RNA–Protein interactions for RNA: ENST00000540503.1

PPFIBP1-212, Transcript of PPFIA binding protein 1, humanhuman

TSL 4

Gene PPFIBP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-212ENST00000540503 THSD7AQ9UPZ6 1657 aa13.65□□□□□ -0.22
PPFIBP1-212ENST00000540503 LRRC37A3O60309 1634 aa13.64□□□□□ -0.23
PPFIBP1-212ENST00000540503 GJD4Q96KN9 370 aaPredicted RBP13.64□□□□□ -0.23
PPFIBP1-212ENST00000540503 QTRT2Q9H974 415 aaKnown RBP13.64□□□□□ -0.23
PPFIBP1-212ENST00000540503 TNS2Q63HR2 1409 aa13.64□□□□□ -0.23
PPFIBP1-212ENST00000540503 AMOTQ4VCS5 1084 aa13.63□□□□□ -0.23
PPFIBP1-212ENST00000540503 PLEKHO1Q53GL0 409 aaPredicted RBP13.63□□□□□ -0.23
PPFIBP1-212ENST00000540503 GAS2L2Q8NHY3 880 aa13.63□□□□□ -0.23
PPFIBP1-212ENST00000540503 CCDC146Q8IYE0 955 aa13.62□□□□□ -0.23
PPFIBP1-212ENST00000540503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.62□□□□□ -0.234e-8■■■■■ 31
PPFIBP1-212ENST00000540503 SPG7Q9UQ90 795 aa13.62□□□□□ -0.23
PPFIBP1-212ENST00000540503 SHANK3Q9BYB0 1731 aa13.61□□□□□ -0.23
PPFIBP1-212ENST00000540503 DLG5Q8TDM6 1919 aa13.61□□□□□ -0.23
PPFIBP1-212ENST00000540503 A0A0G2JS52 829 aa13.61□□□□□ -0.23
PPFIBP1-212ENST00000540503 RBM6P78332 1123 aaKnown RBP13.61□□□□□ -0.23
PPFIBP1-212ENST00000540503 MYT1Q01538 1121 aa13.61□□□□□ -0.23
PPFIBP1-212ENST00000540503 PLEKHF1Q96S99 279 aa13.61□□□□□ -0.23
PPFIBP1-212ENST00000540503 PCDH11XQ9BZA7 1347 aa13.61□□□□□ -0.23
PPFIBP1-212ENST00000540503 PCDH11YQ9BZA8 1340 aa13.61□□□□□ -0.23
PPFIBP1-212ENST00000540503 FAM98CQ17RN3 349 aaKnown RBP13.6□□□□□ -0.23
PPFIBP1-212ENST00000540503 LMOD3Q0VAK6 560 aa13.59□□□□□ -0.23
PPFIBP1-212ENST00000540503 NFE2L2Q16236 605 aa13.59□□□□□ -0.23
PPFIBP1-212ENST00000540503 DDB1Q16531 1140 aa13.59□□□□□ -0.23
PPFIBP1-212ENST00000540503 C1orf141Q5JVX7 400 aa13.59□□□□□ -0.23
PPFIBP1-212ENST00000540503 ZNF530Q6P9A1 599 aaPredicted RBP13.59□□□□□ -0.23
PPFIBP1-212ENST00000540503 NGEFQ8N5V2 710 aa13.59□□□□□ -0.23
PPFIBP1-212ENST00000540503 ZCRB1Q8TBF4 217 aaKnown RBP13.59□□□□□ -0.23
PPFIBP1-212ENST00000540503 VIRMAQ69YN4 1812 aaKnown RBP13.58□□□□□ -0.24
PPFIBP1-212ENST00000540503 EXOC5O00471 708 aa13.58□□□□□ -0.24
PPFIBP1-212ENST00000540503 RXRBP28702 533 aa13.58□□□□□ -0.24
PPFIBP1-212ENST00000540503 MAP3K5Q99683 1374 aa13.58□□□□□ -0.24
PPFIBP1-212ENST00000540503 APAF1O14727 1248 aa13.57□□□□□ -0.24
PPFIBP1-212ENST00000540503 HSP90AB1P08238 724 aaKnown RBP13.57□□□□□ -0.24
PPFIBP1-212ENST00000540503 MTHFSDQ2M296 383 aaKnown RBP13.57□□□□□ -0.24
PPFIBP1-212ENST00000540503 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
PPFIBP1-212ENST00000540503 TMPOP42166 694 aaKnown RBP13.56□□□□□ -0.24
PPFIBP1-212ENST00000540503 NCBP3Q53F19 620 aaKnown RBP13.56□□□□□ -0.24
PPFIBP1-212ENST00000540503 AKAP4Q5JQC9 854 aa13.56□□□□□ -0.24
PPFIBP1-212ENST00000540503 IFNL2Q8IZJ0 200 aa13.56□□□□□ -0.24
PPFIBP1-212ENST00000540503 SCN11AQ9UI33 1791 aa13.55□□□□□ -0.24
PPFIBP1-212ENST00000540503 ONECUT3O60422 494 aaPredicted RBP13.55□□□□□ -0.24
PPFIBP1-212ENST00000540503 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
PPFIBP1-212ENST00000540503 RGS17Q9UGC6 210 aaPredicted RBP13.55□□□□□ -0.24
PPFIBP1-212ENST00000540503 BRWD3Q6RI45 1802 aa13.55□□□□□ -0.24
PPFIBP1-212ENST00000540503 ADAMTS7Q9UKP4 1686 aa13.54□□□□□ -0.24
PPFIBP1-212ENST00000540503 GNAT3A8MTJ3 354 aa13.54□□□□□ -0.24
PPFIBP1-212ENST00000540503 HTATSF1O43719 755 aaKnown RBP13.54□□□□□ -0.24
PPFIBP1-212ENST00000540503 PHKG2P15735 406 aa13.54□□□□□ -0.24
PPFIBP1-212ENST00000540503 RIPK4P57078 832 aa13.54□□□□□ -0.24
PPFIBP1-212ENST00000540503 HNRNPUQ00839 825 aaKnown RBP eCLIP13.54□□□□□ -0.24
PPFIBP1-212ENST00000540503 PDE3BQ13370 1112 aa13.54□□□□□ -0.24
PPFIBP1-212ENST00000540503 SEPT12Q8IYM1 358 aa13.54□□□□□ -0.24
PPFIBP1-212ENST00000540503 RGS12O14924 1447 aa13.54□□□□□ -0.24
PPFIBP1-212ENST00000540503 NEUROD2Q15784 382 aa13.53□□□□□ -0.24
PPFIBP1-212ENST00000540503 CCDC27Q2M243 656 aa13.53□□□□□ -0.24
PPFIBP1-212ENST00000540503 POTEAQ6S8J7 498 aa13.53□□□□□ -0.24
PPFIBP1-212ENST00000540503 DDX54Q8TDD1 881 aaKnown RBP13.53□□□□□ -0.24
PPFIBP1-212ENST00000540503 RRP7AQ9Y3A4 280 aaKnown RBP13.53□□□□□ -0.24
PPFIBP1-212ENST00000540503 DOT1LQ8TEK3 1739 aa13.53□□□□□ -0.24
PPFIBP1-212ENST00000540503 CYP27B1O15528 508 aa13.52□□□□□ -0.25
PPFIBP1-212ENST00000540503 CALD1Q05682 793 aaKnown RBP13.52□□□□□ -0.25
PPFIBP1-212ENST00000540503 TOGARAM1Q9Y4F4 1720 aa13.51□□□□□ -0.25
PPFIBP1-212ENST00000540503 MRC1P22897 1456 aa13.51□□□□□ -0.25
PPFIBP1-212ENST00000540503 DCAF5Q96JK2 942 aa13.51□□□□□ -0.25
PPFIBP1-212ENST00000540503 KDM6AO15550 1401 aaPredicted RBP13.5□□□□□ -0.25
PPFIBP1-212ENST00000540503 ZBED9Q6R2W3 1325 aa13.5□□□□□ -0.25
PPFIBP1-212ENST00000540503 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
PPFIBP1-212ENST00000540503 SIPA1L3O60292 1781 aaPredicted RBP13.5□□□□□ -0.25
PPFIBP1-212ENST00000540503 BCL9O00512 1426 aa13.49□□□□□ -0.25
PPFIBP1-212ENST00000540503 KRT27Q7Z3Y8 459 aa13.49□□□□□ -0.25
PPFIBP1-212ENST00000540503 YTHDC1Q96MU7 727 aaKnown RBP13.49□□□□□ -0.25
PPFIBP1-212ENST00000540503 SALL2Q9Y467 1007 aaPredicted RBP13.49□□□□□ -0.25
PPFIBP1-212ENST00000540503 NHSQ6T4R5 1651 aa13.49□□□□□ -0.25
PPFIBP1-212ENST00000540503 KAT6BQ8WYB5 2073 aa13.49□□□□□ -0.25
PPFIBP1-212ENST00000540503 ITGB4P16144 1822 aa13.48□□□□□ -0.25
PPFIBP1-212ENST00000540503 CEMIPQ8WUJ3 1361 aa13.48□□□□□ -0.25
PPFIBP1-212ENST00000540503 RNMTO43148 476 aaKnown RBP13.48□□□□□ -0.25
PPFIBP1-212ENST00000540503 TEFQ10587 303 aa13.48□□□□□ -0.25
PPFIBP1-212ENST00000540503 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
PPFIBP1-212ENST00000540503 MARCH10Q8NA82 808 aaPredicted RBP13.48□□□□□ -0.25
PPFIBP1-212ENST00000540503 TRIM35Q9UPQ4 493 aa13.48□□□□□ -0.25
PPFIBP1-212ENST00000540503 ERVV-2B6SEH9 535 aa13.47□□□□□ -0.25
PPFIBP1-212ENST00000540503 MCM10Q7L590 875 aa13.47□□□□□ -0.25
PPFIBP1-212ENST00000540503 WWC1Q8IX03 1113 aa13.47□□□□□ -0.25
PPFIBP1-212ENST00000540503 SBF2Q86WG5 1849 aa13.47□□□□□ -0.25
PPFIBP1-212ENST00000540503 IL16Q14005 1332 aa13.46□□□□□ -0.25
PPFIBP1-212ENST00000540503 SENP3-EIF4A1A0A087X0R7 540 aa13.46□□□□□ -0.25
PPFIBP1-212ENST00000540503 WDR63Q8IWG1 891 aa13.46□□□□□ -0.25
PPFIBP1-212ENST00000540503 KDM3BQ7LBC6 1761 aa13.45□□□□□ -0.26
PPFIBP1-212ENST00000540503 ZNF521Q96K83 1311 aa13.45□□□□□ -0.26
PPFIBP1-212ENST00000540503 CABP4P57796 275 aa13.45□□□□□ -0.26
PPFIBP1-212ENST00000540503 DCTN1Q14203 1278 aa13.45□□□□□ -0.26
PPFIBP1-212ENST00000540503 FAM196AQ6ZSG2 479 aa13.45□□□□□ -0.26
PPFIBP1-212ENST00000540503 PAPPAQ13219 1627 aa13.45□□□□□ -0.26
PPFIBP1-212ENST00000540503 GNAI1P63096 354 aa13.44□□□□□ -0.26
PPFIBP1-212ENST00000540503 GOLGA2Q08379 1002 aa13.44□□□□□ -0.26
PPFIBP1-212ENST00000540503 IL17REQ8NFR9 667 aa13.44□□□□□ -0.26
PPFIBP1-212ENST00000540503 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
PPFIBP1-212ENST00000540503 IFT57Q9NWB7 429 aa13.44□□□□□ -0.26
PPFIBP1-212ENST00000540503 BABAM1Q9NWV8 329 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms