RNA–Protein interactions for RNA: ENST00000542947.1

SLC6A13-210, Transcript of solute carrier family 6 member 13, humanhuman

TSL 3

Gene SLC6A13, Length 490 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13-210ENST00000542947 FCHSD2O94868 740 aa24.59■■□□□ 1.53
SLC6A13-210ENST00000542947 LRRC37A3O60309 1634 aa24.58■■□□□ 1.53
SLC6A13-210ENST00000542947 PNNQ9H307 717 aaKnown RBP24.58■■□□□ 1.53
SLC6A13-210ENST00000542947 PKD1L3Q7Z443 1732 aa24.56■■□□□ 1.52
SLC6A13-210ENST00000542947 TNS2Q63HR2 1409 aa24.56■■□□□ 1.52
SLC6A13-210ENST00000542947 SEPT12Q8IYM1 358 aa24.56■■□□□ 1.52
SLC6A13-210ENST00000542947 PNISRQ8TF01 805 aaKnown RBP24.56■■□□□ 1.52
SLC6A13-210ENST00000542947 RSPH6AQ9H0K4 717 aa24.56■■□□□ 1.52
SLC6A13-210ENST00000542947 RGS12O14924 1447 aa24.55■■□□□ 1.52
SLC6A13-210ENST00000542947 DDB1Q16531 1140 aa24.55■■□□□ 1.52
SLC6A13-210ENST00000542947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.55■■□□□ 1.52
SLC6A13-210ENST00000542947 EXOC5O00471 708 aa24.54■■□□□ 1.52
SLC6A13-210ENST00000542947 NEFMP07197 916 aa24.54■■□□□ 1.52
SLC6A13-210ENST00000542947 PRKAR2BP31323 418 aa24.54■■□□□ 1.52
SLC6A13-210ENST00000542947 AMOTQ4VCS5 1084 aa24.53■■□□□ 1.52
SLC6A13-210ENST00000542947 ADAMTS8Q9UP79 889 aa24.53■■□□□ 1.52
SLC6A13-210ENST00000542947 SPG7Q9UQ90 795 aa24.53■■□□□ 1.52
SLC6A13-210ENST00000542947 PLEKHO1Q53GL0 409 aaPredicted RBP24.52■■□□□ 1.52
SLC6A13-210ENST00000542947 ZCRB1Q8TBF4 217 aaKnown RBP24.52■■□□□ 1.52
SLC6A13-210ENST00000542947 SHANK3Q9BYB0 1731 aa24.51■■□□□ 1.51
SLC6A13-210ENST00000542947 BRWD3Q6RI45 1802 aa24.51■■□□□ 1.51
SLC6A13-210ENST00000542947 PDE3BQ13370 1112 aa24.5■■□□□ 1.51
SLC6A13-210ENST00000542947 PCDH11XQ9BZA7 1347 aa24.5■■□□□ 1.51
SLC6A13-210ENST00000542947 PCDH11YQ9BZA8 1340 aa24.5■■□□□ 1.51
SLC6A13-210ENST00000542947 MAPK8IP3Q9UPT6 1336 aa24.49■■□□□ 1.51
SLC6A13-210ENST00000542947 GAS2L2Q8NHY3 880 aa24.47■■□□□ 1.51
SLC6A13-210ENST00000542947 PLEKHF1Q96S99 279 aa24.47■■□□□ 1.51
SLC6A13-210ENST00000542947 KRT27Q7Z3Y8 459 aa24.46■■□□□ 1.51
SLC6A13-210ENST00000542947 FAM9BQ8IZU0 186 aa24.46■■□□□ 1.51
SLC6A13-210ENST00000542947 RUNDC1Q96C34 613 aa24.46■■□□□ 1.51
SLC6A13-210ENST00000542947 ZNF530Q6P9A1 599 aaPredicted RBP24.44■■□□□ 1.5
SLC6A13-210ENST00000542947 IFNL2Q8IZJ0 200 aa24.44■■□□□ 1.5
SLC6A13-210ENST00000542947 DDX54Q8TDD1 881 aaKnown RBP24.44■■□□□ 1.5
SLC6A13-210ENST00000542947 PHACTR3Q96KR7 559 aa24.44■■□□□ 1.5
SLC6A13-210ENST00000542947 MTHFSDQ2M296 383 aaKnown RBP24.43■■□□□ 1.5
SLC6A13-210ENST00000542947 C1orf141Q5JVX7 400 aa24.43■■□□□ 1.5
SLC6A13-210ENST00000542947 CCDC146Q8IYE0 955 aa24.42■■□□□ 1.5
SLC6A13-210ENST00000542947 CYP27B1O15528 508 aa24.41■■□□□ 1.5
SLC6A13-210ENST00000542947 PHKG2P15735 406 aa24.41■■□□□ 1.5
SLC6A13-210ENST00000542947 MARCH10Q8NA82 808 aaPredicted RBP24.41■■□□□ 1.5
SLC6A13-210ENST00000542947 HSP90AB1P08238 724 aaKnown RBP24.4■■□□□ 1.5
SLC6A13-210ENST00000542947 AKAP4Q5JQC9 854 aa24.4■■□□□ 1.5
SLC6A13-210ENST00000542947 BCL9O00512 1426 aa24.39■■□□□ 1.5
SLC6A13-210ENST00000542947 NFE2L2Q16236 605 aa24.38■■□□□ 1.49
SLC6A13-210ENST00000542947 MAP3K5Q99683 1374 aa24.38■■□□□ 1.49
SLC6A13-210ENST00000542947 NKX1-1Q15270 411 aaPredicted RBP24.37■■□□□ 1.49
SLC6A13-210ENST00000542947 DLG5Q8TDM6 1919 aa24.37■■□□□ 1.49
SLC6A13-210ENST00000542947 GNAT3A8MTJ3 354 aa24.36■■□□□ 1.49
SLC6A13-210ENST00000542947 FAM196AQ6ZSG2 479 aa24.36■■□□□ 1.49
SLC6A13-210ENST00000542947 TMPOP42166 694 aaKnown RBP24.34■■□□□ 1.49
SLC6A13-210ENST00000542947 DCAF5Q96JK2 942 aa24.34■■□□□ 1.49
SLC6A13-210ENST00000542947 VIRMAQ69YN4 1812 aaKnown RBP24.33■■□□□ 1.49
SLC6A13-210ENST00000542947 DOT1LQ8TEK3 1739 aa24.33■■□□□ 1.49
SLC6A13-210ENST00000542947 APAF1O14727 1248 aa24.33■■□□□ 1.49
SLC6A13-210ENST00000542947 HTATSF1O43719 755 aaKnown RBP24.33■■□□□ 1.49
SLC6A13-210ENST00000542947 LMOD3Q0VAK6 560 aa24.33■■□□□ 1.49
SLC6A13-210ENST00000542947 RTF1Q92541 710 aaKnown RBP24.33■■□□□ 1.49
SLC6A13-210ENST00000542947 SCN11AQ9UI33 1791 aa24.33■■□□□ 1.49
SLC6A13-210ENST00000542947 ADAMTS7Q9UKP4 1686 aa24.33■■□□□ 1.49
SLC6A13-210ENST00000542947 RIPK4P57078 832 aa24.32■■□□□ 1.48
SLC6A13-210ENST00000542947 FAM182BQ5T319 152 aa24.32■■□□□ 1.48
SLC6A13-210ENST00000542947 SBF2Q86WG5 1849 aa24.31■■□□□ 1.48
SLC6A13-210ENST00000542947 KDM6AO15550 1401 aaPredicted RBP24.31■■□□□ 1.48
SLC6A13-210ENST00000542947 KAT6BQ8WYB5 2073 aa24.31■■□□□ 1.48
SLC6A13-210ENST00000542947 TOGARAM1Q9Y4F4 1720 aa24.3■■□□□ 1.48
SLC6A13-210ENST00000542947 MPRIPQ6WCQ1 1025 aa24.3■■□□□ 1.48
SLC6A13-210ENST00000542947 NHSQ6T4R5 1651 aa24.3■■□□□ 1.48
SLC6A13-210ENST00000542947 NCBP3Q53F19 620 aaKnown RBP24.29■■□□□ 1.48
SLC6A13-210ENST00000542947 RRP7AQ9Y3A4 280 aaKnown RBP24.29■■□□□ 1.48
SLC6A13-210ENST00000542947 NEUROD2Q15784 382 aa24.28■■□□□ 1.48
SLC6A13-210ENST00000542947 NGEFQ8N5V2 710 aa24.28■■□□□ 1.48
SLC6A13-210ENST00000542947 ITGB4P16144 1822 aa24.27■■□□□ 1.48
SLC6A13-210ENST00000542947 ERVV-2B6SEH9 535 aa24.27■■□□□ 1.48
SLC6A13-210ENST00000542947 RNMTO43148 476 aaKnown RBP24.27■■□□□ 1.48
SLC6A13-210ENST00000542947 EP400Q96L91 3159 aa24.26■■□□□ 1.47
SLC6A13-210ENST00000542947 CEMIPQ8WUJ3 1361 aa24.26■■□□□ 1.47
SLC6A13-210ENST00000542947 MRC1P22897 1456 aa24.26■■□□□ 1.47
SLC6A13-210ENST00000542947 ACSBG1Q96GR2 724 aa24.25■■□□□ 1.47
SLC6A13-210ENST00000542947 LGR6Q9HBX8 967 aa24.25■■□□□ 1.47
SLC6A13-210ENST00000542947 CCDC27Q2M243 656 aa24.24■■□□□ 1.47
SLC6A13-210ENST00000542947 IL17REQ8NFR9 667 aa24.24■■□□□ 1.47
SLC6A13-210ENST00000542947 PRIM1P49642 420 aaKnown RBP24.23■■□□□ 1.47
SLC6A13-210ENST00000542947 CABP4P57796 275 aa24.23■■□□□ 1.47
SLC6A13-210ENST00000542947 TEFQ10587 303 aa24.23■■□□□ 1.47
SLC6A13-210ENST00000542947 ILDR2Q71H61 639 aa24.23■■□□□ 1.47
SLC6A13-210ENST00000542947 MCM10Q7L590 875 aa24.23■■□□□ 1.47
SLC6A13-210ENST00000542947 SYTL4Q96C24 671 aaPredicted RBP24.23■■□□□ 1.47
SLC6A13-210ENST00000542947 BCL11BQ9C0K0 894 aaPredicted RBP24.22■■□□□ 1.47
SLC6A13-210ENST00000542947 SLC52A2Q9HAB3 445 aa24.22■■□□□ 1.47
SLC6A13-210ENST00000542947 TMOD3Q9NYL9 352 aa24.22■■□□□ 1.47
SLC6A13-210ENST00000542947 TRIM35Q9UPQ4 493 aa24.22■■□□□ 1.47
SLC6A13-210ENST00000542947 DCTN1Q14203 1278 aa24.21■■□□□ 1.47
SLC6A13-210ENST00000542947 SIPA1L3O60292 1781 aaPredicted RBP24.21■■□□□ 1.47
SLC6A13-210ENST00000542947 TRIM37O94972 964 aa24.2■■□□□ 1.46
SLC6A13-210ENST00000542947 BTAF1O14981 1849 aa24.19■■□□□ 1.46
SLC6A13-210ENST00000542947 KCNQ2O43526 872 aa24.19■■□□□ 1.46
SLC6A13-210ENST00000542947 CALD1Q05682 793 aaKnown RBP24.19■■□□□ 1.46
SLC6A13-210ENST00000542947 TNS1Q9HBL0 1735 aaKnown RBP24.18■■□□□ 1.46
SLC6A13-210ENST00000542947 NFATC2IPQ8NCF5 419 aa24.18■■□□□ 1.46
SLC6A13-210ENST00000542947 CCDC125Q86Z20 511 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms