RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 RAPGEF4Q8WZA2 1011 aa26.29■■□□□ 1.8
TNFRSF1A-212ENST00000539372 BTAF1O14981 1849 aa26.29■■□□□ 1.8
TNFRSF1A-212ENST00000539372 KAT6BQ8WYB5 2073 aa26.29■■□□□ 1.8
TNFRSF1A-212ENST00000539372 TNNT2P45379 298 aaPredicted RBP26.28■■□□□ 1.8
TNFRSF1A-212ENST00000539372 SYTL4Q96C24 671 aaPredicted RBP26.27■■□□□ 1.8
TNFRSF1A-212ENST00000539372 STK32BQ9NY57 414 aa26.27■■□□□ 1.8
TNFRSF1A-212ENST00000539372 SHANK3Q9BYB0 1731 aa26.27■■□□□ 1.8
TNFRSF1A-212ENST00000539372 TATP17735 454 aaPredicted RBP26.26■■□□□ 1.79
TNFRSF1A-212ENST00000539372 PRIM1P49642 420 aaKnown RBP26.26■■□□□ 1.79
TNFRSF1A-212ENST00000539372 PDGFDQ9GZP0 370 aaPredicted RBP26.26■■□□□ 1.79
TNFRSF1A-212ENST00000539372 POLKQ9UBT6 870 aa26.25■■□□□ 1.79
TNFRSF1A-212ENST00000539372 SPON1Q9HCB6 807 aa26.24■■□□□ 1.79
TNFRSF1A-212ENST00000539372 ANKRD26Q9UPS8 1709 aa26.23■■□□□ 1.79
TNFRSF1A-212ENST00000539372 WASHC2AQ641Q2 1341 aa26.23■■□□□ 1.79
TNFRSF1A-212ENST00000539372 SLC15A2Q16348 729 aa26.23■■□□□ 1.79
TNFRSF1A-212ENST00000539372 DOT1LQ8TEK3 1739 aa26.22■■□□□ 1.79
TNFRSF1A-212ENST00000539372 MAP2P11137 1827 aaKnown RBP26.22■■□□□ 1.79
TNFRSF1A-212ENST00000539372 CASZ1Q86V15 1759 aa26.2■■□□□ 1.79
TNFRSF1A-212ENST00000539372 LRRC4BQ9NT99 713 aa26.2■■□□□ 1.78
TNFRSF1A-212ENST00000539372 NSD2O96028 1365 aa26.2■■□□□ 1.78
TNFRSF1A-212ENST00000539372 ZBTB7AO95365 584 aa26.19■■□□□ 1.78
TNFRSF1A-212ENST00000539372 PCDH11XQ9BZA7 1347 aa26.18■■□□□ 1.78
TNFRSF1A-212ENST00000539372 PCDH11YQ9BZA8 1340 aa26.18■■□□□ 1.78
TNFRSF1A-212ENST00000539372 EYA1Q99502 592 aa26.18■■□□□ 1.78
TNFRSF1A-212ENST00000539372 PPP1R1BQ9UD71 204 aaPredicted RBP26.18■■□□□ 1.78
TNFRSF1A-212ENST00000539372 PAPPAQ13219 1627 aa26.17■■□□□ 1.78
TNFRSF1A-212ENST00000539372 KCNQ4P56696 695 aa26.16■■□□□ 1.78
TNFRSF1A-212ENST00000539372 KIF7Q2M1P5 1343 aa26.15■■□□□ 1.78
TNFRSF1A-212ENST00000539372 NCAPD2Q15021 1401 aa26.15■■□□□ 1.78
TNFRSF1A-212ENST00000539372 ZNF827Q17R98 1081 aa26.15■■□□□ 1.78
TNFRSF1A-212ENST00000539372 CYP27B1O15528 508 aa26.14■■□□□ 1.78
TNFRSF1A-212ENST00000539372 EIF4A2Q14240 407 aaKnown RBP26.14■■□□□ 1.78
TNFRSF1A-212ENST00000539372 SLC27A3Q5K4L6 730 aa26.14■■□□□ 1.78
TNFRSF1A-212ENST00000539372 ATF5Q9Y2D1 282 aaPredicted RBP26.14■■□□□ 1.78
TNFRSF1A-212ENST00000539372 KNSTRNQ9Y448 316 aa26.14■■□□□ 1.78
TNFRSF1A-212ENST00000539372 MORC1Q86VD1 984 aa26.13■■□□□ 1.77
TNFRSF1A-212ENST00000539372 SPG7Q9UQ90 795 aa26.1■■□□□ 1.77
TNFRSF1A-212ENST00000539372 PKD1L3Q7Z443 1732 aa26.1■■□□□ 1.77
TNFRSF1A-212ENST00000539372 AKT1S1Q96B36 256 aa26.09■■□□□ 1.77
TNFRSF1A-212ENST00000539372 PTGER2P43116 358 aa26.08■■□□□ 1.77
TNFRSF1A-212ENST00000539372 MPRIPQ6WCQ1 1025 aa26.08■■□□□ 1.77
TNFRSF1A-212ENST00000539372 CCNL1Q9UK58 526 aaPredicted RBP26.08■■□□□ 1.77
TNFRSF1A-212ENST00000539372 MTFR1LQ9H019 292 aa26.07■■□□□ 1.76
TNFRSF1A-212ENST00000539372 LY75O60449 1722 aa26.07■■□□□ 1.76
TNFRSF1A-212ENST00000539372 AMER1Q5JTC6 1135 aaPredicted RBP26.05■■□□□ 1.76
TNFRSF1A-212ENST00000539372 TOGARAM1Q9Y4F4 1720 aa26.05■■□□□ 1.76
TNFRSF1A-212ENST00000539372 TFCP2L1Q9NZI6 479 aa26.04■■□□□ 1.76
TNFRSF1A-212ENST00000539372 NKX1-1Q15270 411 aaPredicted RBP26.03■■□□□ 1.76
TNFRSF1A-212ENST00000539372 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.03■■□□□ 1.76
TNFRSF1A-212ENST00000539372 IGSF1Q8N6C5 1336 aa26.03■■□□□ 1.76
TNFRSF1A-212ENST00000539372 PNPLA7Q6ZV29 1317 aa26.01■■□□□ 1.75
TNFRSF1A-212ENST00000539372 PALLDQ8WX93 1383 aa26.01■■□□□ 1.75
TNFRSF1A-212ENST00000539372 PHKG2P15735 406 aa26■■□□□ 1.75
TNFRSF1A-212ENST00000539372 IFNL2Q8IZJ0 200 aa26■■□□□ 1.75
TNFRSF1A-212ENST00000539372 PIGBQ92521 554 aa26■■□□□ 1.75
TNFRSF1A-212ENST00000539372 SGIP1Q9BQI5 828 aa25.99■■□□□ 1.75
TNFRSF1A-212ENST00000539372 ITGB4P16144 1822 aa25.99■■□□□ 1.75
TNFRSF1A-212ENST00000539372 PER1O15534 1290 aaPredicted RBP25.97■■□□□ 1.75
TNFRSF1A-212ENST00000539372 CC2D1BQ5T0F9 858 aaKnown RBP25.97■■□□□ 1.75
TNFRSF1A-212ENST00000539372 AEBP1Q8IUX7 1158 aa25.97■■□□□ 1.75
TNFRSF1A-212ENST00000539372 TUBGCP6Q96RT7 1819 aa25.97■■□□□ 1.75
TNFRSF1A-212ENST00000539372 SMARCC1Q92922 1105 aaPredicted RBP25.96■■□□□ 1.75
TNFRSF1A-212ENST00000539372 QSER1Q2KHR3 1735 aa25.96■■□□□ 1.75
TNFRSF1A-212ENST00000539372 FHDC1Q9C0D6 1143 aaPredicted RBP25.95■■□□□ 1.74
TNFRSF1A-212ENST00000539372 TMOD3Q9NYL9 352 aa25.95■■□□□ 1.74
TNFRSF1A-212ENST00000539372 CNGB1Q14028 1251 aaPredicted RBP25.94■■□□□ 1.74
TNFRSF1A-212ENST00000539372 ARXQ96QS3 562 aa25.94■■□□□ 1.74
TNFRSF1A-212ENST00000539372 MSH5O43196 834 aa25.93■■□□□ 1.74
TNFRSF1A-212ENST00000539372 IL13P35225 146 aa25.93■■□□□ 1.74
TNFRSF1A-212ENST00000539372 MTHFSP49914 203 aa25.93■■□□□ 1.74
TNFRSF1A-212ENST00000539372 PLEKHO1Q53GL0 409 aaPredicted RBP25.93■■□□□ 1.74
TNFRSF1A-212ENST00000539372 SULT6B1Q6IMI4 303 aa25.93■■□□□ 1.74
TNFRSF1A-212ENST00000539372 SLC16A10Q8TF71 515 aa25.93■■□□□ 1.74
TNFRSF1A-212ENST00000539372 PLEKHG2Q9H7P9 1386 aa25.93■■□□□ 1.74
TNFRSF1A-212ENST00000539372 C5P01031 1676 aa25.93■■□□□ 1.74
TNFRSF1A-212ENST00000539372 ZNF530Q6P9A1 599 aaPredicted RBP25.91■■□□□ 1.74
TNFRSF1A-212ENST00000539372 COL23A1Q86Y22 540 aaPredicted RBP25.91■■□□□ 1.74
TNFRSF1A-212ENST00000539372 SYT17Q9BSW7 474 aa25.91■■□□□ 1.74
TNFRSF1A-212ENST00000539372 ASAP1Q9ULH1 1129 aa25.91■■□□□ 1.74
TNFRSF1A-212ENST00000539372 DCAF8L1A6NGE4 600 aa25.9■■□□□ 1.74
TNFRSF1A-212ENST00000539372 AMOTQ4VCS5 1084 aa25.89■■□□□ 1.74
TNFRSF1A-212ENST00000539372 LOC102724428A0A0B4J2F2 783 aa25.88■■□□□ 1.73
TNFRSF1A-212ENST00000539372 POLD1P28340 1107 aa25.88■■□□□ 1.73
TNFRSF1A-212ENST00000539372 SIK1P57059 783 aa25.88■■□□□ 1.73
TNFRSF1A-212ENST00000539372 TAF1LQ8IZX4 1826 aa25.87■■□□□ 1.73
TNFRSF1A-212ENST00000539372 HSP90AB1P08238 724 aaKnown RBP25.87■■□□□ 1.73
TNFRSF1A-212ENST00000539372 DCAF5Q96JK2 942 aa25.87■■□□□ 1.73
TNFRSF1A-212ENST00000539372 AK7Q96M32 723 aa25.86■■□□□ 1.73
TNFRSF1A-212ENST00000539372 ATG3Q9NT62 314 aa25.86■■□□□ 1.73
TNFRSF1A-212ENST00000539372 KDRP35968 1356 aa25.85■■□□□ 1.73
TNFRSF1A-212ENST00000539372 ERVV-2B6SEH9 535 aa25.85■■□□□ 1.73
TNFRSF1A-212ENST00000539372 HMGB2P26583 209 aaKnown RBP25.85■■□□□ 1.73
TNFRSF1A-212ENST00000539372 KLHL34Q8N239 644 aa25.85■■□□□ 1.73
TNFRSF1A-212ENST00000539372 KDM6AO15550 1401 aaPredicted RBP25.85■■□□□ 1.73
TNFRSF1A-212ENST00000539372 C4BP0C0L5 1744 aa25.85■■□□□ 1.73
TNFRSF1A-212ENST00000539372 C1orf141Q5JVX7 400 aa25.84■■□□□ 1.73
TNFRSF1A-212ENST00000539372 MSL1Q68DK7 614 aa25.84■■□□□ 1.73
TNFRSF1A-212ENST00000539372 LINC00116Q8NCU8 138 aa25.84■■□□□ 1.73
TNFRSF1A-212ENST00000539372 SMIM5Q71RC9 77 aa25.83■■□□□ 1.73
TNFRSF1A-212ENST00000539372 AMIGO3Q86WK7 504 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms