RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 MAP3K19Q56UN5 1328 aa10.1□□□□□ -0.79
LDHB-208ENST00000539782 PNPLA7Q6ZV29 1317 aa10.1□□□□□ -0.79
LDHB-208ENST00000539782 SLC24A1O60721 1099 aa10.1□□□□□ -0.79
LDHB-208ENST00000539782 GIGYF1O75420 1035 aaPredicted RBP10.1□□□□□ -0.79
LDHB-208ENST00000539782 C1QTNF8P60827 252 aa10.1□□□□□ -0.79
LDHB-208ENST00000539782 RTL1A6NKG5 1358 aa10.1□□□□□ -0.79
LDHB-208ENST00000539782 USP47Q96K76 1375 aa10.1□□□□□ -0.79
LDHB-208ENST00000539782 QSER1Q2KHR3 1735 aa10.1□□□□□ -0.79
LDHB-208ENST00000539782 CHD4Q14839 1912 aa10.09□□□□□ -0.79
LDHB-208ENST00000539782 KCNQ4P56696 695 aa10.09□□□□□ -0.79
LDHB-208ENST00000539782 RAPGEF4Q8WZA2 1011 aa10.09□□□□□ -0.79
LDHB-208ENST00000539782 KAT6BQ8WYB5 2073 aa10.09□□□□□ -0.79
LDHB-208ENST00000539782 MEGF6O75095 1541 aa10.08□□□□□ -0.8
LDHB-208ENST00000539782 TATP17735 454 aaPredicted RBP10.08□□□□□ -0.8
LDHB-208ENST00000539782 HMGB2P26583 209 aaKnown RBP10.08□□□□□ -0.8
LDHB-208ENST00000539782 CGNL1Q0VF96 1302 aa10.07□□□□□ -0.8
LDHB-208ENST00000539782 ST20-MTHFSA0A0A6YYL1 179 aa10.07□□□□□ -0.8
LDHB-208ENST00000539782 GRIN3BO60391 1043 aa10.07□□□□□ -0.8
LDHB-208ENST00000539782 USHBP1Q8N6Y0 703 aa10.07□□□□□ -0.8
LDHB-208ENST00000539782 NLGN2Q8NFZ4 835 aa10.07□□□□□ -0.8
LDHB-208ENST00000539782 NSD2O96028 1365 aa10.06□□□□□ -0.8
LDHB-208ENST00000539782 RRS1Q15050 365 aaKnown RBP10.06□□□□□ -0.8
LDHB-208ENST00000539782 GGNBP2Q9H3C7 697 aa10.06□□□□□ -0.8
LDHB-208ENST00000539782 LY75O60449 1722 aa10.06□□□□□ -0.8
LDHB-208ENST00000539782 PCDH11XQ9BZA7 1347 aa10.06□□□□□ -0.8
LDHB-208ENST00000539782 PCDH11YQ9BZA8 1340 aa10.06□□□□□ -0.8
LDHB-208ENST00000539782 TUBGCP6Q96RT7 1819 aa10.05□□□□□ -0.8
LDHB-208ENST00000539782 FBLN1P23142 703 aa10.05□□□□□ -0.8
LDHB-208ENST00000539782 TMF1P82094 1093 aa10.05□□□□□ -0.8
LDHB-208ENST00000539782 NBPF6Q5VWK0 638 aa10.05□□□□□ -0.8
LDHB-208ENST00000539782 MSL1Q68DK7 614 aa10.05□□□□□ -0.8
LDHB-208ENST00000539782 FLAD1Q8NFF5 587 aa10.05□□□□□ -0.8
LDHB-208ENST00000539782 NBPF4Q96M43 638 aa10.05□□□□□ -0.8
LDHB-208ENST00000539782 TESK2Q96S53 571 aa10.05□□□□□ -0.8
LDHB-208ENST00000539782 COL23A1Q86Y22 540 aaPredicted RBP10.04□□□□□ -0.8
LDHB-208ENST00000539782 COL24A1Q17RW2 1714 aa10.04□□□□□ -0.8
LDHB-208ENST00000539782 SHANK3Q9BYB0 1731 aa10.04□□□□□ -0.8
LDHB-208ENST00000539782 RGPD2P0DJD1 1756 aa10.03□□□□□ -0.8
LDHB-208ENST00000539782 FLT4P35916 1363 aa10.03□□□□□ -0.8
LDHB-208ENST00000539782 PALLDQ8WX93 1383 aa10.03□□□□□ -0.8
LDHB-208ENST00000539782 ADRA2BP18089 450 aa10.03□□□□□ -0.8
LDHB-208ENST00000539782 CDCA8Q53HL2 280 aa10.03□□□□□ -0.8
LDHB-208ENST00000539782 MPRIPQ6WCQ1 1025 aa10.03□□□□□ -0.8
LDHB-208ENST00000539782 SMARCC1Q92922 1105 aaPredicted RBP10.03□□□□□ -0.8
LDHB-208ENST00000539782 AK7Q96M32 723 aa10.03□□□□□ -0.8
LDHB-208ENST00000539782 C5P01031 1676 aa10.02□□□□□ -0.8
LDHB-208ENST00000539782 INSRP06213 1382 aa10.02□□□□□ -0.8
LDHB-208ENST00000539782 FYB1O15117 783 aa10.02□□□□□ -0.81
LDHB-208ENST00000539782 YBX3P16989 372 aaKnown RBP eCLIP10.02□□□□□ -0.817e-24■□□□□ 8.2
LDHB-208ENST00000539782 PIAS4Q8N2W9 510 aaPredicted RBP10.02□□□□□ -0.81
LDHB-208ENST00000539782 NSD3Q9BZ95 1437 aa10.01□□□□□ -0.81
LDHB-208ENST00000539782 KIF20BQ96Q89 1820 aa10.01□□□□□ -0.81
LDHB-208ENST00000539782 HSP90AB2PQ58FF8 381 aa10.01□□□□□ -0.81
LDHB-208ENST00000539782 CD2APQ9Y5K6 639 aa10.01□□□□□ -0.81
LDHB-208ENST00000539782 KIF24Q5T7B8 1368 aa10.01□□□□□ -0.81
LDHB-208ENST00000539782 ATP10DQ9P241 1426 aa10□□□□□ -0.81
LDHB-208ENST00000539782 PPM1GO15355 546 aaPredicted RBP10□□□□□ -0.81
LDHB-208ENST00000539782 PHF14O94880 888 aa10□□□□□ -0.81
LDHB-208ENST00000539782 UTRNP46939 3433 aa9.99□□□□□ -0.81
LDHB-208ENST00000539782 GPBP1L1Q9HC44 474 aaPredicted RBP9.99□□□□□ -0.81
LDHB-208ENST00000539782 SPG7Q9UQ90 795 aa9.99□□□□□ -0.81
LDHB-208ENST00000539782 C4BP0C0L5 1744 aa9.99□□□□□ -0.81
LDHB-208ENST00000539782 CYP27B1O15528 508 aa9.98□□□□□ -0.81
LDHB-208ENST00000539782 ZNF526Q8TF50 670 aaPredicted RBP9.98□□□□□ -0.81
LDHB-208ENST00000539782 EMILIN1Q9Y6C2 1016 aa9.98□□□□□ -0.81
LDHB-208ENST00000539782 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.97□□□□□ -0.81
LDHB-208ENST00000539782 TMOD3Q9NYL9 352 aa9.97□□□□□ -0.81
LDHB-208ENST00000539782 WWC3Q9ULE0 1092 aa9.97□□□□□ -0.81
LDHB-208ENST00000539782 IGSF1Q8N6C5 1336 aa9.97□□□□□ -0.81
LDHB-208ENST00000539782 SSFA2P28290 1259 aa9.96□□□□□ -0.82
LDHB-208ENST00000539782 PIGBQ92521 554 aa9.96□□□□□ -0.82
LDHB-208ENST00000539782 PKD1L3Q7Z443 1732 aa9.96□□□□□ -0.82
LDHB-208ENST00000539782 TOGARAM1Q9Y4F4 1720 aa9.96□□□□□ -0.82
LDHB-208ENST00000539782 TAF1LQ8IZX4 1826 aa9.96□□□□□ -0.82
LDHB-208ENST00000539782 LOC102724428A0A0B4J2F2 783 aa9.95□□□□□ -0.82
LDHB-208ENST00000539782 GNPATO15228 680 aa9.95□□□□□ -0.82
LDHB-208ENST00000539782 SIK1P57059 783 aa9.95□□□□□ -0.82
LDHB-208ENST00000539782 POLR3GLQ9BT43 218 aa9.95□□□□□ -0.82
LDHB-208ENST00000539782 ITGB4P16144 1822 aa9.94□□□□□ -0.82
LDHB-208ENST00000539782 ATP6V1AP38606 617 aa9.94□□□□□ -0.82
LDHB-208ENST00000539782 NKX1-1Q15270 411 aaPredicted RBP9.94□□□□□ -0.82
LDHB-208ENST00000539782 IFNL2Q8IZJ0 200 aa9.94□□□□□ -0.82
LDHB-208ENST00000539782 LINC00116Q8NCU8 138 aa9.94□□□□□ -0.82
LDHB-208ENST00000539782 ADCY9O60503 1353 aa9.93□□□□□ -0.82
LDHB-208ENST00000539782 WASHC2AQ641Q2 1341 aa9.93□□□□□ -0.82
LDHB-208ENST00000539782 SMIM5Q71RC9 77 aa9.93□□□□□ -0.82
LDHB-208ENST00000539782 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.93□□□□□ -0.82
LDHB-208ENST00000539782 NCAPD2Q15021 1401 aa9.92□□□□□ -0.82
LDHB-208ENST00000539782 UBR3Q6ZT12 1888 aa9.92□□□□□ -0.82
LDHB-208ENST00000539782 PHKG2P15735 406 aa9.92□□□□□ -0.82
LDHB-208ENST00000539782 HSPA6P17066 643 aa9.92□□□□□ -0.82
LDHB-208ENST00000539782 IFFO2Q5TF58 517 aa9.92□□□□□ -0.82
LDHB-208ENST00000539782 AMIGO3Q86WK7 504 aa9.92□□□□□ -0.82
LDHB-208ENST00000539782 EYA1Q99502 592 aa9.92□□□□□ -0.82
LDHB-208ENST00000539782 CARD14Q9BXL6 1004 aa9.92□□□□□ -0.82
LDHB-208ENST00000539782 ASAP1Q9ULH1 1129 aa9.92□□□□□ -0.82
LDHB-208ENST00000539782 ANKRD26Q9UPS8 1709 aa9.91□□□□□ -0.82
LDHB-208ENST00000539782 MMP10P09238 476 aa9.91□□□□□ -0.82
LDHB-208ENST00000539782 TNNT2P45379 298 aaPredicted RBP9.91□□□□□ -0.82
LDHB-208ENST00000539782 TRAPPC3LQ5T215 181 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms