RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 A0A1W2PP64 1363 aa20.05■□□□□ 0.8
PBX3-212ENST00000538998 NSD2O96028 1365 aa20.05■□□□□ 0.8
PBX3-212ENST00000538998 KAT6BQ8WYB5 2073 aa20.04■□□□□ 0.8
PBX3-212ENST00000538998 NEUROD1Q13562 356 aa20.04■□□□□ 0.8
PBX3-212ENST00000538998 CCNL1Q9UK58 526 aaPredicted RBP20.04■□□□□ 0.8
PBX3-212ENST00000538998 LY75O60449 1722 aa20.04■□□□□ 0.8
PBX3-212ENST00000538998 DOT1LQ8TEK3 1739 aa20.04■□□□□ 0.8
PBX3-212ENST00000538998 YBX3P16989 372 aaKnown RBP eCLIP20.03■□□□□ 0.8
PBX3-212ENST00000538998 CARD11Q9BXL7 1154 aa20.03■□□□□ 0.8
PBX3-212ENST00000538998 MSH5O43196 834 aa20.02■□□□□ 0.8
PBX3-212ENST00000538998 ZCRB1Q8TBF4 217 aaKnown RBP20.02■□□□□ 0.8
PBX3-212ENST00000538998 PUS7Q96PZ0 661 aaKnown RBP20.02■□□□□ 0.8
PBX3-212ENST00000538998 USP47Q96K76 1375 aa20■□□□□ 0.79
PBX3-212ENST00000538998 GOLGB1Q14789 3259 aaKnown RBP20■□□□□ 0.79
PBX3-212ENST00000538998 HOXC9P31274 260 aa19.99■□□□□ 0.79
PBX3-212ENST00000538998 COL23A1Q86Y22 540 aaPredicted RBP19.99■□□□□ 0.79
PBX3-212ENST00000538998 COG3Q96JB2 828 aa19.99■□□□□ 0.79
PBX3-212ENST00000538998 MAP3K19Q56UN5 1328 aa19.99■□□□□ 0.79
PBX3-212ENST00000538998 MEGF6O75095 1541 aa19.98■□□□□ 0.79
PBX3-212ENST00000538998 HMGB2P26583 209 aaKnown RBP19.98■□□□□ 0.79
PBX3-212ENST00000538998 AMPHP49418 695 aa19.98■□□□□ 0.79
PBX3-212ENST00000538998 ATP10DQ9P241 1426 aa19.98■□□□□ 0.79
PBX3-212ENST00000538998 CGNL1Q0VF96 1302 aa19.97■□□□□ 0.79
PBX3-212ENST00000538998 RTL1A6NKG5 1358 aa19.96■□□□□ 0.79
PBX3-212ENST00000538998 MSL1Q68DK7 614 aa19.96■□□□□ 0.79
PBX3-212ENST00000538998 CD2APQ9Y5K6 639 aa19.96■□□□□ 0.79
PBX3-212ENST00000538998 FLAD1Q8NFF5 587 aa19.95■□□□□ 0.78
PBX3-212ENST00000538998 GPBP1L1Q9HC44 474 aaPredicted RBP19.94■□□□□ 0.78
PBX3-212ENST00000538998 CEP350Q5VT06 3117 aa19.93■□□□□ 0.78
PBX3-212ENST00000538998 RAPGEF4Q8WZA2 1011 aa19.92■□□□□ 0.78
PBX3-212ENST00000538998 ADCY9O60503 1353 aa19.92■□□□□ 0.78
PBX3-212ENST00000538998 SMG6Q86US8 1419 aaKnown RBP19.92■□□□□ 0.78
PBX3-212ENST00000538998 C5P01031 1676 aa19.91■□□□□ 0.78
PBX3-212ENST00000538998 NBPF6Q5VWK0 638 aa19.91■□□□□ 0.78
PBX3-212ENST00000538998 NBPF4Q96M43 638 aa19.91■□□□□ 0.78
PBX3-212ENST00000538998 FBLN1P23142 703 aa19.9■□□□□ 0.78
PBX3-212ENST00000538998 PCDH11XQ9BZA7 1347 aa19.9■□□□□ 0.78
PBX3-212ENST00000538998 PCDH11YQ9BZA8 1340 aa19.9■□□□□ 0.78
PBX3-212ENST00000538998 PALLDQ8WX93 1383 aa19.9■□□□□ 0.78
PBX3-212ENST00000538998 RGPD2P0DJD1 1756 aa19.89■□□□□ 0.77
PBX3-212ENST00000538998 TATP17735 454 aaPredicted RBP19.89■□□□□ 0.77
PBX3-212ENST00000538998 SLC24A1O60721 1099 aa19.88■□□□□ 0.77
PBX3-212ENST00000538998 HSPA6P17066 643 aa19.88■□□□□ 0.77
PBX3-212ENST00000538998 USHBP1Q8N6Y0 703 aa19.88■□□□□ 0.77
PBX3-212ENST00000538998 RRS1Q15050 365 aaKnown RBP19.87■□□□□ 0.77
PBX3-212ENST00000538998 NSD3Q9BZ95 1437 aa19.86■□□□□ 0.77
PBX3-212ENST00000538998 TESK2Q96S53 571 aa19.86■□□□□ 0.77
PBX3-212ENST00000538998 SMARCC1Q92922 1105 aaPredicted RBP19.85■□□□□ 0.77
PBX3-212ENST00000538998 AK7Q96M32 723 aa19.85■□□□□ 0.77
PBX3-212ENST00000538998 MPRIPQ6WCQ1 1025 aa19.84■□□□□ 0.77
PBX3-212ENST00000538998 ZNF526Q8TF50 670 aaPredicted RBP19.84■□□□□ 0.77
PBX3-212ENST00000538998 C4BP0C0L5 1744 aa19.84■□□□□ 0.77
PBX3-212ENST00000538998 INSRP06213 1382 aa19.83■□□□□ 0.77
PBX3-212ENST00000538998 TONSLQ96HA7 1378 aa19.83■□□□□ 0.77
PBX3-212ENST00000538998 IGSF1Q8N6C5 1336 aa19.83■□□□□ 0.77
PBX3-212ENST00000538998 TAF1LQ8IZX4 1826 aa19.83■□□□□ 0.76
PBX3-212ENST00000538998 ST20-MTHFSA0A0A6YYL1 179 aa19.82■□□□□ 0.76
PBX3-212ENST00000538998 FYB1O15117 783 aa19.82■□□□□ 0.76
PBX3-212ENST00000538998 KIF24Q5T7B8 1368 aa19.82■□□□□ 0.76
PBX3-212ENST00000538998 GGNBP2Q9H3C7 697 aa19.81■□□□□ 0.76
PBX3-212ENST00000538998 FLT4P35916 1363 aa19.81■□□□□ 0.76
PBX3-212ENST00000538998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.8■□□□□ 0.76
PBX3-212ENST00000538998 CYP27B1O15528 508 aa19.8■□□□□ 0.76
PBX3-212ENST00000538998 PHF14O94880 888 aa19.8■□□□□ 0.76
PBX3-212ENST00000538998 SSFA2P28290 1259 aa19.8■□□□□ 0.76
PBX3-212ENST00000538998 TOGARAM1Q9Y4F4 1720 aa19.79■□□□□ 0.76
PBX3-212ENST00000538998 HSP90AB2PQ58FF8 381 aa19.79■□□□□ 0.76
PBX3-212ENST00000538998 AMIGO3Q86WK7 504 aa19.79■□□□□ 0.76
PBX3-212ENST00000538998 PIGBQ92521 554 aa19.77■□□□□ 0.76
PBX3-212ENST00000538998 WWC3Q9ULE0 1092 aa19.77■□□□□ 0.76
PBX3-212ENST00000538998 UBR3Q6ZT12 1888 aa19.77■□□□□ 0.76
PBX3-212ENST00000538998 CICQ96RK0 1608 aaPredicted RBP19.76■□□□□ 0.75
PBX3-212ENST00000538998 KIF3CO14782 793 aa19.75■□□□□ 0.75
PBX3-212ENST00000538998 PKD1L3Q7Z443 1732 aa19.75■□□□□ 0.75
PBX3-212ENST00000538998 LOC102724428A0A0B4J2F2 783 aa19.74■□□□□ 0.75
PBX3-212ENST00000538998 SIK1P57059 783 aa19.74■□□□□ 0.75
PBX3-212ENST00000538998 NKX1-1Q15270 411 aaPredicted RBP19.74■□□□□ 0.75
PBX3-212ENST00000538998 ITGB4P16144 1822 aa19.74■□□□□ 0.75
PBX3-212ENST00000538998 TMF1P82094 1093 aa19.73■□□□□ 0.75
PBX3-212ENST00000538998 SMIM5Q71RC9 77 aa19.73■□□□□ 0.75
PBX3-212ENST00000538998 LINC00116Q8NCU8 138 aa19.73■□□□□ 0.75
PBX3-212ENST00000538998 SPG7Q9UQ90 795 aa19.73■□□□□ 0.75
PBX3-212ENST00000538998 NCAPD2Q15021 1401 aa19.73■□□□□ 0.75
PBX3-212ENST00000538998 APLP1P51693 650 aa19.72■□□□□ 0.75
PBX3-212ENST00000538998 GNPATO15228 680 aa19.71■□□□□ 0.75
PBX3-212ENST00000538998 TMOD3Q9NYL9 352 aa19.71■□□□□ 0.75
PBX3-212ENST00000538998 KIF20BQ96Q89 1820 aa19.71■□□□□ 0.75
PBX3-212ENST00000538998 MAP2P11137 1827 aaKnown RBP19.7■□□□□ 0.74
PBX3-212ENST00000538998 PXDNLA1KZ92 1463 aa19.69■□□□□ 0.74
PBX3-212ENST00000538998 MMP10P09238 476 aa19.69■□□□□ 0.74
PBX3-212ENST00000538998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.69■□□□□ 0.74
PBX3-212ENST00000538998 EMILIN1Q9Y6C2 1016 aa19.69■□□□□ 0.74
PBX3-212ENST00000538998 TOMM70O94826 608 aa19.68■□□□□ 0.74
PBX3-212ENST00000538998 ATP6V1AP38606 617 aa19.68■□□□□ 0.74
PBX3-212ENST00000538998 TGFB2P61812 414 aa19.68■□□□□ 0.74
PBX3-212ENST00000538998 ITPK1Q13572 414 aa19.68■□□□□ 0.74
PBX3-212ENST00000538998 CDCA8Q53HL2 280 aa19.68■□□□□ 0.74
PBX3-212ENST00000538998 ASAP1Q9ULH1 1129 aa19.67■□□□□ 0.74
PBX3-212ENST00000538998 PPM1GO15355 546 aaPredicted RBP19.65■□□□□ 0.74
PBX3-212ENST00000538998 IFNL2Q8IZJ0 200 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms