RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.11□□□□□ -1.11
SNHG1-217ENST00000541578 POLMQ9NP87 494 aaPredicted RBP8.11□□□□□ -1.11
SNHG1-217ENST00000541578 MYCP01106 439 aaPredicted RBP8.1□□□□□ -1.11
SNHG1-217ENST00000541578 NFX1Q12986 1120 aaKnown RBP8.1□□□□□ -1.11
SNHG1-217ENST00000541578 TSGA10IPQ3SY00 556 aa8.1□□□□□ -1.11
SNHG1-217ENST00000541578 CYP2U1Q7Z449 544 aa8.1□□□□□ -1.11
SNHG1-217ENST00000541578 NPAS3Q8IXF0 933 aa8.1□□□□□ -1.11
SNHG1-217ENST00000541578 SLC16A10Q8TF71 515 aa8.1□□□□□ -1.11
SNHG1-217ENST00000541578 CDCA7Q9BWT1 371 aaPredicted RBP8.1□□□□□ -1.11
SNHG1-217ENST00000541578 DOLKQ9UPQ8 538 aa8.1□□□□□ -1.11
SNHG1-217ENST00000541578 OSBPL3Q9H4L5 887 aa8.09□□□□□ -1.11
SNHG1-217ENST00000541578 ALG2Q9H553 416 aa8.09□□□□□ -1.11
SNHG1-217ENST00000541578 A0A1W2PRU2 124 aa8.08□□□□□ -1.12
SNHG1-217ENST00000541578 MEN1O00255 615 aa8.08□□□□□ -1.12
SNHG1-217ENST00000541578 TRAK2O60296 914 aa8.08□□□□□ -1.12
SNHG1-217ENST00000541578 USP4Q13107 963 aa8.08□□□□□ -1.12
SNHG1-217ENST00000541578 CHIC2Q9UKJ5 165 aa8.08□□□□□ -1.12
SNHG1-217ENST00000541578 MAP7D1Q3KQU3 841 aa8.07□□□□□ -1.12
SNHG1-217ENST00000541578 CLUAP1Q96AJ1 413 aa8.07□□□□□ -1.12
SNHG1-217ENST00000541578 NLRP3Q96P20 1036 aa8.07□□□□□ -1.12
SNHG1-217ENST00000541578 H3BM21 787 aa8.06□□□□□ -1.12
SNHG1-217ENST00000541578 VEGFBP49765 207 aa8.06□□□□□ -1.12
SNHG1-217ENST00000541578 RNF144AP50876 292 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-217ENST00000541578 OXLD1Q5BKU9 147 aa8.06□□□□□ -1.12
SNHG1-217ENST00000541578 LCE2AQ5TA79 106 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-217ENST00000541578 RNF217Q8TC41 542 aa8.06□□□□□ -1.12
SNHG1-217ENST00000541578 SIRT1Q96EB6 747 aa8.06□□□□□ -1.12
SNHG1-217ENST00000541578 POM121CA8CG34 1229 aa8.05□□□□□ -1.12
SNHG1-217ENST00000541578 GNRH1P01148 92 aa8.05□□□□□ -1.12
SNHG1-217ENST00000541578 PTSQ03393 145 aa8.05□□□□□ -1.12
SNHG1-217ENST00000541578 CLN3Q13286 438 aa8.05□□□□□ -1.12
SNHG1-217ENST00000541578 FOXD4L5Q5VV16 416 aaPredicted RBP8.05□□□□□ -1.12
SNHG1-217ENST00000541578 PLPP7Q8NBV4 271 aa8.05□□□□□ -1.12
SNHG1-217ENST00000541578 PPFIA3O75145 1194 aa8.04□□□□□ -1.12
SNHG1-217ENST00000541578 GPC1P35052 558 aa8.04□□□□□ -1.12
SNHG1-217ENST00000541578 HDGFL1Q5TGJ6 251 aa8.04□□□□□ -1.12
SNHG1-217ENST00000541578 LYSMD3Q7Z3D4 306 aa8.04□□□□□ -1.12
SNHG1-217ENST00000541578 PROSER2Q86WR7 435 aaPredicted RBP8.04□□□□□ -1.12
SNHG1-217ENST00000541578 IRF7Q92985 503 aa8.04□□□□□ -1.12
SNHG1-217ENST00000541578 ARHGEF10LQ9HCE6 1279 aa8.04□□□□□ -1.12
SNHG1-217ENST00000541578 A6NJR5 290 aa8.03□□□□□ -1.12
SNHG1-217ENST00000541578 PIK3CDO00329 1044 aa8.03□□□□□ -1.12
SNHG1-217ENST00000541578 FNBP4Q8N3X1 1017 aaPredicted RBP8.03□□□□□ -1.12
SNHG1-217ENST00000541578 NFATC2IPQ8NCF5 419 aa8.03□□□□□ -1.12
SNHG1-217ENST00000541578 ARXQ96QS3 562 aa8.03□□□□□ -1.12
SNHG1-217ENST00000541578 SKIP12755 728 aa8.02□□□□□ -1.13
SNHG1-217ENST00000541578 SLC27A3Q5K4L6 730 aa8.02□□□□□ -1.13
SNHG1-217ENST00000541578 PRICKLE2Q7Z3G6 844 aa8.02□□□□□ -1.13
SNHG1-217ENST00000541578 RAB6BQ9NRW1 208 aa8.02□□□□□ -1.13
SNHG1-217ENST00000541578 ESCO1Q5FWF5 840 aa8.01□□□□□ -1.13
SNHG1-217ENST00000541578 CCDC155Q8N6L0 562 aa8.01□□□□□ -1.13
SNHG1-217ENST00000541578 ADAMTS19Q8TE59 1207 aa8.01□□□□□ -1.13
SNHG1-217ENST00000541578 CNKSR1Q969H4 720 aa8.01□□□□□ -1.13
SNHG1-217ENST00000541578 XAGE2Q96GT9 111 aa8.01□□□□□ -1.13
SNHG1-217ENST00000541578 ESYT1Q9BSJ8 1104 aa8.01□□□□□ -1.13
SNHG1-217ENST00000541578 SLC35F4A4IF30 521 aa8□□□□□ -1.13
SNHG1-217ENST00000541578 LZTS3O60299 673 aaPredicted RBP8□□□□□ -1.13
SNHG1-217ENST00000541578 LCE2CQ5TA81 110 aa8□□□□□ -1.13
SNHG1-217ENST00000541578 GRIP2Q9C0E4 1043 aa8□□□□□ -1.13
SNHG1-217ENST00000541578 IL2RAP01589 272 aa7.99□□□□□ -1.13
SNHG1-217ENST00000541578 CENPCQ03188 943 aa7.99□□□□□ -1.13
SNHG1-217ENST00000541578 EML3Q32P44 896 aa7.99□□□□□ -1.13
SNHG1-217ENST00000541578 ERBB4Q15303 1308 aa7.99□□□□□ -1.13
SNHG1-217ENST00000541578 VSIG8P0DPA2 414 aa7.98□□□□□ -1.13
SNHG1-217ENST00000541578 RHOQP17081 205 aa7.98□□□□□ -1.13
SNHG1-217ENST00000541578 GMPRP36959 345 aa7.98□□□□□ -1.13
SNHG1-217ENST00000541578 POU4F2Q12837 409 aa7.98□□□□□ -1.13
SNHG1-217ENST00000541578 NOD1Q9Y239 953 aa7.98□□□□□ -1.13
SNHG1-217ENST00000541578 SENP3-EIF4A1A0A087X0R7 540 aa7.97□□□□□ -1.13
SNHG1-217ENST00000541578 WIPF1O43516 503 aa7.97□□□□□ -1.13
SNHG1-217ENST00000541578 ITGA6P23229 1130 aa7.97□□□□□ -1.13
SNHG1-217ENST00000541578 GTF2E1P29083 439 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-217ENST00000541578 ETNK1Q9HBU6 452 aa7.97□□□□□ -1.13
SNHG1-217ENST00000541578 USP17L5A8MUK1 530 aa7.96□□□□□ -1.14
SNHG1-217ENST00000541578 SPATA31C2B4DYI2 1134 aa7.96□□□□□ -1.14
SNHG1-217ENST00000541578 STAU1O95793 577 aaKnown RBP7.96□□□□□ -1.14
SNHG1-217ENST00000541578 WDR44Q5JSH3 913 aa7.96□□□□□ -1.14
SNHG1-217ENST00000541578 NBPF10Q6P3W6 841 aaKnown RBP7.96□□□□□ -1.14
SNHG1-217ENST00000541578 TBC1D9Q6ZT07 1266 aa7.96□□□□□ -1.14
SNHG1-217ENST00000541578 DEPDC4Q8N2C3 294 aa7.96□□□□□ -1.14
SNHG1-217ENST00000541578 NBPF15Q8N660 670 aa7.96□□□□□ -1.14
SNHG1-217ENST00000541578 GLMNQ92990 594 aa7.96□□□□□ -1.14
SNHG1-217ENST00000541578 ZSCAN10Q96SZ4 725 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-217ENST00000541578 HRH3Q9Y5N1 445 aa7.96□□□□□ -1.14
SNHG1-217ENST00000541578 ATP9BO43861 1147 aa7.95□□□□□ -1.14
SNHG1-217ENST00000541578 GDF10P55107 478 aa7.95□□□□□ -1.14
SNHG1-217ENST00000541578 NCOA4Q13772 614 aa7.95□□□□□ -1.14
SNHG1-217ENST00000541578 TMEM214Q6NUQ4 689 aaKnown RBP7.95□□□□□ -1.14
SNHG1-217ENST00000541578 TAS1R3Q7RTX0 852 aa7.95□□□□□ -1.14
SNHG1-217ENST00000541578 NANOS1Q8WY41 292 aaKnown RBP7.95□□□□□ -1.14
SNHG1-217ENST00000541578 CALR3Q96L12 384 aaKnown RBP7.95□□□□□ -1.14
SNHG1-217ENST00000541578 UCN2Q96RP3 112 aa7.95□□□□□ -1.14
SNHG1-217ENST00000541578 PCDHGA11Q9Y5H2 935 aa7.95□□□□□ -1.14
SNHG1-217ENST00000541578 INHAP05111 366 aa7.94□□□□□ -1.14
SNHG1-217ENST00000541578 SCNN1DP51172 638 aa7.94□□□□□ -1.14
SNHG1-217ENST00000541578 GTF2IP78347 998 aa7.94□□□□□ -1.14
SNHG1-217ENST00000541578 GNASQ5JWF2 1037 aa7.94□□□□□ -1.14
SNHG1-217ENST00000541578 VWA5B2Q8N398 1253 aa7.94□□□□□ -1.14
SNHG1-217ENST00000541578 FHDC1Q9C0D6 1143 aaPredicted RBP7.94□□□□□ -1.14
SNHG1-217ENST00000541578 DYRK1BQ9Y463 629 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms