RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 RAB15P59190 212 aa12.19□□□□□ -0.46
TUBD1-206ENST00000539018 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
TUBD1-206ENST00000539018 VPS8Q8N3P4 1428 aa12.19□□□□□ -0.46
TUBD1-206ENST00000539018 ZEB1P37275 1124 aaPredicted RBP12.17□□□□□ -0.46
TUBD1-206ENST00000539018 PHTF2Q8N3S3 785 aa12.17□□□□□ -0.46
TUBD1-206ENST00000539018 CCDC97Q96F63 343 aaPredicted RBP12.17□□□□□ -0.46
TUBD1-206ENST00000539018 UCN2Q96RP3 112 aa12.17□□□□□ -0.46
TUBD1-206ENST00000539018 PIK3CDO00329 1044 aa12.16□□□□□ -0.46
TUBD1-206ENST00000539018 SMPD1P17405 629 aa12.16□□□□□ -0.46
TUBD1-206ENST00000539018 DHX9Q08211 1270 aaKnown RBP12.16□□□□□ -0.46
TUBD1-206ENST00000539018 NNTQ13423 1086 aa12.16□□□□□ -0.46
TUBD1-206ENST00000539018 CCDC125Q86Z20 511 aa12.16□□□□□ -0.46
TUBD1-206ENST00000539018 SERPINA10Q9UK55 444 aa12.16□□□□□ -0.46
TUBD1-206ENST00000539018 EFCAB5A4FU69 1503 aa12.16□□□□□ -0.46
TUBD1-206ENST00000539018 NR3C2P08235 984 aa12.15□□□□□ -0.46
TUBD1-206ENST00000539018 CCDC116Q8IYX3 515 aa12.15□□□□□ -0.46
TUBD1-206ENST00000539018 CCDC82Q8N4S0 544 aa12.15□□□□□ -0.46
TUBD1-206ENST00000539018 IRX2Q9BZI1 471 aaPredicted RBP12.15□□□□□ -0.46
TUBD1-206ENST00000539018 ADAMTS12P58397 1594 aa12.14□□□□□ -0.47
TUBD1-206ENST00000539018 GFRA3O60609 400 aa12.14□□□□□ -0.47
TUBD1-206ENST00000539018 SKIP12755 728 aa12.14□□□□□ -0.47
TUBD1-206ENST00000539018 NFATC2IPQ8NCF5 419 aa12.14□□□□□ -0.47
TUBD1-206ENST00000539018 ERVH48-1M5A8F1 160 aa12.13□□□□□ -0.47
TUBD1-206ENST00000539018 NRG2O14511 850 aaPredicted RBP12.13□□□□□ -0.47
TUBD1-206ENST00000539018 CCDC85AQ96PX6 553 aaPredicted RBP12.13□□□□□ -0.47
TUBD1-206ENST00000539018 PPP1R12CQ9BZL4 782 aa12.13□□□□□ -0.47
TUBD1-206ENST00000539018 PCDHB11Q9Y5F2 797 aa12.13□□□□□ -0.47
TUBD1-206ENST00000539018 GRIN2BQ13224 1484 aa12.13□□□□□ -0.47
TUBD1-206ENST00000539018 FAM187AA6NFU0 413 aa12.12□□□□□ -0.47
TUBD1-206ENST00000539018 TBC1D9Q6ZT07 1266 aa12.12□□□□□ -0.47
TUBD1-206ENST00000539018 PLPP7Q8NBV4 271 aa12.12□□□□□ -0.47
TUBD1-206ENST00000539018 DOLKQ9UPQ8 538 aa12.12□□□□□ -0.47
TUBD1-206ENST00000539018 EIF4G3O43432 1585 aaKnown RBP12.12□□□□□ -0.47
TUBD1-206ENST00000539018 ATP9BO43861 1147 aa12.11□□□□□ -0.47
TUBD1-206ENST00000539018 MAP7D1Q3KQU3 841 aa12.11□□□□□ -0.47
TUBD1-206ENST00000539018 PPP1R26Q5T8A7 1209 aaPredicted RBP12.11□□□□□ -0.47
TUBD1-206ENST00000539018 TFIP11Q9UBB9 837 aaKnown RBP12.11□□□□□ -0.47
TUBD1-206ENST00000539018 CHIC2Q9UKJ5 165 aa12.11□□□□□ -0.47
TUBD1-206ENST00000539018 EMILIN1Q9Y6C2 1016 aa12.11□□□□□ -0.47
TUBD1-206ENST00000539018 PALM3A6NDB9 673 aaPredicted RBP12.1□□□□□ -0.47
TUBD1-206ENST00000539018 LAPTM4AQ15012 233 aa12.1□□□□□ -0.47
TUBD1-206ENST00000539018 TRIM52Q96A61 297 aa12.1□□□□□ -0.47
TUBD1-206ENST00000539018 PGPEP1Q9NXJ5 209 aa12.1□□□□□ -0.47
TUBD1-206ENST00000539018 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
TUBD1-206ENST00000539018 ARAP1Q96P48 1450 aa12.09□□□□□ -0.47
TUBD1-206ENST00000539018 TDRD9Q8NDG6 1382 aaKnown RBP12.09□□□□□ -0.47
TUBD1-206ENST00000539018 TSGA10IPQ3SY00 556 aa12.09□□□□□ -0.47
TUBD1-206ENST00000539018 HPS1Q92902 700 aa12.09□□□□□ -0.47
TUBD1-206ENST00000539018 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
TUBD1-206ENST00000539018 TMPRSS4Q9NRS4 437 aa12.09□□□□□ -0.47
TUBD1-206ENST00000539018 USP17L5A8MUK1 530 aa12.08□□□□□ -0.48
TUBD1-206ENST00000539018 TRAF7Q6Q0C0 670 aa12.08□□□□□ -0.48
TUBD1-206ENST00000539018 MAFBQ9Y5Q3 323 aaPredicted RBP12.08□□□□□ -0.48
TUBD1-206ENST00000539018 ARHGAP35Q9NRY4 1499 aa12.08□□□□□ -0.48
TUBD1-206ENST00000539018 WDR4P57081 412 aaKnown RBP12.07□□□□□ -0.48
TUBD1-206ENST00000539018 PKDCCQ504Y2 493 aa12.07□□□□□ -0.48
TUBD1-206ENST00000539018 OXLD1Q5BKU9 147 aa12.07□□□□□ -0.48
TUBD1-206ENST00000539018 ARID3AQ99856 593 aa12.07□□□□□ -0.48
TUBD1-206ENST00000539018 USP17L3A6NCW0 530 aa12.06□□□□□ -0.48
TUBD1-206ENST00000539018 USP17L4A6NCW7 530 aa12.06□□□□□ -0.48
TUBD1-206ENST00000539018 LZTS3O60299 673 aaPredicted RBP12.06□□□□□ -0.48
TUBD1-206ENST00000539018 DGAT1O75907 488 aa12.06□□□□□ -0.48
TUBD1-206ENST00000539018 USP17L2Q6R6M4 530 aa12.06□□□□□ -0.48
TUBD1-206ENST00000539018 USP17L1Q7RTZ2 530 aa12.06□□□□□ -0.48
TUBD1-206ENST00000539018 ZNF784Q8NCA9 323 aaPredicted RBP12.06□□□□□ -0.48
TUBD1-206ENST00000539018 CDCA7Q9BWT1 371 aaPredicted RBP12.06□□□□□ -0.48
TUBD1-206ENST00000539018 MAGI1Q96QZ7 1491 aaPredicted RBP12.06□□□□□ -0.48
TUBD1-206ENST00000539018 ZIC2O95409 532 aaPredicted RBP12.05□□□□□ -0.48
TUBD1-206ENST00000539018 LMOD1P29536 600 aaPredicted RBP12.05□□□□□ -0.48
TUBD1-206ENST00000539018 MYT1Q01538 1121 aa12.05□□□□□ -0.48
TUBD1-206ENST00000539018 NCOA4Q13772 614 aa12.05□□□□□ -0.48
TUBD1-206ENST00000539018 EML3Q32P44 896 aa12.05□□□□□ -0.48
TUBD1-206ENST00000539018 CFAP70Q5T0N1 1121 aa12.05□□□□□ -0.48
TUBD1-206ENST00000539018 PLEKHM2Q8IWE5 1019 aa12.05□□□□□ -0.48
TUBD1-206ENST00000539018 DEPDC4Q8N2C3 294 aa12.05□□□□□ -0.48
TUBD1-206ENST00000539018 CYLDQ9NQC7 956 aa12.05□□□□□ -0.48
TUBD1-206ENST00000539018 TIMP2P16035 220 aa12.04□□□□□ -0.48
TUBD1-206ENST00000539018 CC2D2BQ6DHV5 1058 aa12.04□□□□□ -0.48
TUBD1-206ENST00000539018 ITPKCQ96DU7 683 aa12.04□□□□□ -0.48
TUBD1-206ENST00000539018 SIRT1Q96EB6 747 aa12.04□□□□□ -0.48
TUBD1-206ENST00000539018 KLF16Q9BXK1 252 aaPredicted RBP12.04□□□□□ -0.48
TUBD1-206ENST00000539018 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
TUBD1-206ENST00000539018 SAMD9Q5K651 1589 aa12.04□□□□□ -0.48
TUBD1-206ENST00000539018 MAP3K1Q13233 1512 aa12.03□□□□□ -0.48
TUBD1-206ENST00000539018 MYCP01106 439 aaPredicted RBP12.03□□□□□ -0.48
TUBD1-206ENST00000539018 AVPP01185 164 aa12.03□□□□□ -0.48
TUBD1-206ENST00000539018 ERVK-9P63128 1117 aa12.03□□□□□ -0.48
TUBD1-206ENST00000539018 USP4Q13107 963 aa12.03□□□□□ -0.48
TUBD1-206ENST00000539018 ZFAND3Q9H8U3 227 aa12.03□□□□□ -0.48
TUBD1-206ENST00000539018 IQGAP2Q13576 1575 aa12.03□□□□□ -0.48
TUBD1-206ENST00000539018 RFX1P22670 979 aa12.02□□□□□ -0.49
TUBD1-206ENST00000539018 SCTRP47872 440 aa12.02□□□□□ -0.49
TUBD1-206ENST00000539018 CFAP43Q8NDM7 1665 aa12.02□□□□□ -0.49
TUBD1-206ENST00000539018 LILRA1O75019 489 aa12.01□□□□□ -0.49
TUBD1-206ENST00000539018 AQRO60306 1485 aaKnown RBP eCLIP12.01□□□□□ -0.49
TUBD1-206ENST00000539018 CAPN5O15484 640 aaPredicted RBP12□□□□□ -0.49
TUBD1-206ENST00000539018 NOD1Q9Y239 953 aa12□□□□□ -0.49
TUBD1-206ENST00000539018 SNAPC4Q5SXM2 1469 aa12□□□□□ -0.49
TUBD1-206ENST00000539018 FYCO1Q9BQS8 1478 aa12□□□□□ -0.49
TUBD1-206ENST00000539018 ZNF608Q9ULD9 1512 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms