RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 CRACR2BQ8N4Y2 399 aaPredicted RBP12.58□□□□□ -0.4
GABRB3-204ENST00000541819 NOB1Q9ULX3 412 aaKnown RBP12.58□□□□□ -0.4
GABRB3-204ENST00000541819 TMEM132EQ6IEE7 984 aa12.58□□□□□ -0.4
GABRB3-204ENST00000541819 TCP11L2Q8N4U5 519 aa12.58□□□□□ -0.4
GABRB3-204ENST00000541819 DYDC1Q8WWB3 177 aa12.58□□□□□ -0.4
GABRB3-204ENST00000541819 CEP126Q9P2H0 1117 aa12.58□□□□□ -0.4
GABRB3-204ENST00000541819 CADPSQ9ULU8 1353 aa12.58□□□□□ -0.4
GABRB3-204ENST00000541819 BICDL1Q6ZP65 573 aa12.58□□□□□ -0.4
GABRB3-204ENST00000541819 PIBF1Q8WXW3 757 aa12.58□□□□□ -0.4
GABRB3-204ENST00000541819 CCDC102AQ96A19 550 aa12.58□□□□□ -0.4
GABRB3-204ENST00000541819 UPF3BQ9BZI7 483 aaKnown RBP12.57□□□□□ -0.4
GABRB3-204ENST00000541819 AIDAQ96BJ3 306 aa12.57□□□□□ -0.4
GABRB3-204ENST00000541819 NF2P35240 595 aa12.57□□□□□ -0.4
GABRB3-204ENST00000541819 IMMTQ16891 758 aaKnown RBP12.57□□□□□ -0.4
GABRB3-204ENST00000541819 GOLGA6L10A0A0M3HER8 536 aa12.57□□□□□ -0.4
GABRB3-204ENST00000541819 SPA17Q15506 151 aa12.57□□□□□ -0.4
GABRB3-204ENST00000541819 TAF3Q5VWG9 929 aa12.57□□□□□ -0.4
GABRB3-204ENST00000541819 EHMT1Q9H9B1 1298 aa12.57□□□□□ -0.4
GABRB3-204ENST00000541819 ARHGAP29Q52LW3 1261 aa12.56□□□□□ -0.4
GABRB3-204ENST00000541819 PPP6R1Q9UPN7 881 aa12.56□□□□□ -0.4
GABRB3-204ENST00000541819 FKBP15Q5T1M5 1219 aa12.56□□□□□ -0.4
GABRB3-204ENST00000541819 PPM1EQ8WY54 764 aa12.56□□□□□ -0.4
GABRB3-204ENST00000541819 CUL5Q93034 780 aa12.56□□□□□ -0.4
GABRB3-204ENST00000541819 POLR3DP05423 398 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-204ENST00000541819 PAXIP1Q6ZW49 1069 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-204ENST00000541819 VPS36Q86VN1 386 aa12.56□□□□□ -0.4
GABRB3-204ENST00000541819 DRC1Q96MC2 740 aa12.56□□□□□ -0.4
GABRB3-204ENST00000541819 COMMD10Q9Y6G5 202 aa12.56□□□□□ -0.4
GABRB3-204ENST00000541819 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-204ENST00000541819 NUP62CLQ9H1M0 184 aa12.55□□□□□ -0.4
GABRB3-204ENST00000541819 ZNF652Q9Y2D9 606 aa12.55□□□□□ -0.4
GABRB3-204ENST00000541819 PABPN1LA6NDY0 278 aaKnown RBP12.55□□□□□ -0.4
GABRB3-204ENST00000541819 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.55□□□□□ -0.4
GABRB3-204ENST00000541819 SPINK5Q9NQ38 1064 aaPredicted RBP12.55□□□□□ -0.4
GABRB3-204ENST00000541819 TTLL12Q14166 644 aaPredicted RBP12.55□□□□□ -0.4
GABRB3-204ENST00000541819 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
GABRB3-204ENST00000541819 CCDC113Q9H0I3 377 aa12.55□□□□□ -0.4
GABRB3-204ENST00000541819 GBP3Q9H0R5 595 aa12.55□□□□□ -0.4
GABRB3-204ENST00000541819 CCDC7Q96M83 1385 aa12.55□□□□□ -0.4
GABRB3-204ENST00000541819 K7ELQ4 463 aaPredicted RBP12.55□□□□□ -0.4
GABRB3-204ENST00000541819 CEP63Q96MT8 703 aa12.55□□□□□ -0.4
GABRB3-204ENST00000541819 JAKMIP1Q96N16 626 aaKnown RBP12.55□□□□□ -0.4
GABRB3-204ENST00000541819 IDH1O75874 414 aaKnown RBP12.54□□□□□ -0.4
GABRB3-204ENST00000541819 FERMT2Q96AC1 680 aa12.54□□□□□ -0.4
GABRB3-204ENST00000541819 BTBD11A6QL63 1104 aa12.54□□□□□ -0.4
GABRB3-204ENST00000541819 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
GABRB3-204ENST00000541819 HOOK3Q86VS8 718 aa12.54□□□□□ -0.4
GABRB3-204ENST00000541819 FEZ1Q99689 392 aa12.54□□□□□ -0.4
GABRB3-204ENST00000541819 PDIA4P13667 645 aaKnown RBP12.54□□□□□ -0.4
GABRB3-204ENST00000541819 CAVIN4Q5BKX8 364 aa12.54□□□□□ -0.4
GABRB3-204ENST00000541819 THEMISQ8N1K5 641 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-204ENST00000541819 HOMER2Q9NSB8 354 aa12.54□□□□□ -0.4
GABRB3-204ENST00000541819 ADAMTS8Q9UP79 889 aa12.54□□□□□ -0.4
GABRB3-204ENST00000541819 GCOM1H8Y6P7 765 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-204ENST00000541819 MYZAPP0CAP1 466 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 CUX1P39880 1505 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 GSTTP1A0A1W2PQM5 241 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 FGFR1OPO95684 399 aaKnown RBP12.53□□□□□ -0.4
GABRB3-204ENST00000541819 PIP4K2BP78356 416 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 LARP1Q6PKG0 1096 aaKnown RBP12.53□□□□□ -0.4
GABRB3-204ENST00000541819 STARD3NLO95772 234 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 PRAM1Q96QH2 718 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 UBA5Q9GZZ9 404 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 PRDM11Q9NQV5 511 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 ZNF428Q96B54 188 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 CRACR2AQ9BSW2 395 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 MKNK2Q9HBH9 465 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 SHTN1A0MZ66 631 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 ANKRD18BA2A2Z9 1011 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-204ENST00000541819 CCDC178Q5BJE1 867 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 CACNA2D4Q7Z3S7 1137 aa12.53□□□□□ -0.4
GABRB3-204ENST00000541819 PHAXQ9H814 394 aaKnown RBP12.53□□□□□ -0.4
GABRB3-204ENST00000541819 TMEM266Q2M3C6 531 aa12.52□□□□□ -0.4
GABRB3-204ENST00000541819 CTNNBL1Q8WYA6 563 aaPredicted RBP12.52□□□□□ -0.4
GABRB3-204ENST00000541819 RAB34Q9BZG1 259 aa12.52□□□□□ -0.4
GABRB3-204ENST00000541819 AKAP2Q9Y2D5 859 aa12.52□□□□□ -0.4
GABRB3-204ENST00000541819 RBM10P98175 930 aaKnown RBP12.52□□□□□ -0.41
GABRB3-204ENST00000541819 CFAP100Q494V2 611 aa12.52□□□□□ -0.41
GABRB3-204ENST00000541819 WDR78Q5VTH9 848 aa12.52□□□□□ -0.41
GABRB3-204ENST00000541819 SRGAP3O43295 1099 aa12.52□□□□□ -0.41
GABRB3-204ENST00000541819 ZPR1O75312 459 aa12.52□□□□□ -0.41
GABRB3-204ENST00000541819 METTL24Q5JXM2 366 aa12.52□□□□□ -0.41
GABRB3-204ENST00000541819 CWC27Q6UX04 472 aaKnown RBP12.52□□□□□ -0.41
GABRB3-204ENST00000541819 GIMAP7Q8NHV1 300 aa12.52□□□□□ -0.41
GABRB3-204ENST00000541819 ABCF2Q9UG63 623 aa12.52□□□□□ -0.41
GABRB3-204ENST00000541819 KIF20AO95235 890 aa12.52□□□□□ -0.41
GABRB3-204ENST00000541819 GOPCQ9HD26 462 aa12.52□□□□□ -0.41
GABRB3-204ENST00000541819 SMC1AQ14683 1233 aaKnown RBP12.51□□□□□ -0.41
GABRB3-204ENST00000541819 CCDC96Q2M329 555 aa12.51□□□□□ -0.41
GABRB3-204ENST00000541819 ARHGAP5Q13017 1502 aa12.51□□□□□ -0.41
GABRB3-204ENST00000541819 MCM3P25205 808 aa12.51□□□□□ -0.41
GABRB3-204ENST00000541819 CTNNA2P26232 953 aa12.51□□□□□ -0.41
GABRB3-204ENST00000541819 IFFO1Q0D2I5 559 aa12.51□□□□□ -0.41
GABRB3-204ENST00000541819 PRDM2Q13029 1718 aa12.51□□□□□ -0.41
GABRB3-204ENST00000541819 MAP9Q49MG5 647 aa12.51□□□□□ -0.41
GABRB3-204ENST00000541819 PPP2R1AP30153 589 aa12.51□□□□□ -0.41
GABRB3-204ENST00000541819 GIGYF2Q6Y7W6 1299 aaKnown RBP12.51□□□□□ -0.41
GABRB3-204ENST00000541819 PDE3AQ14432 1141 aa12.5□□□□□ -0.41
GABRB3-204ENST00000541819 LUZP1Q86V48 1076 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms