RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
TSPAN9-207ENST00000539631 UPF1Q92900 1129 aaKnown RBP eCLIP17.07■□□□□ 0.32
TSPAN9-207ENST00000539631 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
TSPAN9-207ENST00000539631 ANP32CO43423 234 aa17.06■□□□□ 0.32
TSPAN9-207ENST00000539631 HMOX1P09601 288 aa17.06■□□□□ 0.32
TSPAN9-207ENST00000539631 MARCH10Q8NA82 808 aaPredicted RBP17.06■□□□□ 0.32
TSPAN9-207ENST00000539631 ZCRB1Q8TBF4 217 aaKnown RBP17.06■□□□□ 0.32
TSPAN9-207ENST00000539631 KDRP35968 1356 aa17.05■□□□□ 0.32
TSPAN9-207ENST00000539631 DDX54Q8TDD1 881 aaKnown RBP17.04■□□□□ 0.32
TSPAN9-207ENST00000539631 NUDCQ9Y266 331 aa17.04■□□□□ 0.32
TSPAN9-207ENST00000539631 FAM196AQ6ZSG2 479 aa17.02■□□□□ 0.32
TSPAN9-207ENST00000539631 U2AF1L5P0DN76 240 aaPredicted RBP17.01■□□□□ 0.31
TSPAN9-207ENST00000539631 U2AF1Q01081 240 aaKnown RBP eCLIP17.01■□□□□ 0.31
TSPAN9-207ENST00000539631 SPG7Q9UQ90 795 aa17.01■□□□□ 0.31
TSPAN9-207ENST00000539631 PCDH11XQ9BZA7 1347 aa17■□□□□ 0.31
TSPAN9-207ENST00000539631 PCDH11YQ9BZA8 1340 aa17■□□□□ 0.31
TSPAN9-207ENST00000539631 DOT1LQ8TEK3 1739 aa17■□□□□ 0.31
TSPAN9-207ENST00000539631 TNS1Q9HBL0 1735 aaKnown RBP17■□□□□ 0.31
TSPAN9-207ENST00000539631 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
TSPAN9-207ENST00000539631 PLEKHG2Q9H7P9 1386 aa17■□□□□ 0.31
TSPAN9-207ENST00000539631 EP400Q96L91 3159 aa16.99■□□□□ 0.31
TSPAN9-207ENST00000539631 CYP27B1O15528 508 aa16.99■□□□□ 0.31
TSPAN9-207ENST00000539631 CCDC184Q52MB2 194 aa16.99■□□□□ 0.31
TSPAN9-207ENST00000539631 PLEKHO1Q53GL0 409 aaPredicted RBP16.99■□□□□ 0.31
TSPAN9-207ENST00000539631 RSPH6AQ9H0K4 717 aa16.99■□□□□ 0.31
TSPAN9-207ENST00000539631 VIRMAQ69YN4 1812 aaKnown RBP16.98■□□□□ 0.31
TSPAN9-207ENST00000539631 NHSQ6T4R5 1651 aa16.98■□□□□ 0.31
TSPAN9-207ENST00000539631 BCL9O00512 1426 aa16.98■□□□□ 0.31
TSPAN9-207ENST00000539631 AMOTQ4VCS5 1084 aa16.98■□□□□ 0.31
TSPAN9-207ENST00000539631 TOGARAM1Q9Y4F4 1720 aa16.98■□□□□ 0.31
TSPAN9-207ENST00000539631 TRIM37O94972 964 aa16.97■□□□□ 0.31
TSPAN9-207ENST00000539631 KAT6BQ8WYB5 2073 aa16.97■□□□□ 0.31
TSPAN9-207ENST00000539631 PHKG2P15735 406 aa16.96■□□□□ 0.31
TSPAN9-207ENST00000539631 PRKAR2BP31323 418 aa16.96■□□□□ 0.31
TSPAN9-207ENST00000539631 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
TSPAN9-207ENST00000539631 IFNL2Q8IZJ0 200 aa16.96■□□□□ 0.31
TSPAN9-207ENST00000539631 ACSBG1Q96GR2 724 aa16.96■□□□□ 0.31
TSPAN9-207ENST00000539631 ITGB4P16144 1822 aa16.96■□□□□ 0.3
TSPAN9-207ENST00000539631 FCHSD2O94868 740 aa16.95■□□□□ 0.3
TSPAN9-207ENST00000539631 MTHFSDQ2M296 383 aaKnown RBP16.95■□□□□ 0.3
TSPAN9-207ENST00000539631 DIEXFQ68CQ4 756 aaKnown RBP16.94■□□□□ 0.3
TSPAN9-207ENST00000539631 PTF1AQ7RTS3 328 aa16.94■□□□□ 0.3
TSPAN9-207ENST00000539631 PHACTR3Q96KR7 559 aa16.94■□□□□ 0.3
TSPAN9-207ENST00000539631 BTAF1O14981 1849 aa16.93■□□□□ 0.3
TSPAN9-207ENST00000539631 SCN11AQ9UI33 1791 aa16.93■□□□□ 0.3
TSPAN9-207ENST00000539631 KCNQ2O43526 872 aa16.93■□□□□ 0.3
TSPAN9-207ENST00000539631 WDR43Q15061 677 aaKnown RBP eCLIP16.93■□□□□ 0.3
TSPAN9-207ENST00000539631 NKX1-1Q15270 411 aaPredicted RBP16.93■□□□□ 0.3
TSPAN9-207ENST00000539631 CCDC125Q86Z20 511 aa16.93■□□□□ 0.3
TSPAN9-207ENST00000539631 DLG5Q8TDM6 1919 aa16.92■□□□□ 0.3
TSPAN9-207ENST00000539631 SF3B2Q13435 895 aaKnown RBP16.92■□□□□ 0.3
TSPAN9-207ENST00000539631 C1orf141Q5JVX7 400 aa16.92■□□□□ 0.3
TSPAN9-207ENST00000539631 MRS2Q9HD23 443 aa16.92■□□□□ 0.3
TSPAN9-207ENST00000539631 PLEKHF1Q96S99 279 aa16.91■□□□□ 0.3
TSPAN9-207ENST00000539631 BCL11BQ9C0K0 894 aaPredicted RBP16.91■□□□□ 0.3
TSPAN9-207ENST00000539631 KDM6AO15550 1401 aaPredicted RBP16.9■□□□□ 0.3
TSPAN9-207ENST00000539631 PRIM1P49642 420 aaKnown RBP16.9■□□□□ 0.3
TSPAN9-207ENST00000539631 AKAP4Q5JQC9 854 aa16.9■□□□□ 0.3
TSPAN9-207ENST00000539631 GAS2L2Q8NHY3 880 aa16.9■□□□□ 0.3
TSPAN9-207ENST00000539631 SYTL4Q96C24 671 aaPredicted RBP16.9■□□□□ 0.3
TSPAN9-207ENST00000539631 ADAMTS8Q9UP79 889 aa16.9■□□□□ 0.3
TSPAN9-207ENST00000539631 ADAMTS7Q9UKP4 1686 aa16.89■□□□□ 0.29
TSPAN9-207ENST00000539631 APBA3O96018 575 aa16.89■□□□□ 0.29
TSPAN9-207ENST00000539631 DEFB132Q7Z7B7 95 aa16.89■□□□□ 0.29
TSPAN9-207ENST00000539631 PNNQ9H307 717 aaKnown RBP16.89■□□□□ 0.29
TSPAN9-207ENST00000539631 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
TSPAN9-207ENST00000539631 MPRIPQ6WCQ1 1025 aa16.88■□□□□ 0.29
TSPAN9-207ENST00000539631 CCDC146Q8IYE0 955 aa16.88■□□□□ 0.29
TSPAN9-207ENST00000539631 NEFMP07197 916 aa16.87■□□□□ 0.29
TSPAN9-207ENST00000539631 BAG6P46379 1132 aa16.87■□□□□ 0.29
TSPAN9-207ENST00000539631 DCAF5Q96JK2 942 aa16.87■□□□□ 0.29
TSPAN9-207ENST00000539631 MAP3K5Q99683 1374 aa16.87■□□□□ 0.29
TSPAN9-207ENST00000539631 RGPD3A6NKT7 1758 aaPredicted RBP16.87■□□□□ 0.29
TSPAN9-207ENST00000539631 RGPD4Q7Z3J3 1758 aa16.87■□□□□ 0.29
TSPAN9-207ENST00000539631 EN1Q05925 392 aaPredicted RBP16.86■□□□□ 0.29
TSPAN9-207ENST00000539631 PNISRQ8TF01 805 aaKnown RBP16.86■□□□□ 0.29
TSPAN9-207ENST00000539631 LGR6Q9HBX8 967 aa16.86■□□□□ 0.29
TSPAN9-207ENST00000539631 MAPK8IP3Q9UPT6 1336 aa16.86■□□□□ 0.29
TSPAN9-207ENST00000539631 GNAT3A8MTJ3 354 aa16.85■□□□□ 0.29
TSPAN9-207ENST00000539631 RNMTO43148 476 aaKnown RBP16.85■□□□□ 0.29
TSPAN9-207ENST00000539631 RREB1Q92766 1687 aa16.85■□□□□ 0.29
TSPAN9-207ENST00000539631 ERVV-2B6SEH9 535 aa16.84■□□□□ 0.29
TSPAN9-207ENST00000539631 EZH2Q15910 746 aaKnown RBP16.84■□□□□ 0.29
TSPAN9-207ENST00000539631 RUNDC1Q96C34 613 aa16.84■□□□□ 0.29
TSPAN9-207ENST00000539631 LY75O60449 1722 aa16.84■□□□□ 0.29
TSPAN9-207ENST00000539631 SIPA1L3O60292 1781 aaPredicted RBP16.84■□□□□ 0.29
TSPAN9-207ENST00000539631 NFE2L2Q16236 605 aa16.83■□□□□ 0.28
TSPAN9-207ENST00000539631 MIER1Q8N108 512 aa16.83■□□□□ 0.28
TSPAN9-207ENST00000539631 PIGBQ92521 554 aa16.83■□□□□ 0.28
TSPAN9-207ENST00000539631 CAMKK2Q96RR4 588 aa16.83■□□□□ 0.28
TSPAN9-207ENST00000539631 TMOD3Q9NYL9 352 aa16.83■□□□□ 0.28
TSPAN9-207ENST00000539631 MRC1P22897 1456 aa16.82■□□□□ 0.28
TSPAN9-207ENST00000539631 PLSCR1O15162 318 aa16.82■□□□□ 0.28
TSPAN9-207ENST00000539631 CABP4P57796 275 aa16.82■□□□□ 0.28
TSPAN9-207ENST00000539631 IL17REQ8NFR9 667 aa16.82■□□□□ 0.28
TSPAN9-207ENST00000539631 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
TSPAN9-207ENST00000539631 CCER2I3L3R5 266 aa16.8■□□□□ 0.28
TSPAN9-207ENST00000539631 TMPOP42166 694 aaKnown RBP16.8■□□□□ 0.28
TSPAN9-207ENST00000539631 DCTN1Q14203 1278 aa16.8■□□□□ 0.28
TSPAN9-207ENST00000539631 FAM9BQ8IZU0 186 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 226.4 ms