RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 EXOSC9Q06265 439 aaKnown RBP22.89■■□□□ 1.25
RAB6A-208ENST00000541795 CFAP44Q96MT7 982 aa22.89■■□□□ 1.25
RAB6A-208ENST00000541795 GNAT3A8MTJ3 354 aa22.88■■□□□ 1.25
RAB6A-208ENST00000541795 UBAP1LF5GYI3 381 aa22.88■■□□□ 1.25
RAB6A-208ENST00000541795 HTATSF1O43719 755 aaKnown RBP22.88■■□□□ 1.25
RAB6A-208ENST00000541795 LRRC37A3O60309 1634 aa22.88■■□□□ 1.25
RAB6A-208ENST00000541795 PLIN1O60240 522 aa22.87■■□□□ 1.25
RAB6A-208ENST00000541795 COL5A2P05997 1499 aaPredicted RBP22.86■■□□□ 1.25
RAB6A-208ENST00000541795 CRB1P82279 1406 aa22.86■■□□□ 1.25
RAB6A-208ENST00000541795 PLEKHO1Q53GL0 409 aaPredicted RBP22.86■■□□□ 1.25
RAB6A-208ENST00000541795 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.86■■□□□ 1.25
RAB6A-208ENST00000541795 MBIPQ9NS73 344 aa22.86■■□□□ 1.25
RAB6A-208ENST00000541795 BCAR3O75815 825 aa22.85■■□□□ 1.25
RAB6A-208ENST00000541795 AMOTQ4VCS5 1084 aa22.85■■□□□ 1.25
RAB6A-208ENST00000541795 RARSP54136 660 aaKnown RBP22.85■■□□□ 1.25
RAB6A-208ENST00000541795 WDR17Q8IZU2 1322 aa22.84■■□□□ 1.25
RAB6A-208ENST00000541795 RAPGEF4Q8WZA2 1011 aa22.83■■□□□ 1.25
RAB6A-208ENST00000541795 COL14A1Q05707 1796 aaKnown RBP22.83■■□□□ 1.25
RAB6A-208ENST00000541795 ZNF530Q6P9A1 599 aaPredicted RBP22.82■■□□□ 1.24
RAB6A-208ENST00000541795 MEGF6O75095 1541 aa22.81■■□□□ 1.24
RAB6A-208ENST00000541795 CHL1O00533 1208 aa22.8■■□□□ 1.24
RAB6A-208ENST00000541795 AKAP4Q5JQC9 854 aa22.8■■□□□ 1.24
RAB6A-208ENST00000541795 VIRMAQ69YN4 1812 aaKnown RBP22.8■■□□□ 1.24
RAB6A-208ENST00000541795 PLEKHG2Q9H7P9 1386 aa22.8■■□□□ 1.24
RAB6A-208ENST00000541795 TATP17735 454 aaPredicted RBP22.8■■□□□ 1.24
RAB6A-208ENST00000541795 CERKQ8TCT0 537 aa22.8■■□□□ 1.24
RAB6A-208ENST00000541795 TOM1L2Q6ZVM7 507 aa22.79■■□□□ 1.24
RAB6A-208ENST00000541795 IL17REQ8NFR9 667 aa22.79■■□□□ 1.24
RAB6A-208ENST00000541795 PPP4R2Q9NY27 417 aa22.79■■□□□ 1.24
RAB6A-208ENST00000541795 C1orf141Q5JVX7 400 aa22.78■■□□□ 1.24
RAB6A-208ENST00000541795 PKD1L3Q7Z443 1732 aa22.78■■□□□ 1.24
RAB6A-208ENST00000541795 PARP4Q9UKK3 1724 aaKnown RBP22.78■■□□□ 1.24
RAB6A-208ENST00000541795 BCL2L13Q9BXK5 485 aa22.78■■□□□ 1.24
RAB6A-208ENST00000541795 CEMIPQ8WUJ3 1361 aa22.77■■□□□ 1.24
RAB6A-208ENST00000541795 EVA1CP58658 441 aa22.77■■□□□ 1.24
RAB6A-208ENST00000541795 STRN4Q9NRL3 753 aa22.77■■□□□ 1.24
RAB6A-208ENST00000541795 C20orf194Q5TEA3 1177 aa22.76■■□□□ 1.23
RAB6A-208ENST00000541795 CANXP27824 592 aaKnown RBP22.75■■□□□ 1.23
RAB6A-208ENST00000541795 ZNF428Q96B54 188 aa22.75■■□□□ 1.23
RAB6A-208ENST00000541795 TSPYL4Q9UJ04 414 aa22.75■■□□□ 1.23
RAB6A-208ENST00000541795 TSPYL6Q8N831 410 aa22.75■■□□□ 1.23
RAB6A-208ENST00000541795 EXOC6Q8TAG9 804 aa22.75■■□□□ 1.23
RAB6A-208ENST00000541795 CARD10Q9BWT7 1032 aa22.75■■□□□ 1.23
RAB6A-208ENST00000541795 SMC4Q9NTJ3 1288 aa22.75■■□□□ 1.23
RAB6A-208ENST00000541795 BTG4Q9NY30 223 aa22.75■■□□□ 1.23
RAB6A-208ENST00000541795 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.75■■□□□ 1.23
RAB6A-208ENST00000541795 SPG7Q9UQ90 795 aa22.75■■□□□ 1.23
RAB6A-208ENST00000541795 TWISTNBQ3B726 338 aaPredicted RBP22.74■■□□□ 1.23
RAB6A-208ENST00000541795 LARP1Q6PKG0 1096 aaKnown RBP22.74■■□□□ 1.23
RAB6A-208ENST00000541795 C8orf58Q8NAV2 365 aa22.74■■□□□ 1.23
RAB6A-208ENST00000541795 SSH1Q8WYL5 1049 aa22.74■■□□□ 1.23
RAB6A-208ENST00000541795 OVOS2A0A0G2JMS6 1433 aa22.73■■□□□ 1.23
RAB6A-208ENST00000541795 PLCH1Q4KWH8 1693 aa22.73■■□□□ 1.23
RAB6A-208ENST00000541795 VAMP4O75379 141 aa22.73■■□□□ 1.23
RAB6A-208ENST00000541795 FRAT1Q92837 279 aaPredicted RBP22.73■■□□□ 1.23
RAB6A-208ENST00000541795 CRBNQ96SW2 442 aa22.73■■□□□ 1.23
RAB6A-208ENST00000541795 MIS18AQ9NYP9 233 aa22.73■■□□□ 1.23
RAB6A-208ENST00000541795 ADAMTS7Q9UKP4 1686 aa22.73■■□□□ 1.23
RAB6A-208ENST00000541795 ALDH1L2Q3SY69 923 aa22.73■■□□□ 1.23
RAB6A-208ENST00000541795 LGR6Q9HBX8 967 aa22.73■■□□□ 1.23
RAB6A-208ENST00000541795 ELL2O00472 640 aaPredicted RBP22.72■■□□□ 1.23
RAB6A-208ENST00000541795 TAF7Q15545 349 aaPredicted RBP22.72■■□□□ 1.23
RAB6A-208ENST00000541795 MPRIPQ6WCQ1 1025 aa22.72■■□□□ 1.23
RAB6A-208ENST00000541795 BABAM1Q9NWV8 329 aa22.71■■□□□ 1.23
RAB6A-208ENST00000541795 RNMTO43148 476 aaKnown RBP22.71■■□□□ 1.23
RAB6A-208ENST00000541795 PDE3AQ14432 1141 aa22.7■■□□□ 1.22
RAB6A-208ENST00000541795 SCN11AQ9UI33 1791 aa22.7■■□□□ 1.22
RAB6A-208ENST00000541795 ADAMTS2O95450 1211 aa22.69■■□□□ 1.22
RAB6A-208ENST00000541795 KDM3BQ7LBC6 1761 aa22.69■■□□□ 1.22
RAB6A-208ENST00000541795 TEFQ10587 303 aa22.68■■□□□ 1.22
RAB6A-208ENST00000541795 KRT24Q2M2I5 525 aa22.68■■□□□ 1.22
RAB6A-208ENST00000541795 SIPA1L3O60292 1781 aaPredicted RBP22.68■■□□□ 1.22
RAB6A-208ENST00000541795 NUTM2BA6NNL0 878 aaPredicted RBP22.68■■□□□ 1.22
RAB6A-208ENST00000541795 NUTM2EB1AL46 878 aaPredicted RBP22.68■■□□□ 1.22
RAB6A-208ENST00000541795 PHKG2P15735 406 aa22.68■■□□□ 1.22
RAB6A-208ENST00000541795 NUTM2AQ8IVF1 878 aaPredicted RBP22.68■■□□□ 1.22
RAB6A-208ENST00000541795 KIF16BQ96L93 1317 aa22.68■■□□□ 1.22
RAB6A-208ENST00000541795 IL2RBP14784 551 aa22.67■■□□□ 1.22
RAB6A-208ENST00000541795 IFNL2Q8IZJ0 200 aa22.67■■□□□ 1.22
RAB6A-208ENST00000541795 NRAPQ86VF7 1730 aa22.67■■□□□ 1.22
RAB6A-208ENST00000541795 JCADQ9P266 1359 aa22.67■■□□□ 1.22
RAB6A-208ENST00000541795 ZKSCAN2Q63HK3 967 aa22.66■■□□□ 1.22
RAB6A-208ENST00000541795 B4GALNT3Q6L9W6 998 aa22.66■■□□□ 1.22
RAB6A-208ENST00000541795 BRPF1P55201 1214 aaPredicted RBP22.66■■□□□ 1.22
RAB6A-208ENST00000541795 KDM6AO15550 1401 aaPredicted RBP22.65■■□□□ 1.22
RAB6A-208ENST00000541795 SHANK3Q9BYB0 1731 aa22.64■■□□□ 1.22
RAB6A-208ENST00000541795 CYP27B1O15528 508 aa22.64■■□□□ 1.22
RAB6A-208ENST00000541795 PANK1Q8TE04 598 aa22.64■■□□□ 1.22
RAB6A-208ENST00000541795 NWD2Q9ULI1 1742 aa22.64■■□□□ 1.21
RAB6A-208ENST00000541795 MRPL50Q8N5N7 158 aaKnown RBP22.64■■□□□ 1.21
RAB6A-208ENST00000541795 ZCRB1Q8TBF4 217 aaKnown RBP22.64■■□□□ 1.21
RAB6A-208ENST00000541795 USP35Q9P2H5 1018 aa22.64■■□□□ 1.21
RAB6A-208ENST00000541795 NOB1Q9ULX3 412 aaKnown RBP22.64■■□□□ 1.21
RAB6A-208ENST00000541795 PCDH11XQ9BZA7 1347 aa22.64■■□□□ 1.21
RAB6A-208ENST00000541795 PCDH11YQ9BZA8 1340 aa22.64■■□□□ 1.21
RAB6A-208ENST00000541795 CCDC136Q96JN2 1154 aa22.63■■□□□ 1.21
RAB6A-208ENST00000541795 TNNQ9UQP3 1299 aa22.63■■□□□ 1.21
RAB6A-208ENST00000541795 HSP90AB1P08238 724 aaKnown RBP22.62■■□□□ 1.21
RAB6A-208ENST00000541795 WNK3Q9BYP7 1800 aa22.62■■□□□ 1.21
RAB6A-208ENST00000541795 BTBD11A6QL63 1104 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms