RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 SLAIN2Q9P270 581 aa10.1□□□□□ -0.79
NECAP1-204ENST00000540083 VPS9D1Q9Y2B5 631 aa10.1□□□□□ -0.79
NECAP1-204ENST00000540083 SAFB2Q14151 953 aaKnown RBP eCLIP10.09□□□□□ -0.79
NECAP1-204ENST00000540083 GLIPR1L2Q4G1C9 344 aa10.09□□□□□ -0.79
NECAP1-204ENST00000540083 PUS7Q96PZ0 661 aaKnown RBP10.09□□□□□ -0.79
NECAP1-204ENST00000540083 SALL2Q9Y467 1007 aaPredicted RBP10.09□□□□□ -0.79
NECAP1-204ENST00000540083 SBNO2Q9Y2G9 1366 aa10.09□□□□□ -0.79
NECAP1-204ENST00000540083 PPP1R3GB7ZBB8 358 aa10.08□□□□□ -0.8
NECAP1-204ENST00000540083 WASLO00401 505 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-204ENST00000540083 HRO43593 1189 aa10.08□□□□□ -0.8
NECAP1-204ENST00000540083 EN1Q05925 392 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-204ENST00000540083 ZBED2Q9BTP6 218 aa10.08□□□□□ -0.8
NECAP1-204ENST00000540083 USP47Q96K76 1375 aa10.08□□□□□ -0.8
NECAP1-204ENST00000540083 MINK1Q8N4C8 1332 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-204ENST00000540083 CDC42BPGQ6DT37 1551 aa10.07□□□□□ -0.8
NECAP1-204ENST00000540083 COL9A1P20849 921 aa10.07□□□□□ -0.8
NECAP1-204ENST00000540083 TMF1P82094 1093 aa10.07□□□□□ -0.8
NECAP1-204ENST00000540083 ARHGEF28Q8N1W1 1705 aaKnown RBP10.07□□□□□ -0.8
NECAP1-204ENST00000540083 ANKARQ7Z5J8 1434 aa10.07□□□□□ -0.8
NECAP1-204ENST00000540083 OSBPP22059 807 aa10.06□□□□□ -0.8
NECAP1-204ENST00000540083 SRPK2P78362 688 aaKnown RBP10.06□□□□□ -0.8
NECAP1-204ENST00000540083 RNF166Q96A37 237 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-204ENST00000540083 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-204ENST00000540083 ADGRB2O60241 1585 aa10.05□□□□□ -0.8
NECAP1-204ENST00000540083 ATAD2Q6PL18 1390 aa10.05□□□□□ -0.8
NECAP1-204ENST00000540083 PLEKHH1Q9ULM0 1364 aa10.05□□□□□ -0.8
NECAP1-204ENST00000540083 ST20-MTHFSA0A0A6YYL1 179 aa10.05□□□□□ -0.8
NECAP1-204ENST00000540083 MAP3K7O43318 606 aa10.05□□□□□ -0.8
NECAP1-204ENST00000540083 CDK19Q9BWU1 502 aa10.05□□□□□ -0.8
NECAP1-204ENST00000540083 USP35Q9P2H5 1018 aa10.05□□□□□ -0.8
NECAP1-204ENST00000540083 XIRP1Q702N8 1843 aaKnown RBP10.05□□□□□ -0.8
NECAP1-204ENST00000540083 PRIM1P49642 420 aaKnown RBP10.04□□□□□ -0.8
NECAP1-204ENST00000540083 PIP4K2BP78356 416 aa10.04□□□□□ -0.8
NECAP1-204ENST00000540083 ESCO1Q5FWF5 840 aa10.04□□□□□ -0.8
NECAP1-204ENST00000540083 HIRIP3Q9BW71 556 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-204ENST00000540083 NALCNQ8IZF0 1738 aa10.04□□□□□ -0.8
NECAP1-204ENST00000540083 CCER2I3L3R5 266 aa10.03□□□□□ -0.8
NECAP1-204ENST00000540083 MST1RQ04912 1400 aa10.03□□□□□ -0.8
NECAP1-204ENST00000540083 PSME1Q06323 249 aa10.03□□□□□ -0.8
NECAP1-204ENST00000540083 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
NECAP1-204ENST00000540083 RTL5Q5HYW3 569 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-204ENST00000540083 NUDT16Q96DE0 195 aaKnown RBP10.03□□□□□ -0.8
NECAP1-204ENST00000540083 C1orf167Q5SNV9 1468 aa10.03□□□□□ -0.8
NECAP1-204ENST00000540083 NPHP3Q7Z494 1330 aa10.03□□□□□ -0.8
NECAP1-204ENST00000540083 QRICH2Q9H0J4 1663 aa10.02□□□□□ -0.8
NECAP1-204ENST00000540083 NINLQ9Y2I6 1382 aa10.02□□□□□ -0.8
NECAP1-204ENST00000540083 BHMG1C9JSJ3 638 aaPredicted RBP10.02□□□□□ -0.81
NECAP1-204ENST00000540083 MLLT3P42568 568 aaPredicted RBP10.02□□□□□ -0.81
NECAP1-204ENST00000540083 NOP58Q9Y2X3 529 aaKnown RBP10.02□□□□□ -0.81
NECAP1-204ENST00000540083 TULP4Q9NRJ4 1543 aa10.02□□□□□ -0.81
NECAP1-204ENST00000540083 HSPA5P11021 654 aaKnown RBP10.01□□□□□ -0.81
NECAP1-204ENST00000540083 PROX2Q3B8N5 592 aa10.01□□□□□ -0.81
NECAP1-204ENST00000540083 NGDNQ8NEJ9 315 aaKnown RBP10.01□□□□□ -0.81
NECAP1-204ENST00000540083 RSPH6AQ9H0K4 717 aa10.01□□□□□ -0.81
NECAP1-204ENST00000540083 FMN2Q9NZ56 1722 aa10.01□□□□□ -0.81
NECAP1-204ENST00000540083 BRD4O60885 1362 aaPredicted RBP10.01□□□□□ -0.81
NECAP1-204ENST00000540083 PLEKHG3A1L390 1219 aa10□□□□□ -0.81
NECAP1-204ENST00000540083 BRINP3Q76B58 766 aa10□□□□□ -0.81
NECAP1-204ENST00000540083 LRRC59Q96AG4 307 aaKnown RBP10□□□□□ -0.81
NECAP1-204ENST00000540083 TESK2Q96S53 571 aa10□□□□□ -0.81
NECAP1-204ENST00000540083 TERF2IPQ9NYB0 399 aa10□□□□□ -0.81
NECAP1-204ENST00000540083 KIF1AQ12756 1690 aa9.99□□□□□ -0.81
NECAP1-204ENST00000540083 ITSN1Q15811 1721 aa9.99□□□□□ -0.81
NECAP1-204ENST00000540083 NUTM2FA1L443 756 aa9.99□□□□□ -0.81
NECAP1-204ENST00000540083 SEMA3EO15041 775 aa9.99□□□□□ -0.81
NECAP1-204ENST00000540083 ONECUT3O60422 494 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-204ENST00000540083 HDGFL2Q7Z4V5 671 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-204ENST00000540083 RABGEF1Q9UJ41 708 aa9.99□□□□□ -0.81
NECAP1-204ENST00000540083 WASHC2AQ641Q2 1341 aa9.99□□□□□ -0.81
NECAP1-204ENST00000540083 ORAI2Q96SN7 254 aa9.98□□□□□ -0.81
NECAP1-204ENST00000540083 FOXO3O43524 673 aa9.97□□□□□ -0.81
NECAP1-204ENST00000540083 TMC1Q8TDI8 760 aa9.97□□□□□ -0.81
NECAP1-204ENST00000540083 NBPF3Q9H094 633 aa9.97□□□□□ -0.81
NECAP1-204ENST00000540083 PPIP5K1Q6PFW1 1433 aa9.97□□□□□ -0.81
NECAP1-204ENST00000540083 ROBO1Q9Y6N7 1651 aa9.96□□□□□ -0.81
NECAP1-204ENST00000540083 TRIM6-TRIM34B2RNG4 842 aa9.96□□□□□ -0.82
NECAP1-204ENST00000540083 KRT28Q7Z3Y7 464 aa9.96□□□□□ -0.82
NECAP1-204ENST00000540083 MRPL50Q8N5N7 158 aaKnown RBP9.96□□□□□ -0.82
NECAP1-204ENST00000540083 CABP1Q9NZU7 370 aa9.96□□□□□ -0.82
NECAP1-204ENST00000540083 KIAA1468Q9P260 1216 aa9.96□□□□□ -0.82
NECAP1-204ENST00000540083 ATP7BP35670 1465 aa9.96□□□□□ -0.82
NECAP1-204ENST00000540083 PMFBP1Q8TBY8 1022 aa9.95□□□□□ -0.82
NECAP1-204ENST00000540083 ACEP12821 1306 aa9.95□□□□□ -0.82
NECAP1-204ENST00000540083 SOS2Q07890 1332 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-204ENST00000540083 PRR36Q9H6K5 1346 aa9.95□□□□□ -0.82
NECAP1-204ENST00000540083 SBNO1A3KN83 1393 aa9.95□□□□□ -0.82
NECAP1-204ENST00000540083 POLR3AO14802 1390 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-204ENST00000540083 AHDC1Q5TGY3 1603 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-204ENST00000540083 ARHGEF10O15013 1369 aa9.94□□□□□ -0.82
NECAP1-204ENST00000540083 CCDC136Q96JN2 1154 aa9.94□□□□□ -0.82
NECAP1-204ENST00000540083 CDHR5Q9HBB8 845 aa9.94□□□□□ -0.82
NECAP1-204ENST00000540083 JCADQ9P266 1359 aa9.93□□□□□ -0.82
NECAP1-204ENST00000540083 TTC21AQ8NDW8 1320 aa9.93□□□□□ -0.82
NECAP1-204ENST00000540083 TESPA1A2RU30 521 aaPredicted RBP9.93□□□□□ -0.82
NECAP1-204ENST00000540083 HSPA1LP34931 641 aa9.93□□□□□ -0.82
NECAP1-204ENST00000540083 PRSS12P56730 875 aa9.93□□□□□ -0.82
NECAP1-204ENST00000540083 CDCA7LQ96GN5 454 aa9.93□□□□□ -0.82
NECAP1-204ENST00000540083 POLR3GLQ9BT43 218 aa9.93□□□□□ -0.82
NECAP1-204ENST00000540083 NPDC1Q9NQX5 325 aaPredicted RBP9.93□□□□□ -0.82
NECAP1-204ENST00000540083 PHLPP1O60346 1717 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms