RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 RRP15Q9Y3B9 282 aaKnown RBP13.07□□□□□ -0.32
PBX1-212ENST00000540236 NAIPQ13075 1403 aa13.07□□□□□ -0.32
PBX1-212ENST00000540236 MPHOSPH10O00566 681 aaKnown RBP13.07□□□□□ -0.32
PBX1-212ENST00000540236 TRIM27P14373 513 aa13.07□□□□□ -0.32
PBX1-212ENST00000540236 RAI14Q9P0K7 980 aa13.07□□□□□ -0.32
PBX1-212ENST00000540236 HSP90AA4PQ58FG1 418 aa13.07□□□□□ -0.32
PBX1-212ENST00000540236 ATP2B2Q01814 1243 aa13.07□□□□□ -0.32
PBX1-212ENST00000540236 UVSSAQ2YD98 709 aa13.07□□□□□ -0.32
PBX1-212ENST00000540236 DNAJC21Q5F1R6 531 aaKnown RBP13.07□□□□□ -0.32
PBX1-212ENST00000540236 FAM107BQ9H098 131 aa13.07□□□□□ -0.32
PBX1-212ENST00000540236 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.07□□□□□ -0.32
PBX1-212ENST00000540236 PTPRKQ15262 1439 aa13.06□□□□□ -0.32
PBX1-212ENST00000540236 ATF7IPQ6VMQ6 1270 aa13.06□□□□□ -0.32
PBX1-212ENST00000540236 STK26Q9P289 416 aa13.06□□□□□ -0.32
PBX1-212ENST00000540236 SPATA32Q96LK8 384 aa13.06□□□□□ -0.32
PBX1-212ENST00000540236 RUFY1Q96T51 708 aa13.06□□□□□ -0.32
PBX1-212ENST00000540236 CDR1P51861 262 aa13.06□□□□□ -0.32
PBX1-212ENST00000540236 CAGE1Q8TC20 777 aa13.06□□□□□ -0.32
PBX1-212ENST00000540236 HFM1A2PYH4 1435 aa13.06□□□□□ -0.32
PBX1-212ENST00000540236 HMOX1P09601 288 aa13.05□□□□□ -0.32
PBX1-212ENST00000540236 CT47B1P0C2W7 299 aaPredicted RBP13.05□□□□□ -0.32
PBX1-212ENST00000540236 SERPINC1P01008 464 aa13.05□□□□□ -0.32
PBX1-212ENST00000540236 MX1P20591 662 aa13.05□□□□□ -0.32
PBX1-212ENST00000540236 RNF20Q5VTR2 975 aa13.05□□□□□ -0.32
PBX1-212ENST00000540236 PTPN23Q9H3S7 1636 aa13.05□□□□□ -0.32
PBX1-212ENST00000540236 HNRNPMP52272 730 aaKnown RBP eCLIP13.05□□□□□ -0.32
PBX1-212ENST00000540236 DNM1Q05193 864 aaKnown RBP13.05□□□□□ -0.32
PBX1-212ENST00000540236 SCLT1Q96NL6 688 aa13.05□□□□□ -0.32
PBX1-212ENST00000540236 ACBD3Q9H3P7 528 aa13.05□□□□□ -0.32
PBX1-212ENST00000540236 PUF60Q9UHX1 559 aaKnown RBP13.05□□□□□ -0.32
PBX1-212ENST00000540236 SSH1Q8WYL5 1049 aa13.04□□□□□ -0.32
PBX1-212ENST00000540236 FKBP5Q13451 457 aaPredicted RBP13.04□□□□□ -0.32
PBX1-212ENST00000540236 GBP6Q6ZN66 633 aa13.04□□□□□ -0.32
PBX1-212ENST00000540236 FEZ2Q9UHY8 353 aaPredicted RBP13.04□□□□□ -0.32
PBX1-212ENST00000540236 BIN1O00499 593 aa13.04□□□□□ -0.32
PBX1-212ENST00000540236 FBXO38Q6PIJ6 1188 aa13.04□□□□□ -0.32
PBX1-212ENST00000540236 SDF4Q9BRK5 362 aa13.04□□□□□ -0.32
PBX1-212ENST00000540236 LRRCC1Q9C099 1032 aa13.04□□□□□ -0.32
PBX1-212ENST00000540236 STAG3Q9UJ98 1225 aa13.04□□□□□ -0.32
PBX1-212ENST00000540236 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
PBX1-212ENST00000540236 NUCB1Q02818 461 aa13.03□□□□□ -0.32
PBX1-212ENST00000540236 ZCCHC17Q9NP64 241 aaKnown RBP13.03□□□□□ -0.32
PBX1-212ENST00000540236 DHX16O60231 1041 aaKnown RBP13.03□□□□□ -0.32
PBX1-212ENST00000540236 SUFUQ9UMX1 484 aa13.03□□□□□ -0.32
PBX1-212ENST00000540236 JRKLQ9Y4A0 524 aa13.03□□□□□ -0.32
PBX1-212ENST00000540236 BIRC2Q13490 618 aa13.03□□□□□ -0.32
PBX1-212ENST00000540236 ZNF622Q969S3 477 aaKnown RBP eCLIP13.03□□□□□ -0.32
PBX1-212ENST00000540236 DISP3Q9P2K9 1392 aa13.03□□□□□ -0.32
PBX1-212ENST00000540236 EIF3JO75822 258 aaKnown RBP13.03□□□□□ -0.32
PBX1-212ENST00000540236 SLFN14P0C7P3 912 aa13.03□□□□□ -0.32
PBX1-212ENST00000540236 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.03□□□□□ -0.32
PBX1-212ENST00000540236 ANKRD30AQ9BXX3 1397 aa13.03□□□□□ -0.32
PBX1-212ENST00000540236 MYO1CO00159 1063 aa13.02□□□□□ -0.32
PBX1-212ENST00000540236 TPM1P09493 284 aa13.02□□□□□ -0.32
PBX1-212ENST00000540236 LIG3P49916 1009 aa13.02□□□□□ -0.32
PBX1-212ENST00000540236 NAA25Q14CX7 972 aa13.02□□□□□ -0.32
PBX1-212ENST00000540236 KMT5BQ4FZB7 885 aa13.02□□□□□ -0.32
PBX1-212ENST00000540236 LARP1BQ659C4 914 aaKnown RBP13.02□□□□□ -0.32
PBX1-212ENST00000540236 MTHFSP49914 203 aa13.02□□□□□ -0.33
PBX1-212ENST00000540236 SF3A3Q12874 501 aaKnown RBP eCLIP13.02□□□□□ -0.33
PBX1-212ENST00000540236 TTC19Q6DKK2 380 aaPredicted RBP13.02□□□□□ -0.33
PBX1-212ENST00000540236 CCDC73Q6ZRK6 1079 aa13.02□□□□□ -0.33
PBX1-212ENST00000540236 SMARCE1Q969G3 411 aa13.02□□□□□ -0.33
PBX1-212ENST00000540236 CCDC69A6NI79 296 aa13.02□□□□□ -0.33
PBX1-212ENST00000540236 RHOXF2BP0C7M4 288 aa13.02□□□□□ -0.33
PBX1-212ENST00000540236 PEX19P40855 299 aa13.02□□□□□ -0.33
PBX1-212ENST00000540236 RHOXF2Q9BQY4 288 aa13.02□□□□□ -0.33
PBX1-212ENST00000540236 SPAG9O60271 1321 aaKnown RBP13.02□□□□□ -0.33
PBX1-212ENST00000540236 GCC1Q96CN9 775 aa13.01□□□□□ -0.33
PBX1-212ENST00000540236 TRAK1Q9UPV9 953 aa13.01□□□□□ -0.33
PBX1-212ENST00000540236 USP8P40818 1118 aa13.01□□□□□ -0.33
PBX1-212ENST00000540236 PTPN21Q16825 1174 aa13.01□□□□□ -0.33
PBX1-212ENST00000540236 DDX11Q96FC9 970 aa13.01□□□□□ -0.33
PBX1-212ENST00000540236 EPC1Q9H2F5 836 aa13.01□□□□□ -0.33
PBX1-212ENST00000540236 EFCC1Q9HA90 598 aa13.01□□□□□ -0.33
PBX1-212ENST00000540236 GJB2P29033 226 aa13.01□□□□□ -0.33
PBX1-212ENST00000540236 GBP2P32456 591 aaPredicted RBP13.01□□□□□ -0.33
PBX1-212ENST00000540236 ICE2Q659A1 982 aa13.01□□□□□ -0.33
PBX1-212ENST00000540236 ST5P78524 1137 aa13.01□□□□□ -0.33
PBX1-212ENST00000540236 MYOM3Q5VTT5 1437 aa13.01□□□□□ -0.33
PBX1-212ENST00000540236 FKBP15Q5T1M5 1219 aa13.01□□□□□ -0.33
PBX1-212ENST00000540236 THUMPD2Q9BTF0 503 aaKnown RBP13□□□□□ -0.33
PBX1-212ENST00000540236 DDX41Q9UJV9 622 aaKnown RBP13□□□□□ -0.33
PBX1-212ENST00000540236 CTR9Q6PD62 1173 aa13□□□□□ -0.33
PBX1-212ENST00000540236 KIF21AQ7Z4S6 1674 aa13□□□□□ -0.33
PBX1-212ENST00000540236 CARD6Q9BX69 1037 aa13□□□□□ -0.33
PBX1-212ENST00000540236 SIL1Q9H173 461 aa13□□□□□ -0.33
PBX1-212ENST00000540236 KIF4AO95239 1232 aa12.99□□□□□ -0.33
PBX1-212ENST00000540236 JAKMIP3Q5VZ66 844 aa12.99□□□□□ -0.33
PBX1-212ENST00000540236 NECAB1Q8N987 351 aa12.99□□□□□ -0.33
PBX1-212ENST00000540236 ARID4AP29374 1257 aaPredicted RBP12.99□□□□□ -0.33
PBX1-212ENST00000540236 ZNF165P49910 485 aa12.99□□□□□ -0.33
PBX1-212ENST00000540236 GPRASP1Q5JY77 1395 aa12.99□□□□□ -0.33
PBX1-212ENST00000540236 NINLQ9Y2I6 1382 aa12.99□□□□□ -0.33
PBX1-212ENST00000540236 A0A087WWV3 80 aa12.99□□□□□ -0.33
PBX1-212ENST00000540236 IVLP07476 585 aa12.99□□□□□ -0.33
PBX1-212ENST00000540236 TYRO3Q06418 890 aa12.99□□□□□ -0.33
PBX1-212ENST00000540236 ARID5BQ14865 1188 aa12.99□□□□□ -0.33
PBX1-212ENST00000540236 ZSCAN25Q6NSZ9 544 aa12.99□□□□□ -0.33
PBX1-212ENST00000540236 ERO1AQ96HE7 468 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms