RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 B4GALNT3Q6L9W6 998 aa14.26□□□□□ -0.13
SCG3-202ENST00000542355 MCM10Q7L590 875 aa14.26□□□□□ -0.13
SCG3-202ENST00000542355 MED1Q15648 1581 aaPredicted RBP14.26□□□□□ -0.13
SCG3-202ENST00000542355 SLC4A2P04920 1241 aa14.25□□□□□ -0.13
SCG3-202ENST00000542355 PIAS4Q8N2W9 510 aaPredicted RBP14.25□□□□□ -0.13
SCG3-202ENST00000542355 LTN1O94822 1766 aa14.25□□□□□ -0.13
SCG3-202ENST00000542355 GNAI1P63096 354 aa14.24□□□□□ -0.13
SCG3-202ENST00000542355 GAS2L2Q8NHY3 880 aa14.24□□□□□ -0.13
SCG3-202ENST00000542355 IFT57Q9NWB7 429 aa14.24□□□□□ -0.13
SCG3-202ENST00000542355 RTF1Q92541 710 aaKnown RBP14.24□□□□□ -0.13
SCG3-202ENST00000542355 ZNF853P0CG23 659 aa14.23□□□□□ -0.13
SCG3-202ENST00000542355 CHRNA2Q15822 529 aa14.23□□□□□ -0.13
SCG3-202ENST00000542355 BCL2L13Q9BXK5 485 aa14.23□□□□□ -0.13
SCG3-202ENST00000542355 CT47B1P0C2W7 299 aaPredicted RBP14.23□□□□□ -0.13
SCG3-202ENST00000542355 CRBNQ96SW2 442 aa14.23□□□□□ -0.13
SCG3-202ENST00000542355 MBIPQ9NS73 344 aa14.23□□□□□ -0.13
SCG3-202ENST00000542355 FRAT1Q92837 279 aaPredicted RBP14.22□□□□□ -0.13
SCG3-202ENST00000542355 CANXP27824 592 aaKnown RBP14.22□□□□□ -0.13
SCG3-202ENST00000542355 FBXO3Q9UK99 471 aa14.22□□□□□ -0.13
SCG3-202ENST00000542355 ERBB3P21860 1342 aa14.21□□□□□ -0.13
SCG3-202ENST00000542355 KIAA0232Q92628 1395 aa14.21□□□□□ -0.13
SCG3-202ENST00000542355 CCDC136Q96JN2 1154 aa14.2□□□□□ -0.14
SCG3-202ENST00000542355 PHRF1Q9P1Y6 1649 aaKnown RBP14.2□□□□□ -0.14
SCG3-202ENST00000542355 GNAT3A8MTJ3 354 aa14.2□□□□□ -0.14
SCG3-202ENST00000542355 ELL2O00472 640 aaPredicted RBP14.19□□□□□ -0.14
SCG3-202ENST00000542355 CSB-PGBD3P0DP91 1061 aa14.19□□□□□ -0.14
SCG3-202ENST00000542355 NLRP2Q9NX02 1062 aa14.19□□□□□ -0.14
SCG3-202ENST00000542355 LTBP4Q8N2S1 1624 aa14.19□□□□□ -0.14
SCG3-202ENST00000542355 HTATSF1O43719 755 aaKnown RBP14.19□□□□□ -0.14
SCG3-202ENST00000542355 TSPYL6Q8N831 410 aa14.19□□□□□ -0.14
SCG3-202ENST00000542355 SSH1Q8WYL5 1049 aa14.19□□□□□ -0.14
SCG3-202ENST00000542355 CHL1O00533 1208 aa14.18□□□□□ -0.14
SCG3-202ENST00000542355 IFNLR1Q8IU57 520 aaPredicted RBP14.18□□□□□ -0.14
SCG3-202ENST00000542355 SMC4Q9NTJ3 1288 aa14.18□□□□□ -0.14
SCG3-202ENST00000542355 CPDO75976 1380 aa14.18□□□□□ -0.14
SCG3-202ENST00000542355 PRDM11Q9NQV5 511 aa14.17□□□□□ -0.14
SCG3-202ENST00000542355 MIS18AQ9NYP9 233 aa14.17□□□□□ -0.14
SCG3-202ENST00000542355 VAMP4O75379 141 aa14.17□□□□□ -0.14
SCG3-202ENST00000542355 PLEKHO1Q53GL0 409 aaPredicted RBP14.17□□□□□ -0.14
SCG3-202ENST00000542355 C8orf58Q8NAV2 365 aa14.17□□□□□ -0.14
SCG3-202ENST00000542355 IL17REQ8NFR9 667 aa14.17□□□□□ -0.14
SCG3-202ENST00000542355 DLG5Q8TDM6 1919 aa14.17□□□□□ -0.14
SCG3-202ENST00000542355 PDE3AQ14432 1141 aa14.16□□□□□ -0.14
SCG3-202ENST00000542355 CRB1P82279 1406 aa14.16□□□□□ -0.14
SCG3-202ENST00000542355 MAP3K5Q99683 1374 aa14.16□□□□□ -0.14
SCG3-202ENST00000542355 TWISTNBQ3B726 338 aaPredicted RBP14.16□□□□□ -0.14
SCG3-202ENST00000542355 AMOTQ4VCS5 1084 aa14.16□□□□□ -0.14
SCG3-202ENST00000542355 PANK1Q8TE04 598 aa14.16□□□□□ -0.14
SCG3-202ENST00000542355 ALDH1L2Q3SY69 923 aa14.15□□□□□ -0.15
SCG3-202ENST00000542355 ZNF530Q6P9A1 599 aaPredicted RBP14.15□□□□□ -0.15
SCG3-202ENST00000542355 ZNF428Q96B54 188 aa14.15□□□□□ -0.15
SCG3-202ENST00000542355 TSPYL4Q9UJ04 414 aa14.15□□□□□ -0.15
SCG3-202ENST00000542355 TNNQ9UQP3 1299 aa14.15□□□□□ -0.15
SCG3-202ENST00000542355 NCAPD2Q15021 1401 aa14.14□□□□□ -0.15
SCG3-202ENST00000542355 KRT24Q2M2I5 525 aa14.14□□□□□ -0.15
SCG3-202ENST00000542355 RAPGEF4Q8WZA2 1011 aa14.14□□□□□ -0.15
SCG3-202ENST00000542355 CLUAP1Q96AJ1 413 aa14.14□□□□□ -0.15
SCG3-202ENST00000542355 NOB1Q9ULX3 412 aaKnown RBP14.14□□□□□ -0.15
SCG3-202ENST00000542355 COG6Q9Y2V7 657 aa14.14□□□□□ -0.15
SCG3-202ENST00000542355 AKAP4Q5JQC9 854 aa14.13□□□□□ -0.15
SCG3-202ENST00000542355 ZKSCAN2Q63HK3 967 aa14.13□□□□□ -0.15
SCG3-202ENST00000542355 LGR6Q9HBX8 967 aa14.13□□□□□ -0.15
SCG3-202ENST00000542355 TCERG1O14776 1098 aaKnown RBP14.13□□□□□ -0.15
SCG3-202ENST00000542355 RGPD2P0DJD1 1756 aa14.12□□□□□ -0.15
SCG3-202ENST00000542355 RLBP1P12271 317 aa14.12□□□□□ -0.15
SCG3-202ENST00000542355 PIP4K2BP78356 416 aa14.12□□□□□ -0.15
SCG3-202ENST00000542355 C1orf141Q5JVX7 400 aa14.12□□□□□ -0.15
SCG3-202ENST00000542355 NHSL1Q5SYE7 1610 aa14.12□□□□□ -0.15
SCG3-202ENST00000542355 TOM1O60784 492 aa14.12□□□□□ -0.15
SCG3-202ENST00000542355 VASPP50552 380 aaPredicted RBP14.12□□□□□ -0.15
SCG3-202ENST00000542355 TAF7Q15545 349 aaPredicted RBP14.12□□□□□ -0.15
SCG3-202ENST00000542355 MPRIPQ6WCQ1 1025 aa14.12□□□□□ -0.15
SCG3-202ENST00000542355 COL18A1P39060 1754 aa14.11□□□□□ -0.15
SCG3-202ENST00000542355 TATP17735 454 aaPredicted RBP14.11□□□□□ -0.15
SCG3-202ENST00000542355 CRYBG1Q9Y4K1 1723 aa14.11□□□□□ -0.15
SCG3-202ENST00000542355 RGPD5Q99666 1765 aa14.11□□□□□ -0.15
SCG3-202ENST00000542355 ROBO1Q9Y6N7 1651 aa14.1□□□□□ -0.15
SCG3-202ENST00000542355 TRIM27P14373 513 aa14.1□□□□□ -0.15
SCG3-202ENST00000542355 TOM1L2Q6ZVM7 507 aa14.1□□□□□ -0.15
SCG3-202ENST00000542355 FTSJ3Q8IY81 847 aaKnown RBP14.1□□□□□ -0.15
SCG3-202ENST00000542355 DZIP1LQ8IYY4 767 aaKnown RBP14.1□□□□□ -0.15
SCG3-202ENST00000542355 IPO8O15397 1037 aaKnown RBP14.1□□□□□ -0.15
SCG3-202ENST00000542355 EVA1CP58658 441 aa14.1□□□□□ -0.15
SCG3-202ENST00000542355 ATF7IPQ6VMQ6 1270 aa14.1□□□□□ -0.15
SCG3-202ENST00000542355 MRPL50Q8N5N7 158 aaKnown RBP14.1□□□□□ -0.15
SCG3-202ENST00000542355 STRN4Q9NRL3 753 aa14.1□□□□□ -0.15
SCG3-202ENST00000542355 KIF16BQ96L93 1317 aa14.1□□□□□ -0.15
SCG3-202ENST00000542355 MYCNP04198 464 aaPredicted RBP14.09□□□□□ -0.15
SCG3-202ENST00000542355 WDR17Q8IZU2 1322 aa14.09□□□□□ -0.15
SCG3-202ENST00000542355 ABCC6O95255 1503 aa14.09□□□□□ -0.15
SCG3-202ENST00000542355 CEMIPQ8WUJ3 1361 aa14.09□□□□□ -0.15
SCG3-202ENST00000542355 CAMTA1Q9Y6Y1 1673 aa14.09□□□□□ -0.15
SCG3-202ENST00000542355 MS4A1P11836 297 aa14.09□□□□□ -0.15
SCG3-202ENST00000542355 BRPF1P55201 1214 aaPredicted RBP14.09□□□□□ -0.15
SCG3-202ENST00000542355 SPRYD3Q8NCJ5 442 aa14.09□□□□□ -0.15
SCG3-202ENST00000542355 SPG7Q9UQ90 795 aa14.08□□□□□ -0.16
SCG3-202ENST00000542355 RNMTO43148 476 aaKnown RBP14.07□□□□□ -0.16
SCG3-202ENST00000542355 TEFQ10587 303 aa14.07□□□□□ -0.16
SCG3-202ENST00000542355 BABAM1Q9NWV8 329 aa14.07□□□□□ -0.16
SCG3-202ENST00000542355 UBAP1LF5GYI3 381 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms