -1.34
GTF2H3-213ENST00000543415 GAS2L1Q99501 681 aaPredicted RBP6.68□□□□□ -1.34
GTF2H3-213ENST00000543415 OSBPL3Q9H4L5 887 aa6.68□□□□□ -1.34
GTF2H3-213ENST00000543415 MYCP01106 439 aaPredicted RBP6.67□□□□□ -1.34
GTF2H3-213ENST00000543415 CELA2BP08218 269 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms