RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 ABCA6Q8N139 1617 aa7.51□□□□□ -1.21
LMO3-225ENST00000541295 SMAPO00193 183 aa7.51□□□□□ -1.21
LMO3-225ENST00000541295 BRMS1Q9HCU9 246 aa7.51□□□□□ -1.21
LMO3-225ENST00000541295 CALCOCO1Q9P1Z2 691 aa7.51□□□□□ -1.21
LMO3-225ENST00000541295 PRAG1Q86YV5 1406 aa7.51□□□□□ -1.21
LMO3-225ENST00000541295 KCNV2Q8TDN2 545 aa7.51□□□□□ -1.21
LMO3-225ENST00000541295 MLH3Q9UHC1 1453 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 CEP152O94986 1710 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 ERICH4A6NGS2 130 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 PPP1R12AO14974 1030 aaPredicted RBP7.5□□□□□ -1.21
LMO3-225ENST00000541295 RAB11FIP3O75154 756 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 WDHD1O75717 1129 aaPredicted RBP7.5□□□□□ -1.21
LMO3-225ENST00000541295 DNAJC5Q9H3Z4 198 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 KDM5CP41229 1560 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 DIP2BQ9P265 1576 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 CNTLNQ9NXG0 1405 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.5□□□□□ -1.21
LMO3-225ENST00000541295 PAX7P23759 505 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 ERCC4Q92889 916 aaPredicted RBP7.5□□□□□ -1.21
LMO3-225ENST00000541295 FOXD4L1Q9NU39 408 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 TET3O43151 1660 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 UHRF1BP1Q6BDS2 1440 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 MAP3K4Q9Y6R4 1608 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 TNNT1P13805 278 aa7.5□□□□□ -1.21
LMO3-225ENST00000541295 ISY1Q9ULR0 285 aaKnown RBP7.5□□□□□ -1.21
LMO3-225ENST00000541295 TPX2Q9ULW0 747 aaKnown RBP7.5□□□□□ -1.21
LMO3-225ENST00000541295 GOLGA6L6A8MZA4 724 aa7.49□□□□□ -1.21
LMO3-225ENST00000541295 CASQ1P31415 396 aa7.49□□□□□ -1.21
LMO3-225ENST00000541295 MCCD1P59942 119 aaPredicted RBP7.49□□□□□ -1.21
LMO3-225ENST00000541295 SYNPO2Q9UMS6 1093 aa7.49□□□□□ -1.21
LMO3-225ENST00000541295 SPATA31E1Q6ZUB1 1445 aa7.49□□□□□ -1.21
LMO3-225ENST00000541295 PRDM15P57071 1507 aaPredicted RBP7.49□□□□□ -1.21
LMO3-225ENST00000541295 EXOC5O00471 708 aa7.49□□□□□ -1.21
LMO3-225ENST00000541295 ABCD1P33897 745 aa7.49□□□□□ -1.21
LMO3-225ENST00000541295 SLC26A8Q96RN1 970 aa7.49□□□□□ -1.21
LMO3-225ENST00000541295 FRMPD1Q5SYB0 1578 aa7.49□□□□□ -1.21
LMO3-225ENST00000541295 DEPDC5O75140 1603 aa7.49□□□□□ -1.21
LMO3-225ENST00000541295 CLTCL1P53675 1640 aa7.49□□□□□ -1.21
LMO3-225ENST00000541295 MROH1Q8NDA8 1641 aa7.49□□□□□ -1.21
LMO3-225ENST00000541295 SPHKAPQ2M3C7 1700 aa7.49□□□□□ -1.21
LMO3-225ENST00000541295 EIF2AK4Q9P2K8 1649 aaKnown RBP7.48□□□□□ -1.21
LMO3-225ENST00000541295 COPB2P35606 906 aa7.48□□□□□ -1.21
LMO3-225ENST00000541295 TRPM2O94759 1503 aa7.48□□□□□ -1.21
LMO3-225ENST00000541295 COQ9O75208 318 aa7.48□□□□□ -1.21
LMO3-225ENST00000541295 NFKBIBQ15653 356 aa7.48□□□□□ -1.21
LMO3-225ENST00000541295 ZC3H12AQ5D1E8 599 aaKnown RBP7.48□□□□□ -1.21
LMO3-225ENST00000541295 ARHGEF10LQ9HCE6 1279 aa7.48□□□□□ -1.21
LMO3-225ENST00000541295 PPP4R2Q9NY27 417 aa7.48□□□□□ -1.21
LMO3-225ENST00000541295 ABCF2Q9UG63 623 aa7.48□□□□□ -1.21
LMO3-225ENST00000541295 WWC3Q9ULE0 1092 aa7.48□□□□□ -1.21
LMO3-225ENST00000541295 DDX49Q9Y6V7 483 aaKnown RBP7.48□□□□□ -1.21
LMO3-225ENST00000541295 DIP2CQ9Y2E4 1556 aa7.48□□□□□ -1.21
LMO3-225ENST00000541295 HSCBQ8IWL3 235 aa7.48□□□□□ -1.21
LMO3-225ENST00000541295 GOLGA6L1Q8N7Z2 621 aa7.48□□□□□ -1.21
LMO3-225ENST00000541295 SPOCK3Q9BQ16 436 aa7.48□□□□□ -1.21
LMO3-225ENST00000541295 CTDP1Q9Y5B0 961 aaPredicted RBP7.48□□□□□ -1.21
LMO3-225ENST00000541295 PPRC1Q5VV67 1664 aaKnown RBP7.48□□□□□ -1.21
LMO3-225ENST00000541295 NPATQ14207 1427 aa7.48□□□□□ -1.21
LMO3-225ENST00000541295 DYNC1I1O14576 645 aa7.47□□□□□ -1.21
LMO3-225ENST00000541295 CACTIN-AS1Q8N1I8 211 aa7.47□□□□□ -1.21
LMO3-225ENST00000541295 EFCAB6Q5THR3 1501 aa7.47□□□□□ -1.21
LMO3-225ENST00000541295 BCORL1Q5H9F3 1711 aa7.47□□□□□ -1.21
LMO3-225ENST00000541295 CCT2P78371 535 aaKnown RBP7.47□□□□□ -1.21
LMO3-225ENST00000541295 CFAP70Q5T0N1 1121 aa7.47□□□□□ -1.21
LMO3-225ENST00000541295 KLHL33A6NCF5 533 aa7.47□□□□□ -1.21
LMO3-225ENST00000541295 PSMC1P62191 440 aaKnown RBP7.47□□□□□ -1.21
LMO3-225ENST00000541295 MRS2Q9HD23 443 aa7.47□□□□□ -1.21
LMO3-225ENST00000541295 MED4Q9NPJ6 270 aa7.47□□□□□ -1.21
LMO3-225ENST00000541295 STAG3Q9UJ98 1225 aa7.47□□□□□ -1.21
LMO3-225ENST00000541295 RICTORQ6R327 1708 aa7.47□□□□□ -1.21
LMO3-225ENST00000541295 GLI2P10070 1586 aa7.46□□□□□ -1.21
LMO3-225ENST00000541295 ADGRF5Q8IZF2 1346 aa7.46□□□□□ -1.21
LMO3-225ENST00000541295 SENP3-EIF4A1A0A087X0R7 540 aa7.46□□□□□ -1.21
LMO3-225ENST00000541295 RGL2O15211 777 aa7.46□□□□□ -1.21
LMO3-225ENST00000541295 RETREG2Q8NC44 543 aa7.46□□□□□ -1.21
LMO3-225ENST00000541295 SNRNP27Q8WVK2 155 aaKnown RBP7.46□□□□□ -1.21
LMO3-225ENST00000541295 RANBP17Q9H2T7 1088 aaKnown RBP7.46□□□□□ -1.21
LMO3-225ENST00000541295 ESF1Q9H501 851 aaKnown RBP7.46□□□□□ -1.21
LMO3-225ENST00000541295 PTPRTO14522 1441 aa7.46□□□□□ -1.21
LMO3-225ENST00000541295 TMCO5BA8MYB1 307 aa7.46□□□□□ -1.22
LMO3-225ENST00000541295 GOLGA6L22H0YM25 854 aa7.46□□□□□ -1.22
LMO3-225ENST00000541295 CDC37Q16543 378 aaPredicted RBP7.46□□□□□ -1.22
LMO3-225ENST00000541295 CCDC184Q52MB2 194 aa7.46□□□□□ -1.22
LMO3-225ENST00000541295 CHCHD3Q9NX63 227 aaKnown RBP7.46□□□□□ -1.22
LMO3-225ENST00000541295 VWDEQ8N2E2 1590 aa7.46□□□□□ -1.22
LMO3-225ENST00000541295 TRPM1Q7Z4N2 1603 aa7.46□□□□□ -1.22
LMO3-225ENST00000541295 OGFOD1Q8N543 542 aa7.46□□□□□ -1.22
LMO3-225ENST00000541295 BORCS6Q96GS4 357 aa7.46□□□□□ -1.22
LMO3-225ENST00000541295 NOL10Q9BSC4 688 aaKnown RBP7.46□□□□□ -1.22
LMO3-225ENST00000541295 SLC24A3Q9HC58 644 aa7.46□□□□□ -1.22
LMO3-225ENST00000541295 COMMD10Q9Y6G5 202 aa7.46□□□□□ -1.22
LMO3-225ENST00000541295 ZC3H4Q9UPT8 1303 aaKnown RBP7.45□□□□□ -1.22
LMO3-225ENST00000541295 PEX19P40855 299 aa7.45□□□□□ -1.22
LMO3-225ENST00000541295 HNRNPUQ00839 825 aaKnown RBP eCLIP7.45□□□□□ -1.22
LMO3-225ENST00000541295 C1QTNF12Q5T7M4 302 aa7.45□□□□□ -1.22
LMO3-225ENST00000541295 FBXO31Q5XUX0 539 aaPredicted RBP7.45□□□□□ -1.22
LMO3-225ENST00000541295 JMYQ8N9B5 988 aa7.45□□□□□ -1.22
LMO3-225ENST00000541295 PRKRIP1Q9H875 184 aaPredicted RBP7.45□□□□□ -1.22
LMO3-225ENST00000541295 ABCC3O15438 1527 aa7.45□□□□□ -1.22
LMO3-225ENST00000541295 CSB-PGBD3P0DP91 1061 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms