RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 DISP2A7MBM2 1401 aa15.73■□□□□ 0.11
CYB561A3-215ENST00000540317 LTN1O94822 1766 aa15.73■□□□□ 0.11
CYB561A3-215ENST00000540317 CFAP53Q96M91 514 aa15.73■□□□□ 0.11
CYB561A3-215ENST00000540317 R3HDM1Q15032 1099 aaKnown RBP15.71■□□□□ 0.11
CYB561A3-215ENST00000540317 BCL11BQ9C0K0 894 aaPredicted RBP15.71■□□□□ 0.11
CYB561A3-215ENST00000540317 PTF1AQ7RTS3 328 aa15.7■□□□□ 0.1
CYB561A3-215ENST00000540317 LRRC37A3O60309 1634 aa15.7■□□□□ 0.1
CYB561A3-215ENST00000540317 PPM1GO15355 546 aaPredicted RBP15.69■□□□□ 0.1
CYB561A3-215ENST00000540317 NBPF14Q5TI25 921 aa15.69■□□□□ 0.1
CYB561A3-215ENST00000540317 DDX54Q8TDD1 881 aaKnown RBP15.69■□□□□ 0.1
CYB561A3-215ENST00000540317 TNS1Q9HBL0 1735 aaKnown RBP15.69■□□□□ 0.1
CYB561A3-215ENST00000540317 PPP4R2Q9NY27 417 aa15.69■□□□□ 0.1
CYB561A3-215ENST00000540317 PLSCR1O15162 318 aa15.68■□□□□ 0.1
CYB561A3-215ENST00000540317 HSP90AB2PQ58FF8 381 aa15.68■□□□□ 0.1
CYB561A3-215ENST00000540317 ACSBG1Q96GR2 724 aa15.68■□□□□ 0.1
CYB561A3-215ENST00000540317 TNS2Q63HR2 1409 aa15.67■□□□□ 0.1
CYB561A3-215ENST00000540317 RTL1A6NKG5 1358 aa15.67■□□□□ 0.1
CYB561A3-215ENST00000540317 ANKRD26Q9UPS8 1709 aa15.66■□□□□ 0.1
CYB561A3-215ENST00000540317 KCNQ2O43526 872 aa15.66■□□□□ 0.1
CYB561A3-215ENST00000540317 MTHFSP49914 203 aa15.66■□□□□ 0.1
CYB561A3-215ENST00000540317 NBPF6Q5VWK0 638 aa15.66■□□□□ 0.1
CYB561A3-215ENST00000540317 NBPF4Q96M43 638 aa15.66■□□□□ 0.1
CYB561A3-215ENST00000540317 EMILIN1Q9Y6C2 1016 aa15.66■□□□□ 0.1
CYB561A3-215ENST00000540317 TNNT2P45379 298 aaPredicted RBP15.66■□□□□ 0.1
CYB561A3-215ENST00000540317 USHBP1Q8N6Y0 703 aa15.66■□□□□ 0.1
CYB561A3-215ENST00000540317 SALL2Q9Y467 1007 aaPredicted RBP15.66■□□□□ 0.1
CYB561A3-215ENST00000540317 PEAK1Q9H792 1746 aa15.65■□□□□ 0.1
CYB561A3-215ENST00000540317 BCL9O00512 1426 aa15.65■□□□□ 0.1
CYB561A3-215ENST00000540317 ZNF521Q96K83 1311 aa15.65■□□□□ 0.1
CYB561A3-215ENST00000540317 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
CYB561A3-215ENST00000540317 RCAN3Q9UKA8 241 aa15.65■□□□□ 0.1
CYB561A3-215ENST00000540317 FLT4P35916 1363 aa15.64■□□□□ 0.09
CYB561A3-215ENST00000540317 RAPGEF4Q8WZA2 1011 aa15.64■□□□□ 0.09
CYB561A3-215ENST00000540317 WNK3Q9BYP7 1800 aa15.64■□□□□ 0.09
CYB561A3-215ENST00000540317 GOLGA2Q08379 1002 aa15.63■□□□□ 0.09
CYB561A3-215ENST00000540317 ZCRB1Q8TBF4 217 aaKnown RBP15.63■□□□□ 0.09
CYB561A3-215ENST00000540317 IRX6P78412 446 aaPredicted RBP15.62■□□□□ 0.09
CYB561A3-215ENST00000540317 RUNDC1Q96C34 613 aa15.62■□□□□ 0.09
CYB561A3-215ENST00000540317 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
CYB561A3-215ENST00000540317 SENP3-EIF4A1A0A087X0R7 540 aa15.62■□□□□ 0.09
CYB561A3-215ENST00000540317 PROM2Q8N271 834 aa15.62■□□□□ 0.09
CYB561A3-215ENST00000540317 KIF20BQ96Q89 1820 aa15.62■□□□□ 0.09
CYB561A3-215ENST00000540317 TATP17735 454 aaPredicted RBP15.61■□□□□ 0.09
CYB561A3-215ENST00000540317 TXNRD1Q16881 649 aa15.61■□□□□ 0.09
CYB561A3-215ENST00000540317 SYTL4Q96C24 671 aaPredicted RBP15.61■□□□□ 0.09
CYB561A3-215ENST00000540317 CDCA7LQ96GN5 454 aa15.61■□□□□ 0.09
CYB561A3-215ENST00000540317 POLKQ9UBT6 870 aa15.61■□□□□ 0.09
CYB561A3-215ENST00000540317 APAF1O14727 1248 aa15.6■□□□□ 0.09
CYB561A3-215ENST00000540317 RRP1P56182 461 aaKnown RBP15.6■□□□□ 0.09
CYB561A3-215ENST00000540317 CCDC146Q8IYE0 955 aa15.6■□□□□ 0.09
CYB561A3-215ENST00000540317 SBF2Q86WG5 1849 aa15.6■□□□□ 0.09
CYB561A3-215ENST00000540317 KAT6BQ8WYB5 2073 aa15.59■□□□□ 0.09
CYB561A3-215ENST00000540317 FAM208AQ9UK61 1670 aaKnown RBP15.58■□□□□ 0.09
CYB561A3-215ENST00000540317 PNNQ9H307 717 aaKnown RBP15.58■□□□□ 0.09
CYB561A3-215ENST00000540317 E9PSI1 815 aa15.58■□□□□ 0.08
CYB561A3-215ENST00000540317 PRIM1P49642 420 aaKnown RBP15.58■□□□□ 0.08
CYB561A3-215ENST00000540317 SLFN5Q08AF3 891 aa15.58■□□□□ 0.08
CYB561A3-215ENST00000540317 DUSP27Q5VZP5 1158 aa15.58■□□□□ 0.08
CYB561A3-215ENST00000540317 MEGF6O75095 1541 aa15.57■□□□□ 0.08
CYB561A3-215ENST00000540317 TRMT2AQ8IZ69 625 aaKnown RBP15.57■□□□□ 0.08
CYB561A3-215ENST00000540317 RGPD2P0DJD1 1756 aa15.56■□□□□ 0.08
CYB561A3-215ENST00000540317 CCDC27Q2M243 656 aa15.56■□□□□ 0.08
CYB561A3-215ENST00000540317 ANO8Q9HCE9 1232 aaPredicted RBP15.56■□□□□ 0.08
CYB561A3-215ENST00000540317 STK32BQ9NY57 414 aa15.56■□□□□ 0.08
CYB561A3-215ENST00000540317 RREB1Q92766 1687 aa15.55■□□□□ 0.08
CYB561A3-215ENST00000540317 EYA1Q99502 592 aa15.55■□□□□ 0.08
CYB561A3-215ENST00000540317 NUP188Q5SRE5 1749 aa15.55■□□□□ 0.08
CYB561A3-215ENST00000540317 U2AF1L5P0DN76 240 aaPredicted RBP15.54■□□□□ 0.08
CYB561A3-215ENST00000540317 U2AF1Q01081 240 aaKnown RBP eCLIP15.54■□□□□ 0.08
CYB561A3-215ENST00000540317 COL3A1P02461 1466 aaPredicted RBP15.54■□□□□ 0.08
CYB561A3-215ENST00000540317 WDR63Q8IWG1 891 aa15.53■□□□□ 0.08
CYB561A3-215ENST00000540317 PCDH11XQ9BZA7 1347 aa15.53■□□□□ 0.08
CYB561A3-215ENST00000540317 PCDH11YQ9BZA8 1340 aa15.53■□□□□ 0.08
CYB561A3-215ENST00000540317 DIAPH1O60610 1272 aaKnown RBP15.53■□□□□ 0.08
CYB561A3-215ENST00000540317 EIF4A2Q14240 407 aaKnown RBP15.53■□□□□ 0.08
CYB561A3-215ENST00000540317 SLC15A2Q16348 729 aa15.53■□□□□ 0.08
CYB561A3-215ENST00000540317 WWC1Q8IX03 1113 aa15.53■□□□□ 0.08
CYB561A3-215ENST00000540317 SPON1Q9HCB6 807 aa15.53■□□□□ 0.08
CYB561A3-215ENST00000540317 MAP2P11137 1827 aaKnown RBP15.52■□□□□ 0.07
CYB561A3-215ENST00000540317 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.52■□□□□ 0.07
CYB561A3-215ENST00000540317 SPG7Q9UQ90 795 aa15.52■□□□□ 0.07
CYB561A3-215ENST00000540317 NHSQ6T4R5 1651 aa15.52■□□□□ 0.07
CYB561A3-215ENST00000540317 CYP27B1O15528 508 aa15.51■□□□□ 0.07
CYB561A3-215ENST00000540317 PDGFDQ9GZP0 370 aaPredicted RBP15.51■□□□□ 0.07
CYB561A3-215ENST00000540317 RGPD3A6NKT7 1758 aaPredicted RBP15.51■□□□□ 0.07
CYB561A3-215ENST00000540317 RGPD4Q7Z3J3 1758 aa15.51■□□□□ 0.07
CYB561A3-215ENST00000540317 LRRC4BQ9NT99 713 aa15.5■□□□□ 0.07
CYB561A3-215ENST00000540317 PPP1R1BQ9UD71 204 aaPredicted RBP15.5■□□□□ 0.07
CYB561A3-215ENST00000540317 KCNQ4P56696 695 aa15.49■□□□□ 0.07
CYB561A3-215ENST00000540317 SLC27A3Q5K4L6 730 aa15.49■□□□□ 0.07
CYB561A3-215ENST00000540317 MPRIPQ6WCQ1 1025 aa15.49■□□□□ 0.07
CYB561A3-215ENST00000540317 LRP5O75197 1615 aa15.49■□□□□ 0.07
CYB561A3-215ENST00000540317 U2SURPO15042 1029 aaKnown RBP15.49■□□□□ 0.07
CYB561A3-215ENST00000540317 ZBTB7AO95365 584 aa15.49■□□□□ 0.07
CYB561A3-215ENST00000540317 CCDC136Q96JN2 1154 aa15.49■□□□□ 0.07
CYB561A3-215ENST00000540317 BTAF1O14981 1849 aa15.48■□□□□ 0.07
CYB561A3-215ENST00000540317 MAPK8IP3Q9UPT6 1336 aa15.48■□□□□ 0.07
CYB561A3-215ENST00000540317 FCHSD2O94868 740 aa15.48■□□□□ 0.07
CYB561A3-215ENST00000540317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.48■□□□□ 0.07
CYB561A3-215ENST00000540317 B4GALNT3Q6L9W6 998 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms