RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 SEPT12Q8IYM1 358 aa21.18■□□□□ 0.98
TRIM65-204ENST00000543309 USHBP1Q8N6Y0 703 aa21.18■□□□□ 0.98
TRIM65-204ENST00000543309 HNRNPUQ00839 825 aaKnown RBP eCLIP21.17■□□□□ 0.98
TRIM65-204ENST00000543309 TCP11L2Q8N4U5 519 aa21.17■□□□□ 0.98
TRIM65-204ENST00000543309 WNK3Q9BYP7 1800 aa21.15■□□□□ 0.98
TRIM65-204ENST00000543309 APAF1O14727 1248 aa21.15■□□□□ 0.98
TRIM65-204ENST00000543309 ONECUT3O60422 494 aaPredicted RBP21.15■□□□□ 0.98
TRIM65-204ENST00000543309 PHACTR3Q96KR7 559 aa21.15■□□□□ 0.98
TRIM65-204ENST00000543309 CCDC9Q9Y3X0 531 aaKnown RBP21.15■□□□□ 0.98
TRIM65-204ENST00000543309 PKD1L3Q7Z443 1732 aa21.15■□□□□ 0.98
TRIM65-204ENST00000543309 ZBED9Q6R2W3 1325 aa21.14■□□□□ 0.97
TRIM65-204ENST00000543309 RAPGEF4Q8WZA2 1011 aa21.14■□□□□ 0.97
TRIM65-204ENST00000543309 THRAP3Q9Y2W1 955 aaKnown RBP21.14■□□□□ 0.97
TRIM65-204ENST00000543309 MEGF6O75095 1541 aa21.14■□□□□ 0.97
TRIM65-204ENST00000543309 OVOS2A0A0G2JMS6 1433 aa21.13■□□□□ 0.97
TRIM65-204ENST00000543309 SPATA31A1Q5TZJ5 1347 aa21.13■□□□□ 0.97
TRIM65-204ENST00000543309 SPATA31A5Q5VU36 1347 aa21.13■□□□□ 0.97
TRIM65-204ENST00000543309 SPATA31A7Q8IWB4 1347 aa21.13■□□□□ 0.97
TRIM65-204ENST00000543309 NFE2L2Q16236 605 aa21.13■□□□□ 0.97
TRIM65-204ENST00000543309 YTHDC1Q96MU7 727 aaKnown RBP21.13■□□□□ 0.97
TRIM65-204ENST00000543309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.13■□□□□ 0.97
TRIM65-204ENST00000543309 TATP17735 454 aaPredicted RBP21.12■□□□□ 0.97
TRIM65-204ENST00000543309 TMPOP42166 694 aaKnown RBP21.12■□□□□ 0.97
TRIM65-204ENST00000543309 CCDC27Q2M243 656 aa21.12■□□□□ 0.97
TRIM65-204ENST00000543309 AMOTQ4VCS5 1084 aa21.12■□□□□ 0.97
TRIM65-204ENST00000543309 DISP2A7MBM2 1401 aa21.12■□□□□ 0.97
TRIM65-204ENST00000543309 KRT27Q7Z3Y8 459 aa21.11■□□□□ 0.97
TRIM65-204ENST00000543309 DEFB132Q7Z7B7 95 aa21.11■□□□□ 0.97
TRIM65-204ENST00000543309 GAS2L2Q8NHY3 880 aa21.11■□□□□ 0.97
TRIM65-204ENST00000543309 DLG5Q8TDM6 1919 aa21.11■□□□□ 0.97
TRIM65-204ENST00000543309 THSD7AQ9UPZ6 1657 aa21.11■□□□□ 0.97
TRIM65-204ENST00000543309 IL2RBP14784 551 aa21.1■□□□□ 0.97
TRIM65-204ENST00000543309 SF3B2Q13435 895 aaKnown RBP21.1■□□□□ 0.97
TRIM65-204ENST00000543309 PLEKHO1Q53GL0 409 aaPredicted RBP21.1■□□□□ 0.97
TRIM65-204ENST00000543309 CDCA7Q9BWT1 371 aaPredicted RBP21.1■□□□□ 0.97
TRIM65-204ENST00000543309 LRP5O75197 1615 aa21.1■□□□□ 0.97
TRIM65-204ENST00000543309 BARGINQ6ZT62 677 aa21.09■□□□□ 0.97
TRIM65-204ENST00000543309 LMOD3Q0VAK6 560 aa21.08■□□□□ 0.97
TRIM65-204ENST00000543309 MTHFSDQ2M296 383 aaKnown RBP21.08■□□□□ 0.97
TRIM65-204ENST00000543309 RIPK4P57078 832 aa21.07■□□□□ 0.96
TRIM65-204ENST00000543309 SPG7Q9UQ90 795 aa21.07■□□□□ 0.96
TRIM65-204ENST00000543309 ZNF521Q96K83 1311 aa21.06■□□□□ 0.96
TRIM65-204ENST00000543309 A0A0G2JS52 829 aa21.06■□□□□ 0.96
TRIM65-204ENST00000543309 HTATSF1O43719 755 aaKnown RBP21.06■□□□□ 0.96
TRIM65-204ENST00000543309 MYT1Q01538 1121 aa21.06■□□□□ 0.96
TRIM65-204ENST00000543309 FAM98CQ17RN3 349 aaKnown RBP21.06■□□□□ 0.96
TRIM65-204ENST00000543309 USP35Q9P2H5 1018 aa21.06■□□□□ 0.96
TRIM65-204ENST00000543309 RRP7AQ9Y3A4 280 aaKnown RBP21.06■□□□□ 0.96
TRIM65-204ENST00000543309 TNS1Q9HBL0 1735 aaKnown RBP21.05■□□□□ 0.96
TRIM65-204ENST00000543309 MAP3K5Q99683 1374 aa21.05■□□□□ 0.96
TRIM65-204ENST00000543309 SHANK3Q9BYB0 1731 aa21.04■□□□□ 0.96
TRIM65-204ENST00000543309 NEUROD2Q15784 382 aa21.04■□□□□ 0.96
TRIM65-204ENST00000543309 WWC1Q8IX03 1113 aa21.04■□□□□ 0.96
TRIM65-204ENST00000543309 TRIM35Q9UPQ4 493 aa21.04■□□□□ 0.96
TRIM65-204ENST00000543309 ZNF530Q6P9A1 599 aaPredicted RBP21.03■□□□□ 0.96
TRIM65-204ENST00000543309 PCDH11XQ9BZA7 1347 aa21.03■□□□□ 0.96
TRIM65-204ENST00000543309 PCDH11YQ9BZA8 1340 aa21.03■□□□□ 0.96
TRIM65-204ENST00000543309 ADAMTS7Q9UKP4 1686 aa21.02■□□□□ 0.96
TRIM65-204ENST00000543309 GNAT3A8MTJ3 354 aa21.02■□□□□ 0.96
TRIM65-204ENST00000543309 PDE3BQ13370 1112 aa21.02■□□□□ 0.96
TRIM65-204ENST00000543309 AKAP4Q5JQC9 854 aa21.02■□□□□ 0.96
TRIM65-204ENST00000543309 WDR63Q8IWG1 891 aa21.02■□□□□ 0.96
TRIM65-204ENST00000543309 ZCRB1Q8TBF4 217 aaKnown RBP21.02■□□□□ 0.96
TRIM65-204ENST00000543309 LRRC37A3O60309 1634 aa21.02■□□□□ 0.96
TRIM65-204ENST00000543309 TNS2Q63HR2 1409 aa21.02■□□□□ 0.96
TRIM65-204ENST00000543309 BAG6P46379 1132 aa21.01■□□□□ 0.95
TRIM65-204ENST00000543309 C1orf141Q5JVX7 400 aa21.01■□□□□ 0.95
TRIM65-204ENST00000543309 CALD1Q05682 793 aaKnown RBP21■□□□□ 0.95
TRIM65-204ENST00000543309 SALL2Q9Y467 1007 aaPredicted RBP21■□□□□ 0.95
TRIM65-204ENST00000543309 SENP3-EIF4A1A0A087X0R7 540 aa20.99■□□□□ 0.95
TRIM65-204ENST00000543309 IFNL2Q8IZJ0 200 aa20.99■□□□□ 0.95
TRIM65-204ENST00000543309 RTF1Q92541 710 aaKnown RBP20.99■□□□□ 0.95
TRIM65-204ENST00000543309 IL16Q14005 1332 aa20.99■□□□□ 0.95
TRIM65-204ENST00000543309 HSP90AB1P08238 724 aaKnown RBP20.98■□□□□ 0.95
TRIM65-204ENST00000543309 PHKG2P15735 406 aa20.98■□□□□ 0.95
TRIM65-204ENST00000543309 CEMIPQ8WUJ3 1361 aa20.97■□□□□ 0.95
TRIM65-204ENST00000543309 VIRMAQ69YN4 1812 aaKnown RBP20.97■□□□□ 0.95
TRIM65-204ENST00000543309 EXOC5O00471 708 aa20.97■□□□□ 0.95
TRIM65-204ENST00000543309 CYP27B1O15528 508 aa20.97■□□□□ 0.95
TRIM65-204ENST00000543309 GOLGA2Q08379 1002 aa20.97■□□□□ 0.95
TRIM65-204ENST00000543309 SCN11AQ9UI33 1791 aa20.97■□□□□ 0.95
TRIM65-204ENST00000543309 NKX1-1Q15270 411 aaPredicted RBP20.95■□□□□ 0.94
TRIM65-204ENST00000543309 DDB1Q16531 1140 aa20.95■□□□□ 0.94
TRIM65-204ENST00000543309 DCAF5Q96JK2 942 aa20.94■□□□□ 0.94
TRIM65-204ENST00000543309 E9PSI1 815 aa20.93■□□□□ 0.94
TRIM65-204ENST00000543309 FAM182BQ5T319 152 aa20.93■□□□□ 0.94
TRIM65-204ENST00000543309 MCM10Q7L590 875 aa20.93■□□□□ 0.94
TRIM65-204ENST00000543309 KDM6AO15550 1401 aaPredicted RBP20.93■□□□□ 0.94
TRIM65-204ENST00000543309 MRC1P22897 1456 aa20.93■□□□□ 0.94
TRIM65-204ENST00000543309 RNMTO43148 476 aaKnown RBP20.92■□□□□ 0.94
TRIM65-204ENST00000543309 IL17REQ8NFR9 667 aa20.92■□□□□ 0.94
TRIM65-204ENST00000543309 PSDA5PKW4 1024 aaPredicted RBP20.91■□□□□ 0.94
TRIM65-204ENST00000543309 SIPA1L3O60292 1781 aaPredicted RBP20.91■□□□□ 0.94
TRIM65-204ENST00000543309 EN1Q05925 392 aaPredicted RBP20.91■□□□□ 0.94
TRIM65-204ENST00000543309 SLFN5Q08AF3 891 aa20.91■□□□□ 0.94
TRIM65-204ENST00000543309 DCTN1Q14203 1278 aa20.91■□□□□ 0.94
TRIM65-204ENST00000543309 IFT57Q9NWB7 429 aa20.91■□□□□ 0.94
TRIM65-204ENST00000543309 GNAI1P63096 354 aa20.9■□□□□ 0.94
TRIM65-204ENST00000543309 MPRIPQ6WCQ1 1025 aa20.9■□□□□ 0.94
TRIM65-204ENST00000543309 TRMT2AQ8IZ69 625 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms