RNA–Protein interactions for RNA: ENST00000540476.5

MDM1-211, Transcript of Mdm1 nuclear protein, humanhuman

TSL 4

Gene MDM1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-211ENST00000540476 LTV1Q96GA3 475 aaPredicted RBP13.67□□□□□ -0.22
MDM1-211ENST00000540476 PUS7Q96PZ0 661 aaKnown RBP13.67□□□□□ -0.22
MDM1-211ENST00000540476 CCNL1Q9UK58 526 aaPredicted RBP13.67□□□□□ -0.22
MDM1-211ENST00000540476 SLC24A1O60721 1099 aa13.66□□□□□ -0.22
MDM1-211ENST00000540476 ZCRB1Q8TBF4 217 aaKnown RBP13.66□□□□□ -0.22
MDM1-211ENST00000540476 COG3Q96JB2 828 aa13.66□□□□□ -0.22
MDM1-211ENST00000540476 SIN3AQ96ST3 1273 aa13.66□□□□□ -0.22
MDM1-211ENST00000540476 SLC12A5Q9H2X9 1139 aa13.66□□□□□ -0.22
MDM1-211ENST00000540476 RGPD5Q99666 1765 aa13.66□□□□□ -0.22
MDM1-211ENST00000540476 AMPHP49418 695 aa13.65□□□□□ -0.22
MDM1-211ENST00000540476 IFFO2Q5TF58 517 aa13.65□□□□□ -0.22
MDM1-211ENST00000540476 NLGN2Q8NFZ4 835 aa13.65□□□□□ -0.22
MDM1-211ENST00000540476 USP47Q96K76 1375 aa13.65□□□□□ -0.22
MDM1-211ENST00000540476 BTAF1O14981 1849 aa13.64□□□□□ -0.23
MDM1-211ENST00000540476 CHD4Q14839 1912 aa13.64□□□□□ -0.23
MDM1-211ENST00000540476 CD163L1Q9NR16 1453 aa13.64□□□□□ -0.23
MDM1-211ENST00000540476 A0A1W2PP64 1363 aa13.64□□□□□ -0.23
MDM1-211ENST00000540476 FLAD1Q8NFF5 587 aa13.64□□□□□ -0.23
MDM1-211ENST00000540476 MON2Q7Z3U7 1717 aa13.64□□□□□ -0.23
MDM1-211ENST00000540476 CGNL1Q0VF96 1302 aa13.64□□□□□ -0.23
MDM1-211ENST00000540476 KCNQ4P56696 695 aa13.63□□□□□ -0.23
MDM1-211ENST00000540476 USP54Q70EL1 1684 aa13.63□□□□□ -0.23
MDM1-211ENST00000540476 HOXC9P31274 260 aa13.62□□□□□ -0.23
MDM1-211ENST00000540476 RAPGEF4Q8WZA2 1011 aa13.61□□□□□ -0.23
MDM1-211ENST00000540476 GPBP1L1Q9HC44 474 aaPredicted RBP13.61□□□□□ -0.23
MDM1-211ENST00000540476 CD2APQ9Y5K6 639 aa13.61□□□□□ -0.23
MDM1-211ENST00000540476 MAP3K19Q56UN5 1328 aa13.61□□□□□ -0.23
MDM1-211ENST00000540476 YBX3P16989 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
MDM1-211ENST00000540476 SMG6Q86US8 1419 aaKnown RBP13.6□□□□□ -0.23
MDM1-211ENST00000540476 COL23A1Q86Y22 540 aaPredicted RBP13.6□□□□□ -0.23
MDM1-211ENST00000540476 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
MDM1-211ENST00000540476 NSD2O96028 1365 aa13.58□□□□□ -0.23
MDM1-211ENST00000540476 LTN1O94822 1766 aa13.58□□□□□ -0.23
MDM1-211ENST00000540476 ATP10DQ9P241 1426 aa13.58□□□□□ -0.24
MDM1-211ENST00000540476 MYCNP04198 464 aaPredicted RBP13.58□□□□□ -0.24
MDM1-211ENST00000540476 TATP17735 454 aaPredicted RBP13.58□□□□□ -0.24
MDM1-211ENST00000540476 MSL1Q68DK7 614 aa13.58□□□□□ -0.24
MDM1-211ENST00000540476 FAM208AQ9UK61 1670 aaKnown RBP13.58□□□□□ -0.24
MDM1-211ENST00000540476 QSER1Q2KHR3 1735 aa13.58□□□□□ -0.24
MDM1-211ENST00000540476 GOLGB1Q14789 3259 aaKnown RBP13.57□□□□□ -0.24
MDM1-211ENST00000540476 SMARCC1Q92922 1105 aaPredicted RBP13.57□□□□□ -0.24
MDM1-211ENST00000540476 PCDH11XQ9BZA7 1347 aa13.57□□□□□ -0.24
MDM1-211ENST00000540476 PCDH11YQ9BZA8 1340 aa13.57□□□□□ -0.24
MDM1-211ENST00000540476 NBPF6Q5VWK0 638 aa13.56□□□□□ -0.24
MDM1-211ENST00000540476 AK7Q96M32 723 aa13.56□□□□□ -0.24
MDM1-211ENST00000540476 NBPF4Q96M43 638 aa13.56□□□□□ -0.24
MDM1-211ENST00000540476 TONSLQ96HA7 1378 aa13.56□□□□□ -0.24
MDM1-211ENST00000540476 NSD3Q9BZ95 1437 aa13.56□□□□□ -0.24
MDM1-211ENST00000540476 MEGF6O75095 1541 aa13.55□□□□□ -0.24
MDM1-211ENST00000540476 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
MDM1-211ENST00000540476 KAT6BQ8WYB5 2073 aa13.55□□□□□ -0.24
MDM1-211ENST00000540476 PALLDQ8WX93 1383 aa13.55□□□□□ -0.24
MDM1-211ENST00000540476 CEP350Q5VT06 3117 aa13.55□□□□□ -0.24
MDM1-211ENST00000540476 SHANK3Q9BYB0 1731 aa13.54□□□□□ -0.24
MDM1-211ENST00000540476 RRS1Q15050 365 aaKnown RBP13.54□□□□□ -0.24
MDM1-211ENST00000540476 MPRIPQ6WCQ1 1025 aa13.54□□□□□ -0.24
MDM1-211ENST00000540476 COL24A1Q17RW2 1714 aa13.53□□□□□ -0.24
MDM1-211ENST00000540476 HSPA6P17066 643 aa13.53□□□□□ -0.24
MDM1-211ENST00000540476 USHBP1Q8N6Y0 703 aa13.53□□□□□ -0.24
MDM1-211ENST00000540476 ST20-MTHFSA0A0A6YYL1 179 aa13.52□□□□□ -0.25
MDM1-211ENST00000540476 FBLN1P23142 703 aa13.52□□□□□ -0.25
MDM1-211ENST00000540476 DOT1LQ8TEK3 1739 aa13.52□□□□□ -0.25
MDM1-211ENST00000540476 INSRP06213 1382 aa13.51□□□□□ -0.25
MDM1-211ENST00000540476 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
MDM1-211ENST00000540476 ZNF526Q8TF50 670 aaPredicted RBP13.51□□□□□ -0.25
MDM1-211ENST00000540476 TESK2Q96S53 571 aa13.51□□□□□ -0.25
MDM1-211ENST00000540476 LY75O60449 1722 aa13.5□□□□□ -0.25
MDM1-211ENST00000540476 ADCY9O60503 1353 aa13.5□□□□□ -0.25
MDM1-211ENST00000540476 FLT4P35916 1363 aa13.5□□□□□ -0.25
MDM1-211ENST00000540476 IGSF1Q8N6C5 1336 aa13.5□□□□□ -0.25
MDM1-211ENST00000540476 FYB1O15117 783 aa13.5□□□□□ -0.25
MDM1-211ENST00000540476 PHF14O94880 888 aa13.5□□□□□ -0.25
MDM1-211ENST00000540476 SSFA2P28290 1259 aa13.5□□□□□ -0.25
MDM1-211ENST00000540476 GGNBP2Q9H3C7 697 aa13.5□□□□□ -0.25
MDM1-211ENST00000540476 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.49□□□□□ -0.25
MDM1-211ENST00000540476 TMF1P82094 1093 aa13.49□□□□□ -0.25
MDM1-211ENST00000540476 CDCA8Q53HL2 280 aa13.49□□□□□ -0.25
MDM1-211ENST00000540476 SPG7Q9UQ90 795 aa13.49□□□□□ -0.25
MDM1-211ENST00000540476 CYP27B1O15528 508 aa13.48□□□□□ -0.25
MDM1-211ENST00000540476 HSP90AB2PQ58FF8 381 aa13.48□□□□□ -0.25
MDM1-211ENST00000540476 TUBGCP6Q96RT7 1819 aa13.46□□□□□ -0.25
MDM1-211ENST00000540476 LOC102724428A0A0B4J2F2 783 aa13.46□□□□□ -0.25
MDM1-211ENST00000540476 SIK1P57059 783 aa13.46□□□□□ -0.25
MDM1-211ENST00000540476 PIGBQ92521 554 aa13.46□□□□□ -0.25
MDM1-211ENST00000540476 RNF39Q9H2S5 420 aa13.46□□□□□ -0.25
MDM1-211ENST00000540476 TMOD3Q9NYL9 352 aa13.46□□□□□ -0.25
MDM1-211ENST00000540476 C5P01031 1676 aa13.45□□□□□ -0.26
MDM1-211ENST00000540476 GNPATO15228 680 aa13.45□□□□□ -0.26
MDM1-211ENST00000540476 APLP1P51693 650 aa13.45□□□□□ -0.26
MDM1-211ENST00000540476 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
MDM1-211ENST00000540476 WWC3Q9ULE0 1092 aa13.45□□□□□ -0.26
MDM1-211ENST00000540476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.26
MDM1-211ENST00000540476 PPM1GO15355 546 aaPredicted RBP13.43□□□□□ -0.26
MDM1-211ENST00000540476 ATP6V1AP38606 617 aa13.43□□□□□ -0.26
MDM1-211ENST00000540476 TGFB2P61812 414 aa13.43□□□□□ -0.26
MDM1-211ENST00000540476 NLGN1Q8N2Q7 840 aa13.43□□□□□ -0.26
MDM1-211ENST00000540476 C4BP0C0L5 1744 aa13.42□□□□□ -0.26
MDM1-211ENST00000540476 KIF3CO14782 793 aa13.42□□□□□ -0.26
MDM1-211ENST00000540476 TOMM70O94826 608 aa13.42□□□□□ -0.26
MDM1-211ENST00000540476 MMP10P09238 476 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms