RNA–Protein interactions for RNA: ENST00000543044.2

AP003108.2-208, humanhuman

TSL 3 BASIC

Gene AP003108.2, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.2-208ENST00000543044 MYOM1P52179 1685 aa12.48□□□□□ -0.41
AP003108.2-208ENST00000543044 NBPF6Q5VWK0 638 aa12.47□□□□□ -0.41
AP003108.2-208ENST00000543044 SLC16A10Q8TF71 515 aa12.47□□□□□ -0.41
AP003108.2-208ENST00000543044 NBPF4Q96M43 638 aa12.47□□□□□ -0.41
AP003108.2-208ENST00000543044 ARXQ96QS3 562 aa12.47□□□□□ -0.41
AP003108.2-208ENST00000543044 MEGF6O75095 1541 aa12.47□□□□□ -0.41
AP003108.2-208ENST00000543044 SMG6Q86US8 1419 aaKnown RBP12.46□□□□□ -0.41
AP003108.2-208ENST00000543044 RAPGEF4Q8WZA2 1011 aa12.46□□□□□ -0.41
AP003108.2-208ENST00000543044 NSD2O96028 1365 aa12.45□□□□□ -0.42
AP003108.2-208ENST00000543044 INSRP06213 1382 aa12.45□□□□□ -0.42
AP003108.2-208ENST00000543044 KIF24Q5T7B8 1368 aa12.45□□□□□ -0.42
AP003108.2-208ENST00000543044 MAP3K5Q99683 1374 aa12.45□□□□□ -0.42
AP003108.2-208ENST00000543044 TFCP2L1Q9NZI6 479 aa12.45□□□□□ -0.42
AP003108.2-208ENST00000543044 TIMELESSQ9UNS1 1208 aa12.45□□□□□ -0.42
AP003108.2-208ENST00000543044 PNPLA7Q6ZV29 1317 aa12.44□□□□□ -0.42
AP003108.2-208ENST00000543044 TATP17735 454 aaPredicted RBP12.44□□□□□ -0.42
AP003108.2-208ENST00000543044 HSP90AB2PQ58FF8 381 aa12.44□□□□□ -0.42
AP003108.2-208ENST00000543044 USHBP1Q8N6Y0 703 aa12.44□□□□□ -0.42
AP003108.2-208ENST00000543044 FLT4P35916 1363 aa12.43□□□□□ -0.42
AP003108.2-208ENST00000543044 KAT6BQ8WYB5 2073 aa12.43□□□□□ -0.42
AP003108.2-208ENST00000543044 KCNQ4P56696 695 aa12.43□□□□□ -0.42
AP003108.2-208ENST00000543044 CARD14Q9BXL6 1004 aa12.43□□□□□ -0.42
AP003108.2-208ENST00000543044 HMGB2P26583 209 aaKnown RBP12.42□□□□□ -0.42
AP003108.2-208ENST00000543044 POLD1P28340 1107 aa12.42□□□□□ -0.42
AP003108.2-208ENST00000543044 CCNL1Q9UK58 526 aaPredicted RBP12.42□□□□□ -0.42
AP003108.2-208ENST00000543044 PCDH11XQ9BZA7 1347 aa12.41□□□□□ -0.42
AP003108.2-208ENST00000543044 PCDH11YQ9BZA8 1340 aa12.41□□□□□ -0.42
AP003108.2-208ENST00000543044 DOT1LQ8TEK3 1739 aa12.4□□□□□ -0.42
AP003108.2-208ENST00000543044 SHANK3Q9BYB0 1731 aa12.4□□□□□ -0.42
AP003108.2-208ENST00000543044 NSD3Q9BZ95 1437 aa12.4□□□□□ -0.42
AP003108.2-208ENST00000543044 RGPD2P0DJD1 1756 aa12.4□□□□□ -0.42
AP003108.2-208ENST00000543044 CLSPNQ9HAW4 1339 aa12.39□□□□□ -0.43
AP003108.2-208ENST00000543044 ZNF784Q8NCA9 323 aaPredicted RBP12.39□□□□□ -0.43
AP003108.2-208ENST00000543044 EMILIN1Q9Y6C2 1016 aa12.39□□□□□ -0.43
AP003108.2-208ENST00000543044 LY75O60449 1722 aa12.39□□□□□ -0.43
AP003108.2-208ENST00000543044 QSER1Q2KHR3 1735 aa12.39□□□□□ -0.43
AP003108.2-208ENST00000543044 GOLGB1Q14789 3259 aaKnown RBP12.38□□□□□ -0.43
AP003108.2-208ENST00000543044 CYP27B1O15528 508 aa12.38□□□□□ -0.43
AP003108.2-208ENST00000543044 GPR162Q16538 588 aa12.38□□□□□ -0.43
AP003108.2-208ENST00000543044 WASHC2AQ641Q2 1341 aa12.37□□□□□ -0.43
AP003108.2-208ENST00000543044 PPM1GO15355 546 aaPredicted RBP12.37□□□□□ -0.43
AP003108.2-208ENST00000543044 MPRIPQ6WCQ1 1025 aa12.37□□□□□ -0.43
AP003108.2-208ENST00000543044 COL23A1Q86Y22 540 aaPredicted RBP12.37□□□□□ -0.43
AP003108.2-208ENST00000543044 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
AP003108.2-208ENST00000543044 KIF20BQ96Q89 1820 aa12.37□□□□□ -0.43
AP003108.2-208ENST00000543044 NCAPD2Q15021 1401 aa12.37□□□□□ -0.43
AP003108.2-208ENST00000543044 PALLDQ8WX93 1383 aa12.36□□□□□ -0.43
AP003108.2-208ENST00000543044 MSH5O43196 834 aa12.36□□□□□ -0.43
AP003108.2-208ENST00000543044 NKX1-1Q15270 411 aaPredicted RBP12.36□□□□□ -0.43
AP003108.2-208ENST00000543044 FLAD1Q8NFF5 587 aa12.36□□□□□ -0.43
AP003108.2-208ENST00000543044 SMARCC1Q92922 1105 aaPredicted RBP12.36□□□□□ -0.43
AP003108.2-208ENST00000543044 SPG7Q9UQ90 795 aa12.36□□□□□ -0.43
AP003108.2-208ENST00000543044 COL24A1Q17RW2 1714 aa12.36□□□□□ -0.43
AP003108.2-208ENST00000543044 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.35□□□□□ -0.43
AP003108.2-208ENST00000543044 NLGN2Q8NFZ4 835 aa12.34□□□□□ -0.43
AP003108.2-208ENST00000543044 EYA1Q99502 592 aa12.34□□□□□ -0.43
AP003108.2-208ENST00000543044 POLKQ9UBT6 870 aa12.34□□□□□ -0.43
AP003108.2-208ENST00000543044 TUBGCP6Q96RT7 1819 aa12.33□□□□□ -0.44
AP003108.2-208ENST00000543044 PIGBQ92521 554 aa12.33□□□□□ -0.44
AP003108.2-208ENST00000543044 PCGF6Q9BYE7 350 aa12.33□□□□□ -0.44
AP003108.2-208ENST00000543044 MSL1Q68DK7 614 aa12.32□□□□□ -0.44
AP003108.2-208ENST00000543044 PELP1Q8IZL8 1130 aaKnown RBP12.32□□□□□ -0.44
AP003108.2-208ENST00000543044 PKD1L3Q7Z443 1732 aa12.31□□□□□ -0.44
AP003108.2-208ENST00000543044 GRIN3BO60391 1043 aa12.31□□□□□ -0.44
AP003108.2-208ENST00000543044 EIF4G2P78344 907 aaKnown RBP eCLIP12.31□□□□□ -0.44
AP003108.2-208ENST00000543044 IFNL2Q8IZJ0 200 aa12.31□□□□□ -0.44
AP003108.2-208ENST00000543044 AK7Q96M32 723 aa12.31□□□□□ -0.44
AP003108.2-208ENST00000543044 POLR3GLQ9BT43 218 aa12.31□□□□□ -0.44
AP003108.2-208ENST00000543044 CD2APQ9Y5K6 639 aa12.31□□□□□ -0.44
AP003108.2-208ENST00000543044 ANKRD26Q9UPS8 1709 aa12.31□□□□□ -0.44
AP003108.2-208ENST00000543044 PLEKHG2Q9H7P9 1386 aa12.3□□□□□ -0.44
AP003108.2-208ENST00000543044 C5P01031 1676 aa12.3□□□□□ -0.44
AP003108.2-208ENST00000543044 LOC102724428A0A0B4J2F2 783 aa12.3□□□□□ -0.44
AP003108.2-208ENST00000543044 PHKG2P15735 406 aa12.3□□□□□ -0.44
AP003108.2-208ENST00000543044 SIK1P57059 783 aa12.3□□□□□ -0.44
AP003108.2-208ENST00000543044 EIF4A2Q14240 407 aaKnown RBP12.3□□□□□ -0.44
AP003108.2-208ENST00000543044 TMOD3Q9NYL9 352 aa12.3□□□□□ -0.44
AP003108.2-208ENST00000543044 CHD4Q14839 1912 aa12.3□□□□□ -0.44
AP003108.2-208ENST00000543044 TOGARAM1Q9Y4F4 1720 aa12.29□□□□□ -0.44
AP003108.2-208ENST00000543044 YBX3P16989 372 aaKnown RBP eCLIP12.29□□□□□ -0.44
AP003108.2-208ENST00000543044 SSFA2P28290 1259 aa12.29□□□□□ -0.44
AP003108.2-208ENST00000543044 TNNT2P45379 298 aaPredicted RBP12.29□□□□□ -0.44
AP003108.2-208ENST00000543044 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.28□□□□□ -0.44
AP003108.2-208ENST00000543044 HSPA5P11021 654 aaKnown RBP12.28□□□□□ -0.44
AP003108.2-208ENST00000543044 C1QTNF8P60827 252 aa12.28□□□□□ -0.44
AP003108.2-208ENST00000543044 AMIGO3Q86WK7 504 aa12.28□□□□□ -0.44
AP003108.2-208ENST00000543044 PANK3Q9H999 370 aa12.28□□□□□ -0.44
AP003108.2-208ENST00000543044 ASAP1Q9ULH1 1129 aa12.28□□□□□ -0.44
AP003108.2-208ENST00000543044 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
AP003108.2-208ENST00000543044 PHF14O94880 888 aa12.27□□□□□ -0.45
AP003108.2-208ENST00000543044 LINC00116Q8NCU8 138 aa12.27□□□□□ -0.45
AP003108.2-208ENST00000543044 IGSF1Q8N6C5 1336 aa12.27□□□□□ -0.45
AP003108.2-208ENST00000543044 MAP2P11137 1827 aaKnown RBP12.26□□□□□ -0.45
AP003108.2-208ENST00000543044 ITGB4P16144 1822 aa12.26□□□□□ -0.45
AP003108.2-208ENST00000543044 TAF1LQ8IZX4 1826 aa12.26□□□□□ -0.45
AP003108.2-208ENST00000543044 ERVV-2B6SEH9 535 aa12.26□□□□□ -0.45
AP003108.2-208ENST00000543044 ATP6V1AP38606 617 aa12.26□□□□□ -0.45
AP003108.2-208ENST00000543044 ITPK1Q13572 414 aa12.26□□□□□ -0.45
AP003108.2-208ENST00000543044 ATG3Q9NT62 314 aa12.26□□□□□ -0.45
AP003108.2-208ENST00000543044 HSP90AB1P08238 724 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms