RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CASZ1Q86V15 1759 aa30.71■■■□□ 2.51
SCARB1-206ENST00000539320 ZCRB1Q8TBF4 217 aaKnown RBP30.7■■■□□ 2.51
SCARB1-206ENST00000539320 EMILIN1Q9Y6C2 1016 aa30.7■■■□□ 2.51
SCARB1-206ENST00000539320 STK32BQ9NY57 414 aa30.69■■■□□ 2.5
SCARB1-206ENST00000539320 DOT1LQ8TEK3 1739 aa30.69■■■□□ 2.5
SCARB1-206ENST00000539320 SPON1Q9HCB6 807 aa30.68■■■□□ 2.5
SCARB1-206ENST00000539320 PAPPAQ13219 1627 aa30.67■■■□□ 2.5
SCARB1-206ENST00000539320 RAPGEF4Q8WZA2 1011 aa30.67■■■□□ 2.5
SCARB1-206ENST00000539320 TATP17735 454 aaPredicted RBP30.64■■■□□ 2.5
SCARB1-206ENST00000539320 SLC15A2Q16348 729 aa30.64■■■□□ 2.5
SCARB1-206ENST00000539320 PPM1GO15355 546 aaPredicted RBP30.61■■■□□ 2.49
SCARB1-206ENST00000539320 SYTL4Q96C24 671 aaPredicted RBP30.61■■■□□ 2.49
SCARB1-206ENST00000539320 NCAPD2Q15021 1401 aa30.61■■■□□ 2.49
SCARB1-206ENST00000539320 NSD2O96028 1365 aa30.6■■■□□ 2.49
SCARB1-206ENST00000539320 MAP2P11137 1827 aaKnown RBP30.6■■■□□ 2.49
SCARB1-206ENST00000539320 PPP1R1BQ9UD71 204 aaPredicted RBP30.6■■■□□ 2.49
SCARB1-206ENST00000539320 WASHC2AQ641Q2 1341 aa30.59■■■□□ 2.49
SCARB1-206ENST00000539320 PRIM1P49642 420 aaKnown RBP30.59■■■□□ 2.49
SCARB1-206ENST00000539320 PDGFDQ9GZP0 370 aaPredicted RBP30.59■■■□□ 2.49
SCARB1-206ENST00000539320 PCDH11XQ9BZA7 1347 aa30.58■■■□□ 2.49
SCARB1-206ENST00000539320 PCDH11YQ9BZA8 1340 aa30.58■■■□□ 2.49
SCARB1-206ENST00000539320 PANK3Q9H999 370 aa30.58■■■□□ 2.49
SCARB1-206ENST00000539320 POLKQ9UBT6 870 aa30.56■■■□□ 2.48
SCARB1-206ENST00000539320 PKD1L3Q7Z443 1732 aa30.56■■■□□ 2.48
SCARB1-206ENST00000539320 ZBTB7AO95365 584 aa30.55■■■□□ 2.48
SCARB1-206ENST00000539320 SLC27A3Q5K4L6 730 aa30.55■■■□□ 2.48
SCARB1-206ENST00000539320 LRRC4BQ9NT99 713 aa30.55■■■□□ 2.48
SCARB1-206ENST00000539320 TNNT2P45379 298 aaPredicted RBP30.53■■■□□ 2.48
SCARB1-206ENST00000539320 ZNF827Q17R98 1081 aa30.52■■■□□ 2.48
SCARB1-206ENST00000539320 LY75O60449 1722 aa30.52■■■□□ 2.48
SCARB1-206ENST00000539320 EYA1Q99502 592 aa30.49■■■□□ 2.47
SCARB1-206ENST00000539320 CYP27B1O15528 508 aa30.48■■■□□ 2.47
SCARB1-206ENST00000539320 MTFR1LQ9H019 292 aa30.48■■■□□ 2.47
SCARB1-206ENST00000539320 PTGER2P43116 358 aa30.47■■■□□ 2.47
SCARB1-206ENST00000539320 ATF5Q9Y2D1 282 aaPredicted RBP30.47■■■□□ 2.47
SCARB1-206ENST00000539320 EIF4A2Q14240 407 aaKnown RBP30.46■■■□□ 2.47
SCARB1-206ENST00000539320 AKT1S1Q96B36 256 aa30.46■■■□□ 2.47
SCARB1-206ENST00000539320 QSER1Q2KHR3 1735 aa30.46■■■□□ 2.47
SCARB1-206ENST00000539320 TOGARAM1Q9Y4F4 1720 aa30.46■■■□□ 2.47
SCARB1-206ENST00000539320 KCNQ4P56696 695 aa30.43■■■□□ 2.46
SCARB1-206ENST00000539320 CCNL1Q9UK58 526 aaPredicted RBP30.43■■■□□ 2.46
SCARB1-206ENST00000539320 SPG7Q9UQ90 795 aa30.43■■■□□ 2.46
SCARB1-206ENST00000539320 KIF7Q2M1P5 1343 aa30.43■■■□□ 2.46
SCARB1-206ENST00000539320 KNSTRNQ9Y448 316 aa30.42■■■□□ 2.46
SCARB1-206ENST00000539320 TUBGCP6Q96RT7 1819 aa30.41■■■□□ 2.46
SCARB1-206ENST00000539320 MORC1Q86VD1 984 aa30.41■■■□□ 2.46
SCARB1-206ENST00000539320 PLEKHG2Q9H7P9 1386 aa30.41■■■□□ 2.46
SCARB1-206ENST00000539320 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.4■■■□□ 2.46
SCARB1-206ENST00000539320 ITGB4P16144 1822 aa30.39■■■□□ 2.46
SCARB1-206ENST00000539320 SGIP1Q9BQI5 828 aa30.39■■■□□ 2.46
SCARB1-206ENST00000539320 IGSF1Q8N6C5 1336 aa30.39■■■□□ 2.46
SCARB1-206ENST00000539320 PALLDQ8WX93 1383 aa30.39■■■□□ 2.45
SCARB1-206ENST00000539320 MPRIPQ6WCQ1 1025 aa30.38■■■□□ 2.45
SCARB1-206ENST00000539320 PNPLA7Q6ZV29 1317 aa30.38■■■□□ 2.45
SCARB1-206ENST00000539320 NKX1-1Q15270 411 aaPredicted RBP30.37■■■□□ 2.45
SCARB1-206ENST00000539320 TFCP2L1Q9NZI6 479 aa30.37■■■□□ 2.45
SCARB1-206ENST00000539320 C5P01031 1676 aa30.35■■■□□ 2.45
SCARB1-206ENST00000539320 SLC16A10Q8TF71 515 aa30.34■■■□□ 2.45
SCARB1-206ENST00000539320 AMER1Q5JTC6 1135 aaPredicted RBP30.33■■■□□ 2.45
SCARB1-206ENST00000539320 PHKG2P15735 406 aa30.32■■■□□ 2.44
SCARB1-206ENST00000539320 IFNL2Q8IZJ0 200 aa30.32■■■□□ 2.44
SCARB1-206ENST00000539320 SMARCC1Q92922 1105 aaPredicted RBP30.32■■■□□ 2.44
SCARB1-206ENST00000539320 DCAF8L1A6NGE4 600 aa30.31■■■□□ 2.44
SCARB1-206ENST00000539320 PIGBQ92521 554 aa30.3■■■□□ 2.44
SCARB1-206ENST00000539320 ARXQ96QS3 562 aa30.3■■■□□ 2.44
SCARB1-206ENST00000539320 FHDC1Q9C0D6 1143 aaPredicted RBP30.3■■■□□ 2.44
SCARB1-206ENST00000539320 TAF1LQ8IZX4 1826 aa30.29■■■□□ 2.44
SCARB1-206ENST00000539320 COL24A1Q17RW2 1714 aa30.28■■■□□ 2.44
SCARB1-206ENST00000539320 HMGB2P26583 209 aaKnown RBP30.28■■■□□ 2.44
SCARB1-206ENST00000539320 SYT17Q9BSW7 474 aa30.27■■■□□ 2.44
SCARB1-206ENST00000539320 TMOD3Q9NYL9 352 aa30.27■■■□□ 2.44
SCARB1-206ENST00000539320 MAP3K5Q99683 1374 aa30.27■■■□□ 2.44
SCARB1-206ENST00000539320 POLD1P28340 1107 aa30.25■■■□□ 2.43
SCARB1-206ENST00000539320 C4BP0C0L5 1744 aa30.24■■■□□ 2.43
SCARB1-206ENST00000539320 PLEKHO1Q53GL0 409 aaPredicted RBP30.23■■■□□ 2.43
SCARB1-206ENST00000539320 AEBP1Q8IUX7 1158 aa30.23■■■□□ 2.43
SCARB1-206ENST00000539320 PER1O15534 1290 aaPredicted RBP30.21■■■□□ 2.43
SCARB1-206ENST00000539320 COL23A1Q86Y22 540 aaPredicted RBP30.21■■■□□ 2.43
SCARB1-206ENST00000539320 KDRP35968 1356 aa30.2■■■□□ 2.43
SCARB1-206ENST00000539320 MSH5O43196 834 aa30.2■■■□□ 2.43
SCARB1-206ENST00000539320 HSP90AB1P08238 724 aaKnown RBP30.2■■■□□ 2.43
SCARB1-206ENST00000539320 IL13P35225 146 aa30.2■■■□□ 2.43
SCARB1-206ENST00000539320 AMOTQ4VCS5 1084 aa30.2■■■□□ 2.43
SCARB1-206ENST00000539320 ZNF530Q6P9A1 599 aaPredicted RBP30.2■■■□□ 2.43
SCARB1-206ENST00000539320 LOC102724428A0A0B4J2F2 783 aa30.19■■■□□ 2.42
SCARB1-206ENST00000539320 SIK1P57059 783 aa30.19■■■□□ 2.42
SCARB1-206ENST00000539320 SULT6B1Q6IMI4 303 aa30.18■■■□□ 2.42
SCARB1-206ENST00000539320 AK7Q96M32 723 aa30.18■■■□□ 2.42
SCARB1-206ENST00000539320 ASAP1Q9ULH1 1129 aa30.18■■■□□ 2.42
SCARB1-206ENST00000539320 KDM6AO15550 1401 aaPredicted RBP30.18■■■□□ 2.42
SCARB1-206ENST00000539320 CC2D1BQ5T0F9 858 aaKnown RBP30.17■■■□□ 2.42
SCARB1-206ENST00000539320 FLAD1Q8NFF5 587 aa30.17■■■□□ 2.42
SCARB1-206ENST00000539320 DCAF5Q96JK2 942 aa30.17■■■□□ 2.42
SCARB1-206ENST00000539320 YY1P25490 414 aa30.16■■■□□ 2.42
SCARB1-206ENST00000539320 NPC1L1Q9UHC9 1359 aa30.15■■■□□ 2.42
SCARB1-206ENST00000539320 UBR3Q6ZT12 1888 aa30.15■■■□□ 2.42
SCARB1-206ENST00000539320 ERVV-2B6SEH9 535 aa30.15■■■□□ 2.42
SCARB1-206ENST00000539320 MTHFSP49914 203 aa30.15■■■□□ 2.42
SCARB1-206ENST00000539320 KLHL34Q8N239 644 aa30.14■■■□□ 2.42
SCARB1-206ENST00000539320 ATG3Q9NT62 314 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms