RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 SMG6Q86US8 1419 aaKnown RBP18.18■□□□□ 0.5
SEMA4D-223ENST00000540475 ZCRB1Q8TBF4 217 aaKnown RBP18.18■□□□□ 0.5
SEMA4D-223ENST00000540475 DOT1LQ8TEK3 1739 aa18.18■□□□□ 0.5
SEMA4D-223ENST00000540475 HSPA5P11021 654 aaKnown RBP18.17■□□□□ 0.5
SEMA4D-223ENST00000540475 SLC15A2Q16348 729 aa18.17■□□□□ 0.5
SEMA4D-223ENST00000540475 DDX54Q8TDD1 881 aaKnown RBP18.17■□□□□ 0.5
SEMA4D-223ENST00000540475 SPON1Q9HCB6 807 aa18.17■□□□□ 0.5
SEMA4D-223ENST00000540475 QSER1Q2KHR3 1735 aa18.16■□□□□ 0.5
SEMA4D-223ENST00000540475 WASHC2AQ641Q2 1341 aa18.15■□□□□ 0.5
SEMA4D-223ENST00000540475 NSD2O96028 1365 aa18.15■□□□□ 0.5
SEMA4D-223ENST00000540475 PKD1L3Q7Z443 1732 aa18.15■□□□□ 0.5
SEMA4D-223ENST00000540475 PDGFDQ9GZP0 370 aaPredicted RBP18.14■□□□□ 0.49
SEMA4D-223ENST00000540475 STK32BQ9NY57 414 aa18.14■□□□□ 0.49
SEMA4D-223ENST00000540475 EMILIN1Q9Y6C2 1016 aa18.14■□□□□ 0.49
SEMA4D-223ENST00000540475 LRRC4BQ9NT99 713 aa18.13■□□□□ 0.49
SEMA4D-223ENST00000540475 PRIM1P49642 420 aaKnown RBP18.12■□□□□ 0.49
SEMA4D-223ENST00000540475 SLC27A3Q5K4L6 730 aa18.12■□□□□ 0.49
SEMA4D-223ENST00000540475 USHBP1Q8N6Y0 703 aa18.12■□□□□ 0.49
SEMA4D-223ENST00000540475 RAPGEF4Q8WZA2 1011 aa18.12■□□□□ 0.49
SEMA4D-223ENST00000540475 POLKQ9UBT6 870 aa18.12■□□□□ 0.49
SEMA4D-223ENST00000540475 TATP17735 454 aaPredicted RBP18.11■□□□□ 0.49
SEMA4D-223ENST00000540475 COL24A1Q17RW2 1714 aa18.11■□□□□ 0.49
SEMA4D-223ENST00000540475 ITGB4P16144 1822 aa18.1■□□□□ 0.49
SEMA4D-223ENST00000540475 PTGER2P43116 358 aa18.1■□□□□ 0.49
SEMA4D-223ENST00000540475 PANK3Q9H999 370 aa18.1■□□□□ 0.49
SEMA4D-223ENST00000540475 AKT1S1Q96B36 256 aa18.09■□□□□ 0.49
SEMA4D-223ENST00000540475 PLEKHG2Q9H7P9 1386 aa18.08■□□□□ 0.49
SEMA4D-223ENST00000540475 PCDH11XQ9BZA7 1347 aa18.08■□□□□ 0.49
SEMA4D-223ENST00000540475 PCDH11YQ9BZA8 1340 aa18.08■□□□□ 0.49
SEMA4D-223ENST00000540475 TUBGCP6Q96RT7 1819 aa18.08■□□□□ 0.48
SEMA4D-223ENST00000540475 SGIP1Q9BQI5 828 aa18.08■□□□□ 0.48
SEMA4D-223ENST00000540475 TOGARAM1Q9Y4F4 1720 aa18.07■□□□□ 0.48
SEMA4D-223ENST00000540475 ZNF827Q17R98 1081 aa18.07■□□□□ 0.48
SEMA4D-223ENST00000540475 MTFR1LQ9H019 292 aa18.07■□□□□ 0.48
SEMA4D-223ENST00000540475 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.07■□□□□ 0.48
SEMA4D-223ENST00000540475 CYP27B1O15528 508 aa18.06■□□□□ 0.48
SEMA4D-223ENST00000540475 NKX1-1Q15270 411 aaPredicted RBP18.06■□□□□ 0.48
SEMA4D-223ENST00000540475 EYA1Q99502 592 aa18.06■□□□□ 0.48
SEMA4D-223ENST00000540475 POLR3GLQ9BT43 218 aa18.06■□□□□ 0.48
SEMA4D-223ENST00000540475 ZBTB7AO95365 584 aa18.05■□□□□ 0.48
SEMA4D-223ENST00000540475 SYTL4Q96C24 671 aaPredicted RBP18.05■□□□□ 0.48
SEMA4D-223ENST00000540475 TAF1LQ8IZX4 1826 aa18.05■□□□□ 0.48
SEMA4D-223ENST00000540475 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
SEMA4D-223ENST00000540475 PPP1R1BQ9UD71 204 aaPredicted RBP18.04■□□□□ 0.48
SEMA4D-223ENST00000540475 UTRNP46939 3433 aa18.03■□□□□ 0.48
SEMA4D-223ENST00000540475 EIF4A2Q14240 407 aaKnown RBP18.02■□□□□ 0.48
SEMA4D-223ENST00000540475 SLC16A10Q8TF71 515 aa18.02■□□□□ 0.48
SEMA4D-223ENST00000540475 ATF5Q9Y2D1 282 aaPredicted RBP18.02■□□□□ 0.48
SEMA4D-223ENST00000540475 SPG7Q9UQ90 795 aa18.01■□□□□ 0.47
SEMA4D-223ENST00000540475 C5P01031 1676 aa18.01■□□□□ 0.47
SEMA4D-223ENST00000540475 PNPLA7Q6ZV29 1317 aa18■□□□□ 0.47
SEMA4D-223ENST00000540475 IGSF1Q8N6C5 1336 aa18■□□□□ 0.47
SEMA4D-223ENST00000540475 HMGB2P26583 209 aaKnown RBP18■□□□□ 0.47
SEMA4D-223ENST00000540475 KIF7Q2M1P5 1343 aa17.99■□□□□ 0.47
SEMA4D-223ENST00000540475 TNNT2P45379 298 aaPredicted RBP17.99■□□□□ 0.47
SEMA4D-223ENST00000540475 CCNL1Q9UK58 526 aaPredicted RBP17.99■□□□□ 0.47
SEMA4D-223ENST00000540475 KCNQ4P56696 695 aa17.98■□□□□ 0.47
SEMA4D-223ENST00000540475 AMER1Q5JTC6 1135 aaPredicted RBP17.98■□□□□ 0.47
SEMA4D-223ENST00000540475 MAP3K5Q99683 1374 aa17.98■□□□□ 0.47
SEMA4D-223ENST00000540475 PER1O15534 1290 aaPredicted RBP17.97■□□□□ 0.47
SEMA4D-223ENST00000540475 PHKG2P15735 406 aa17.97■□□□□ 0.47
SEMA4D-223ENST00000540475 KNSTRNQ9Y448 316 aa17.97■□□□□ 0.47
SEMA4D-223ENST00000540475 MPRIPQ6WCQ1 1025 aa17.96■□□□□ 0.47
SEMA4D-223ENST00000540475 MORC1Q86VD1 984 aa17.96■□□□□ 0.47
SEMA4D-223ENST00000540475 IFNL2Q8IZJ0 200 aa17.96■□□□□ 0.47
SEMA4D-223ENST00000540475 SMARCC1Q92922 1105 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-223ENST00000540475 SYT17Q9BSW7 474 aa17.96■□□□□ 0.47
SEMA4D-223ENST00000540475 TFCP2L1Q9NZI6 479 aa17.96■□□□□ 0.47
SEMA4D-223ENST00000540475 PALLDQ8WX93 1383 aa17.95■□□□□ 0.46
SEMA4D-223ENST00000540475 PIGBQ92521 554 aa17.95■□□□□ 0.46
SEMA4D-223ENST00000540475 ARXQ96QS3 562 aa17.95■□□□□ 0.46
SEMA4D-223ENST00000540475 FHDC1Q9C0D6 1143 aaPredicted RBP17.94■□□□□ 0.46
SEMA4D-223ENST00000540475 ZNF831Q5JPB2 1677 aa17.93■□□□□ 0.46
SEMA4D-223ENST00000540475 UBR3Q6ZT12 1888 aa17.93■□□□□ 0.46
SEMA4D-223ENST00000540475 C4BP0C0L5 1744 aa17.93■□□□□ 0.46
SEMA4D-223ENST00000540475 KDRP35968 1356 aa17.92■□□□□ 0.46
SEMA4D-223ENST00000540475 GOLGB1Q14789 3259 aaKnown RBP17.92■□□□□ 0.46
SEMA4D-223ENST00000540475 IL13P35225 146 aa17.91■□□□□ 0.46
SEMA4D-223ENST00000540475 COL23A1Q86Y22 540 aaPredicted RBP17.91■□□□□ 0.46
SEMA4D-223ENST00000540475 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
SEMA4D-223ENST00000540475 ERVV-2B6SEH9 535 aa17.9■□□□□ 0.46
SEMA4D-223ENST00000540475 AMOTQ4VCS5 1084 aa17.9■□□□□ 0.46
SEMA4D-223ENST00000540475 NPC1L1Q9UHC9 1359 aa17.9■□□□□ 0.46
SEMA4D-223ENST00000540475 PLEKHO1Q53GL0 409 aaPredicted RBP17.89■□□□□ 0.45
SEMA4D-223ENST00000540475 FLAD1Q8NFF5 587 aa17.89■□□□□ 0.45
SEMA4D-223ENST00000540475 TMOD3Q9NYL9 352 aa17.89■□□□□ 0.45
SEMA4D-223ENST00000540475 CHD4Q14839 1912 aa17.89■□□□□ 0.45
SEMA4D-223ENST00000540475 LOC102724428A0A0B4J2F2 783 aa17.88■□□□□ 0.45
SEMA4D-223ENST00000540475 HSP90AB1P08238 724 aaKnown RBP17.88■□□□□ 0.45
SEMA4D-223ENST00000540475 POLD1P28340 1107 aa17.88■□□□□ 0.45
SEMA4D-223ENST00000540475 SIK1P57059 783 aa17.88■□□□□ 0.45
SEMA4D-223ENST00000540475 DCAF5Q96JK2 942 aa17.88■□□□□ 0.45
SEMA4D-223ENST00000540475 SCN11AQ9UI33 1791 aa17.87■□□□□ 0.45
SEMA4D-223ENST00000540475 ATG3Q9NT62 314 aa17.87■□□□□ 0.45
SEMA4D-223ENST00000540475 ASAP1Q9ULH1 1129 aa17.87■□□□□ 0.45
SEMA4D-223ENST00000540475 AEBP1Q8IUX7 1158 aa17.86■□□□□ 0.45
SEMA4D-223ENST00000540475 KDM6AO15550 1401 aaPredicted RBP17.86■□□□□ 0.45
SEMA4D-223ENST00000540475 VIRMAQ69YN4 1812 aaKnown RBP17.86■□□□□ 0.45
SEMA4D-223ENST00000540475 COL5A3P25940 1745 aaPredicted RBP17.85■□□□□ 0.45
SEMA4D-223ENST00000540475 MTHFSP49914 203 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms