RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 NASPP49321 788 aaPredicted RBP10.78□□□□□ -0.68
DDB1-217ENST00000540166 ACSBG1Q96GR2 724 aa10.78□□□□□ -0.68
DDB1-217ENST00000540166 ANKARQ7Z5J8 1434 aa10.77□□□□□ -0.68
DDB1-217ENST00000540166 NME9Q86XW9 330 aa10.77□□□□□ -0.69
DDB1-217ENST00000540166 CCDC173Q0VFZ6 552 aa10.77□□□□□ -0.69
DDB1-217ENST00000540166 ZSCAN30Q86W11 494 aa10.77□□□□□ -0.69
DDB1-217ENST00000540166 SETBP1Q9Y6X0 1596 aa10.77□□□□□ -0.69
DDB1-217ENST00000540166 PPP2R1AP30153 589 aa10.77□□□□□ -0.69
DDB1-217ENST00000540166 COG6Q9Y2V7 657 aa10.77□□□□□ -0.69
DDB1-217ENST00000540166 PRDM10Q9NQV6 1147 aa10.76□□□□□ -0.69
DDB1-217ENST00000540166 R3HDM1Q15032 1099 aaKnown RBP10.76□□□□□ -0.69
DDB1-217ENST00000540166 PRR36Q9H6K5 1346 aa10.76□□□□□ -0.69
DDB1-217ENST00000540166 ANKRD24Q8TF21 1146 aa10.76□□□□□ -0.69
DDB1-217ENST00000540166 CGNL1Q0VF96 1302 aa10.75□□□□□ -0.69
DDB1-217ENST00000540166 CFAP53Q96M91 514 aa10.75□□□□□ -0.69
DDB1-217ENST00000540166 RALGAPBQ86X10 1494 aa10.75□□□□□ -0.69
DDB1-217ENST00000540166 BCAR3O75815 825 aa10.75□□□□□ -0.69
DDB1-217ENST00000540166 AAMPQ13685 434 aa10.75□□□□□ -0.69
DDB1-217ENST00000540166 CLUAP1Q96AJ1 413 aa10.75□□□□□ -0.69
DDB1-217ENST00000540166 KDM5AP29375 1690 aaKnown RBP10.75□□□□□ -0.69
DDB1-217ENST00000540166 UQCRHLA0A096LP55 91 aa10.75□□□□□ -0.69
DDB1-217ENST00000540166 UQCRHP07919 91 aa10.75□□□□□ -0.69
DDB1-217ENST00000540166 TBC1D2Q9BYX2 928 aa10.75□□□□□ -0.69
DDB1-217ENST00000540166 DDX49Q9Y6V7 483 aaKnown RBP10.75□□□□□ -0.69
DDB1-217ENST00000540166 IL2RBP14784 551 aa10.74□□□□□ -0.69
DDB1-217ENST00000540166 POLD1P28340 1107 aa10.74□□□□□ -0.69
DDB1-217ENST00000540166 CSPP1Q1MSJ5 1256 aa10.74□□□□□ -0.69
DDB1-217ENST00000540166 PER1O15534 1290 aaPredicted RBP10.74□□□□□ -0.69
DDB1-217ENST00000540166 MYO5BQ9ULV0 1848 aa10.74□□□□□ -0.69
DDB1-217ENST00000540166 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.74□□□□□ -0.69
DDB1-217ENST00000540166 PARD3Q8TEW0 1356 aa10.74□□□□□ -0.69
DDB1-217ENST00000540166 MYOM2P54296 1465 aa10.73□□□□□ -0.69
DDB1-217ENST00000540166 C1orf141Q5JVX7 400 aa10.73□□□□□ -0.69
DDB1-217ENST00000540166 E9PSI1 815 aa10.73□□□□□ -0.69
DDB1-217ENST00000540166 U2SURPO15042 1029 aaKnown RBP10.73□□□□□ -0.69
DDB1-217ENST00000540166 FGD1P98174 961 aa10.73□□□□□ -0.69
DDB1-217ENST00000540166 BBXQ8WY36 941 aaPredicted RBP10.73□□□□□ -0.69
DDB1-217ENST00000540166 RWDD1Q9H446 243 aaPredicted RBP10.73□□□□□ -0.69
DDB1-217ENST00000540166 RRP7AQ9Y3A4 280 aaKnown RBP10.73□□□□□ -0.69
DDB1-217ENST00000540166 DUSP27Q5VZP5 1158 aa10.73□□□□□ -0.69
DDB1-217ENST00000540166 FTSJ3Q8IY81 847 aaKnown RBP10.73□□□□□ -0.69
DDB1-217ENST00000540166 BCL2L13Q9BXK5 485 aa10.73□□□□□ -0.69
DDB1-217ENST00000540166 C22orf23Q9BZE7 217 aa10.73□□□□□ -0.69
DDB1-217ENST00000540166 FOXD4L1Q9NU39 408 aa10.73□□□□□ -0.69
DDB1-217ENST00000540166 THRAP3Q9Y2W1 955 aaKnown RBP10.73□□□□□ -0.69
DDB1-217ENST00000540166 PANK1Q8TE04 598 aa10.72□□□□□ -0.69
DDB1-217ENST00000540166 TFCP2L1Q9NZI6 479 aa10.71□□□□□ -0.69
DDB1-217ENST00000540166 ZNF330Q9Y3S2 320 aaPredicted RBP10.71□□□□□ -0.69
DDB1-217ENST00000540166 RRS1Q15050 365 aaKnown RBP10.71□□□□□ -0.69
DDB1-217ENST00000540166 SPG7Q9UQ90 795 aa10.71□□□□□ -0.69
DDB1-217ENST00000540166 KDM2BQ8NHM5 1336 aa10.71□□□□□ -0.7
DDB1-217ENST00000540166 FSD2A1L4K1 749 aa10.71□□□□□ -0.7
DDB1-217ENST00000540166 SPON1Q9HCB6 807 aa10.71□□□□□ -0.7
DDB1-217ENST00000540166 CHD2O14647 1828 aaKnown RBP10.7□□□□□ -0.7
DDB1-217ENST00000540166 PRAG1Q86YV5 1406 aa10.7□□□□□ -0.7
DDB1-217ENST00000540166 SLFN5Q08AF3 891 aa10.7□□□□□ -0.7
DDB1-217ENST00000540166 NWD1Q149M9 1564 aa10.7□□□□□ -0.7
DDB1-217ENST00000540166 SMAP1Q8IYB5 467 aaPredicted RBP10.7□□□□□ -0.7
DDB1-217ENST00000540166 SPATA31A5Q5VU36 1347 aa10.7□□□□□ -0.7
DDB1-217ENST00000540166 SPATA31A7Q8IWB4 1347 aa10.7□□□□□ -0.7
DDB1-217ENST00000540166 OFD1O75665 1012 aa10.69□□□□□ -0.7
DDB1-217ENST00000540166 KIAA2012Q0VF49 1180 aa10.69□□□□□ -0.7
DDB1-217ENST00000540166 ZCRB1Q8TBF4 217 aaKnown RBP10.69□□□□□ -0.7
DDB1-217ENST00000540166 TECPR2O15040 1411 aa10.69□□□□□ -0.7
DDB1-217ENST00000540166 MPRIPQ6WCQ1 1025 aa10.69□□□□□ -0.7
DDB1-217ENST00000540166 SEC24BO95487 1268 aa10.68□□□□□ -0.7
DDB1-217ENST00000540166 RBM42Q9BTD8 480 aaKnown RBP10.68□□□□□ -0.7
DDB1-217ENST00000540166 TESK2Q96S53 571 aa10.68□□□□□ -0.7
DDB1-217ENST00000540166 SPATA31A1Q5TZJ5 1347 aa10.68□□□□□ -0.7
DDB1-217ENST00000540166 EZH2Q15910 746 aaKnown RBP10.68□□□□□ -0.7
DDB1-217ENST00000540166 CHAF1AQ13111 956 aaPredicted RBP10.67□□□□□ -0.7
DDB1-217ENST00000540166 GPR162Q16538 588 aa10.67□□□□□ -0.7
DDB1-217ENST00000540166 TBC1D32Q96NH3 1257 aa10.67□□□□□ -0.7
DDB1-217ENST00000540166 CARD10Q9BWT7 1032 aa10.67□□□□□ -0.7
DDB1-217ENST00000540166 USHBP1Q8N6Y0 703 aa10.67□□□□□ -0.7
DDB1-217ENST00000540166 WDR17Q8IZU2 1322 aa10.67□□□□□ -0.7
DDB1-217ENST00000540166 ATF5Q9Y2D1 282 aaPredicted RBP10.66□□□□□ -0.7
DDB1-217ENST00000540166 PLEKHO1Q53GL0 409 aaPredicted RBP10.66□□□□□ -0.7
DDB1-217ENST00000540166 AK7Q96M32 723 aa10.66□□□□□ -0.7
DDB1-217ENST00000540166 BLMP54132 1417 aaPredicted RBP10.66□□□□□ -0.7
DDB1-217ENST00000540166 ZNF771Q7L3S4 317 aaPredicted RBP10.66□□□□□ -0.7
DDB1-217ENST00000540166 LRP6O75581 1613 aa10.66□□□□□ -0.7
DDB1-217ENST00000540166 DYNC1I1O14576 645 aa10.65□□□□□ -0.7
DDB1-217ENST00000540166 IGHDP01880 384 aa10.65□□□□□ -0.7
DDB1-217ENST00000540166 U2AF1L5P0DN76 240 aaPredicted RBP10.65□□□□□ -0.7
DDB1-217ENST00000540166 U2AF1Q01081 240 aaKnown RBP eCLIP10.65□□□□□ -0.71e-7■■□□□ 13.6
DDB1-217ENST00000540166 RTF1Q92541 710 aaKnown RBP10.65□□□□□ -0.7
DDB1-217ENST00000540166 AHDC1Q5TGY3 1603 aaPredicted RBP10.65□□□□□ -0.7
DDB1-217ENST00000540166 TULP4Q9NRJ4 1543 aa10.65□□□□□ -0.7
DDB1-217ENST00000540166 ARHGEF25Q86VW2 580 aa10.65□□□□□ -0.7
DDB1-217ENST00000540166 CDC42BPGQ6DT37 1551 aa10.65□□□□□ -0.7
DDB1-217ENST00000540166 PDE3AQ14432 1141 aa10.65□□□□□ -0.71
DDB1-217ENST00000540166 TMOD3Q9NYL9 352 aa10.65□□□□□ -0.71
DDB1-217ENST00000540166 ERBB4Q15303 1308 aa10.64□□□□□ -0.71
DDB1-217ENST00000540166 BARGINQ6ZT62 677 aa10.64□□□□□ -0.71
DDB1-217ENST00000540166 IP6K1Q92551 441 aa10.64□□□□□ -0.71
DDB1-217ENST00000540166 PDZRN3Q9UPQ7 1066 aa10.64□□□□□ -0.71
DDB1-217ENST00000540166 NRXN1Q9ULB1 1477 aa10.64□□□□□ -0.71
DDB1-217ENST00000540166 STRCP1A6NGW2 1772 aa10.64□□□□□ -0.71
DDB1-217ENST00000540166 TERF1P54274 439 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms