RNA–Protein interactions for RNA: ENST00000541967.1

ARF3-209, Transcript of ADP ribosylation factor 3, humanhuman

TSL 4

Gene ARF3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-209ENST00000541967 RAPGEF4Q8WZA2 1011 aa23.52■■□□□ 1.36
ARF3-209ENST00000541967 EP400Q96L91 3159 aa23.52■■□□□ 1.36
ARF3-209ENST00000541967 VIRMAQ69YN4 1812 aaKnown RBP23.52■■□□□ 1.36
ARF3-209ENST00000541967 PLEKHG2Q9H7P9 1386 aa23.52■■□□□ 1.36
ARF3-209ENST00000541967 EXOC5O00471 708 aa23.51■■□□□ 1.35
ARF3-209ENST00000541967 TATP17735 454 aaPredicted RBP23.51■■□□□ 1.35
ARF3-209ENST00000541967 U2SURPO15042 1029 aaKnown RBP23.5■■□□□ 1.35
ARF3-209ENST00000541967 NUDCQ9Y266 331 aa23.5■■□□□ 1.35
ARF3-209ENST00000541967 HMOX1P09601 288 aa23.48■■□□□ 1.35
ARF3-209ENST00000541967 PDE3BQ13370 1112 aa23.48■■□□□ 1.35
ARF3-209ENST00000541967 ZCRB1Q8TBF4 217 aaKnown RBP23.47■■□□□ 1.35
ARF3-209ENST00000541967 MARCH10Q8NA82 808 aaPredicted RBP23.46■■□□□ 1.35
ARF3-209ENST00000541967 KAT6BQ8WYB5 2073 aa23.46■■□□□ 1.35
ARF3-209ENST00000541967 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.45■■□□□ 1.34
ARF3-209ENST00000541967 CCDC184Q52MB2 194 aa23.44■■□□□ 1.34
ARF3-209ENST00000541967 FAM182BQ5T319 152 aa23.44■■□□□ 1.34
ARF3-209ENST00000541967 DIEXFQ68CQ4 756 aaKnown RBP23.44■■□□□ 1.34
ARF3-209ENST00000541967 DOT1LQ8TEK3 1739 aa23.44■■□□□ 1.34
ARF3-209ENST00000541967 BCL9O00512 1426 aa23.43■■□□□ 1.34
ARF3-209ENST00000541967 U2AF1L5P0DN76 240 aaPredicted RBP23.43■■□□□ 1.34
ARF3-209ENST00000541967 U2AF1Q01081 240 aaKnown RBP eCLIP23.43■■□□□ 1.34
ARF3-209ENST00000541967 RSPH6AQ9H0K4 717 aa23.43■■□□□ 1.34
ARF3-209ENST00000541967 DLG5Q8TDM6 1919 aa23.43■■□□□ 1.34
ARF3-209ENST00000541967 TNS1Q9HBL0 1735 aaKnown RBP23.42■■□□□ 1.34
ARF3-209ENST00000541967 TOGARAM1Q9Y4F4 1720 aa23.42■■□□□ 1.34
ARF3-209ENST00000541967 ITGB4P16144 1822 aa23.42■■□□□ 1.34
ARF3-209ENST00000541967 NHSQ6T4R5 1651 aa23.41■■□□□ 1.34
ARF3-209ENST00000541967 PCDH11XQ9BZA7 1347 aa23.41■■□□□ 1.34
ARF3-209ENST00000541967 PCDH11YQ9BZA8 1340 aa23.41■■□□□ 1.34
ARF3-209ENST00000541967 SPG7Q9UQ90 795 aa23.41■■□□□ 1.34
ARF3-209ENST00000541967 SCN11AQ9UI33 1791 aa23.4■■□□□ 1.34
ARF3-209ENST00000541967 FCHSD2O94868 740 aa23.4■■□□□ 1.34
ARF3-209ENST00000541967 DDX54Q8TDD1 881 aaKnown RBP23.4■■□□□ 1.34
ARF3-209ENST00000541967 CYP27B1O15528 508 aa23.39■■□□□ 1.33
ARF3-209ENST00000541967 AMOTQ4VCS5 1084 aa23.39■■□□□ 1.33
ARF3-209ENST00000541967 PLEKHO1Q53GL0 409 aaPredicted RBP23.39■■□□□ 1.33
ARF3-209ENST00000541967 FAM196AQ6ZSG2 479 aa23.39■■□□□ 1.33
ARF3-209ENST00000541967 PRKAR2BP31323 418 aa23.38■■□□□ 1.33
ARF3-209ENST00000541967 ADAMTS7Q9UKP4 1686 aa23.36■■□□□ 1.33
ARF3-209ENST00000541967 PHKG2P15735 406 aa23.35■■□□□ 1.33
ARF3-209ENST00000541967 IFNL2Q8IZJ0 200 aa23.35■■□□□ 1.33
ARF3-209ENST00000541967 MRS2Q9HD23 443 aa23.35■■□□□ 1.33
ARF3-209ENST00000541967 BTAF1O14981 1849 aa23.35■■□□□ 1.33
ARF3-209ENST00000541967 WDR43Q15061 677 aaKnown RBP eCLIP23.34■■□□□ 1.33
ARF3-209ENST00000541967 NKX1-1Q15270 411 aaPredicted RBP23.34■■□□□ 1.33
ARF3-209ENST00000541967 MTHFSDQ2M296 383 aaKnown RBP23.34■■□□□ 1.33
ARF3-209ENST00000541967 PHACTR3Q96KR7 559 aa23.34■■□□□ 1.33
ARF3-209ENST00000541967 PLEKHF1Q96S99 279 aa23.34■■□□□ 1.33
ARF3-209ENST00000541967 ZNF530Q6P9A1 599 aaPredicted RBP23.33■■□□□ 1.33
ARF3-209ENST00000541967 ADAMTS8Q9UP79 889 aa23.32■■□□□ 1.32
ARF3-209ENST00000541967 PNISRQ8TF01 805 aaKnown RBP23.31■■□□□ 1.32
ARF3-209ENST00000541967 PNNQ9H307 717 aaKnown RBP23.3■■□□□ 1.32
ARF3-209ENST00000541967 KDM6AO15550 1401 aaPredicted RBP23.29■■□□□ 1.32
ARF3-209ENST00000541967 AKAP4Q5JQC9 854 aa23.29■■□□□ 1.32
ARF3-209ENST00000541967 GAS2L2Q8NHY3 880 aa23.29■■□□□ 1.32
ARF3-209ENST00000541967 RGPD3A6NKT7 1758 aaPredicted RBP23.29■■□□□ 1.32
ARF3-209ENST00000541967 SIPA1L3O60292 1781 aaPredicted RBP23.29■■□□□ 1.32
ARF3-209ENST00000541967 RGPD4Q7Z3J3 1758 aa23.29■■□□□ 1.32
ARF3-209ENST00000541967 CCER2I3L3R5 266 aa23.28■■□□□ 1.32
ARF3-209ENST00000541967 TRIM37O94972 964 aa23.28■■□□□ 1.32
ARF3-209ENST00000541967 C1orf141Q5JVX7 400 aa23.28■■□□□ 1.32
ARF3-209ENST00000541967 HSP90AB1P08238 724 aaKnown RBP23.27■■□□□ 1.32
ARF3-209ENST00000541967 MIER1Q8N108 512 aa23.27■■□□□ 1.32
ARF3-209ENST00000541967 ACSBG1Q96GR2 724 aa23.27■■□□□ 1.32
ARF3-209ENST00000541967 KCNQ2O43526 872 aa23.26■■□□□ 1.31
ARF3-209ENST00000541967 PTF1AQ7RTS3 328 aa23.26■■□□□ 1.31
ARF3-209ENST00000541967 CCDC125Q86Z20 511 aa23.26■■□□□ 1.31
ARF3-209ENST00000541967 BCL11BQ9C0K0 894 aaPredicted RBP23.26■■□□□ 1.31
ARF3-209ENST00000541967 DCAF5Q96JK2 942 aa23.25■■□□□ 1.31
ARF3-209ENST00000541967 MAP3K5Q99683 1374 aa23.25■■□□□ 1.31
ARF3-209ENST00000541967 LY75O60449 1722 aa23.25■■□□□ 1.31
ARF3-209ENST00000541967 NEFMP07197 916 aa23.24■■□□□ 1.31
ARF3-209ENST00000541967 CCDC146Q8IYE0 955 aa23.24■■□□□ 1.31
ARF3-209ENST00000541967 RUNDC1Q96C34 613 aa23.24■■□□□ 1.31
ARF3-209ENST00000541967 MAPK8IP3Q9UPT6 1336 aa23.24■■□□□ 1.31
ARF3-209ENST00000541967 MRC1P22897 1456 aa23.24■■□□□ 1.31
ARF3-209ENST00000541967 PRIM1P49642 420 aaKnown RBP23.23■■□□□ 1.31
ARF3-209ENST00000541967 MPRIPQ6WCQ1 1025 aa23.23■■□□□ 1.31
ARF3-209ENST00000541967 GNAT3A8MTJ3 354 aa23.22■■□□□ 1.31
ARF3-209ENST00000541967 RREB1Q92766 1687 aa23.22■■□□□ 1.31
ARF3-209ENST00000541967 NFE2L2Q16236 605 aa23.21■■□□□ 1.31
ARF3-209ENST00000541967 PAPPAQ13219 1627 aa23.2■■□□□ 1.3
ARF3-209ENST00000541967 ERVV-2B6SEH9 535 aa23.2■■□□□ 1.3
ARF3-209ENST00000541967 RNMTO43148 476 aaKnown RBP23.2■■□□□ 1.3
ARF3-209ENST00000541967 LGR6Q9HBX8 967 aa23.2■■□□□ 1.3
ARF3-209ENST00000541967 SYTL4Q96C24 671 aaPredicted RBP23.19■■□□□ 1.3
ARF3-209ENST00000541967 CEMIPQ8WUJ3 1361 aa23.18■■□□□ 1.3
ARF3-209ENST00000541967 SF3B2Q13435 895 aaKnown RBP23.18■■□□□ 1.3
ARF3-209ENST00000541967 IL17REQ8NFR9 667 aa23.18■■□□□ 1.3
ARF3-209ENST00000541967 HTATSF1O43719 755 aaKnown RBP23.17■■□□□ 1.3
ARF3-209ENST00000541967 APBA3O96018 575 aa23.17■■□□□ 1.3
ARF3-209ENST00000541967 TMPOP42166 694 aaKnown RBP23.17■■□□□ 1.3
ARF3-209ENST00000541967 FAM9BQ8IZU0 186 aa23.16■■□□□ 1.3
ARF3-209ENST00000541967 PIGBQ92521 554 aa23.16■■□□□ 1.3
ARF3-209ENST00000541967 NUP188Q5SRE5 1749 aa23.16■■□□□ 1.3
ARF3-209ENST00000541967 UBR2Q8IWV8 1755 aa23.15■■□□□ 1.3
ARF3-209ENST00000541967 BAG6P46379 1132 aa23.15■■□□□ 1.3
ARF3-209ENST00000541967 DEFB132Q7Z7B7 95 aa23.15■■□□□ 1.3
ARF3-209ENST00000541967 TMOD3Q9NYL9 352 aa23.15■■□□□ 1.3
ARF3-209ENST00000541967 PLSCR1O15162 318 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms