RNA–Protein interactions for RNA: ENST00000538979.5

SCNN1A-212, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 771 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-212ENST00000538979 USP47Q96K76 1375 aa20.58■□□□□ 0.88
SCNN1A-212ENST00000538979 POLD1P28340 1107 aa20.57■□□□□ 0.88
SCNN1A-212ENST00000538979 SYT17Q9BSW7 474 aa20.57■□□□□ 0.88
SCNN1A-212ENST00000538979 MAP3K5Q99683 1374 aa20.57■□□□□ 0.88
SCNN1A-212ENST00000538979 ZCRB1Q8TBF4 217 aaKnown RBP20.56■□□□□ 0.88
SCNN1A-212ENST00000538979 RAPGEF4Q8WZA2 1011 aa20.56■□□□□ 0.88
SCNN1A-212ENST00000538979 COL24A1Q17RW2 1714 aa20.56■□□□□ 0.88
SCNN1A-212ENST00000538979 KIF24Q5T7B8 1368 aa20.55■□□□□ 0.88
SCNN1A-212ENST00000538979 TFCP2L1Q9NZI6 479 aa20.54■□□□□ 0.88
SCNN1A-212ENST00000538979 MEGF6O75095 1541 aa20.53■□□□□ 0.88
SCNN1A-212ENST00000538979 SGIP1Q9BQI5 828 aa20.53■□□□□ 0.88
SCNN1A-212ENST00000538979 C5P01031 1676 aa20.53■□□□□ 0.88
SCNN1A-212ENST00000538979 FLT4P35916 1363 aa20.52■□□□□ 0.88
SCNN1A-212ENST00000538979 ZNF827Q17R98 1081 aa20.52■□□□□ 0.88
SCNN1A-212ENST00000538979 TATP17735 454 aaPredicted RBP20.51■□□□□ 0.87
SCNN1A-212ENST00000538979 PRIM1P49642 420 aaKnown RBP20.51■□□□□ 0.87
SCNN1A-212ENST00000538979 LRRC4BQ9NT99 713 aa20.51■□□□□ 0.87
SCNN1A-212ENST00000538979 PCDH11XQ9BZA7 1347 aa20.51■□□□□ 0.87
SCNN1A-212ENST00000538979 PCDH11YQ9BZA8 1340 aa20.51■□□□□ 0.87
SCNN1A-212ENST00000538979 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
SCNN1A-212ENST00000538979 AKT1S1Q96B36 256 aa20.5■□□□□ 0.87
SCNN1A-212ENST00000538979 GGNBP2Q9H3C7 697 aa20.5■□□□□ 0.87
SCNN1A-212ENST00000538979 CCNL1Q9UK58 526 aaPredicted RBP20.5■□□□□ 0.87
SCNN1A-212ENST00000538979 INSRP06213 1382 aa20.49■□□□□ 0.87
SCNN1A-212ENST00000538979 FYB1O15117 783 aa20.49■□□□□ 0.87
SCNN1A-212ENST00000538979 RRS1Q15050 365 aaKnown RBP20.49■□□□□ 0.87
SCNN1A-212ENST00000538979 KLHL34Q8N239 644 aa20.49■□□□□ 0.87
SCNN1A-212ENST00000538979 TAF1LQ8IZX4 1826 aa20.48■□□□□ 0.87
SCNN1A-212ENST00000538979 ANKRD26Q9UPS8 1709 aa20.48■□□□□ 0.87
SCNN1A-212ENST00000538979 PKD1L3Q7Z443 1732 aa20.47■□□□□ 0.87
SCNN1A-212ENST00000538979 GPR162Q16538 588 aa20.47■□□□□ 0.87
SCNN1A-212ENST00000538979 ITGB4P16144 1822 aa20.47■□□□□ 0.87
SCNN1A-212ENST00000538979 PNPLA7Q6ZV29 1317 aa20.47■□□□□ 0.87
SCNN1A-212ENST00000538979 MAP2P11137 1827 aaKnown RBP20.46■□□□□ 0.87
SCNN1A-212ENST00000538979 NSD2O96028 1365 aa20.46■□□□□ 0.87
SCNN1A-212ENST00000538979 MSH5O43196 834 aa20.45■□□□□ 0.86
SCNN1A-212ENST00000538979 NBPF6Q5VWK0 638 aa20.45■□□□□ 0.86
SCNN1A-212ENST00000538979 NBPF4Q96M43 638 aa20.45■□□□□ 0.86
SCNN1A-212ENST00000538979 TIMELESSQ9UNS1 1208 aa20.44■□□□□ 0.86
SCNN1A-212ENST00000538979 FBLN1P23142 703 aa20.43■□□□□ 0.86
SCNN1A-212ENST00000538979 USHBP1Q8N6Y0 703 aa20.43■□□□□ 0.86
SCNN1A-212ENST00000538979 ZNF784Q8NCA9 323 aaPredicted RBP20.43■□□□□ 0.86
SCNN1A-212ENST00000538979 FLAD1Q8NFF5 587 aa20.43■□□□□ 0.86
SCNN1A-212ENST00000538979 NSD3Q9BZ95 1437 aa20.43■□□□□ 0.86
SCNN1A-212ENST00000538979 TOGARAM1Q9Y4F4 1720 aa20.41■□□□□ 0.86
SCNN1A-212ENST00000538979 HSP90AB2PQ58FF8 381 aa20.4■□□□□ 0.86
SCNN1A-212ENST00000538979 PELP1Q8IZL8 1130 aaKnown RBP20.4■□□□□ 0.86
SCNN1A-212ENST00000538979 SMARCC1Q92922 1105 aaPredicted RBP20.4■□□□□ 0.86
SCNN1A-212ENST00000538979 UTRNP46939 3433 aa20.4■□□□□ 0.86
SCNN1A-212ENST00000538979 C4BP0C0L5 1744 aa20.39■□□□□ 0.86
SCNN1A-212ENST00000538979 PALLDQ8WX93 1383 aa20.39■□□□□ 0.85
SCNN1A-212ENST00000538979 KCNQ4P56696 695 aa20.39■□□□□ 0.85
SCNN1A-212ENST00000538979 PPM1GO15355 546 aaPredicted RBP20.38■□□□□ 0.85
SCNN1A-212ENST00000538979 SPG7Q9UQ90 795 aa20.38■□□□□ 0.85
SCNN1A-212ENST00000538979 CLSPNQ9HAW4 1339 aa20.37■□□□□ 0.85
SCNN1A-212ENST00000538979 MPRIPQ6WCQ1 1025 aa20.37■□□□□ 0.85
SCNN1A-212ENST00000538979 GRIN3BO60391 1043 aa20.36■□□□□ 0.85
SCNN1A-212ENST00000538979 UBR3Q6ZT12 1888 aa20.35■□□□□ 0.85
SCNN1A-212ENST00000538979 AK7Q96M32 723 aa20.35■□□□□ 0.85
SCNN1A-212ENST00000538979 NCAPD2Q15021 1401 aa20.34■□□□□ 0.85
SCNN1A-212ENST00000538979 PLEKHG2Q9H7P9 1386 aa20.34■□□□□ 0.85
SCNN1A-212ENST00000538979 COL23A1Q86Y22 540 aaPredicted RBP20.33■□□□□ 0.85
SCNN1A-212ENST00000538979 EMILIN1Q9Y6C2 1016 aa20.33■□□□□ 0.85
SCNN1A-212ENST00000538979 WASHC2AQ641Q2 1341 aa20.32■□□□□ 0.84
SCNN1A-212ENST00000538979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.32■□□□□ 0.84
SCNN1A-212ENST00000538979 CYP27B1O15528 508 aa20.31■□□□□ 0.84
SCNN1A-212ENST00000538979 CARD14Q9BXL6 1004 aa20.3■□□□□ 0.84
SCNN1A-212ENST00000538979 TMOD3Q9NYL9 352 aa20.3■□□□□ 0.84
SCNN1A-212ENST00000538979 GIGYF1O75420 1035 aaPredicted RBP20.29■□□□□ 0.84
SCNN1A-212ENST00000538979 POLR3GLQ9BT43 218 aa20.29■□□□□ 0.84
SCNN1A-212ENST00000538979 CD2APQ9Y5K6 639 aa20.29■□□□□ 0.84
SCNN1A-212ENST00000538979 NKX1-1Q15270 411 aaPredicted RBP20.28■□□□□ 0.84
SCNN1A-212ENST00000538979 MSL1Q68DK7 614 aa20.28■□□□□ 0.84
SCNN1A-212ENST00000538979 IFNL2Q8IZJ0 200 aa20.28■□□□□ 0.84
SCNN1A-212ENST00000538979 NLGN2Q8NFZ4 835 aa20.28■□□□□ 0.84
SCNN1A-212ENST00000538979 C1QTNF8P60827 252 aa20.27■□□□□ 0.84
SCNN1A-212ENST00000538979 ZNF831Q5JPB2 1677 aa20.26■□□□□ 0.83
SCNN1A-212ENST00000538979 SENP3-EIF4A1A0A087X0R7 540 aa20.26■□□□□ 0.83
SCNN1A-212ENST00000538979 SSFA2P28290 1259 aa20.26■□□□□ 0.83
SCNN1A-212ENST00000538979 GOLGB1Q14789 3259 aaKnown RBP20.24■□□□□ 0.83
SCNN1A-212ENST00000538979 LOC102724428A0A0B4J2F2 783 aa20.24■□□□□ 0.83
SCNN1A-212ENST00000538979 PHF14O94880 888 aa20.24■□□□□ 0.83
SCNN1A-212ENST00000538979 SIK1P57059 783 aa20.24■□□□□ 0.83
SCNN1A-212ENST00000538979 PIGBQ92521 554 aa20.24■□□□□ 0.83
SCNN1A-212ENST00000538979 EYA1Q99502 592 aa20.24■□□□□ 0.83
SCNN1A-212ENST00000538979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.23■□□□□ 0.83
SCNN1A-212ENST00000538979 HSP90AB1P08238 724 aaKnown RBP20.23■□□□□ 0.83
SCNN1A-212ENST00000538979 EIF4G2P78344 907 aaKnown RBP eCLIP20.23■□□□□ 0.83
SCNN1A-212ENST00000538979 POLKQ9UBT6 870 aa20.22■□□□□ 0.83
SCNN1A-212ENST00000538979 PHKG2P15735 406 aa20.21■□□□□ 0.83
SCNN1A-212ENST00000538979 PCGF6Q9BYE7 350 aa20.21■□□□□ 0.83
SCNN1A-212ENST00000538979 COL5A3P25940 1745 aaPredicted RBP20.2■□□□□ 0.82
SCNN1A-212ENST00000538979 YBX3P16989 372 aaKnown RBP eCLIP20.2■□□□□ 0.82
SCNN1A-212ENST00000538979 ATP6V1AP38606 617 aa20.2■□□□□ 0.82
SCNN1A-212ENST00000538979 TNNT2P45379 298 aaPredicted RBP20.2■□□□□ 0.82
SCNN1A-212ENST00000538979 GNPATO15228 680 aa20.19■□□□□ 0.82
SCNN1A-212ENST00000538979 EIF4A2Q14240 407 aaKnown RBP20.18■□□□□ 0.82
SCNN1A-212ENST00000538979 KIF13BQ9NQT8 1826 aa20.18■□□□□ 0.82
SCNN1A-212ENST00000538979 AMOTQ4VCS5 1084 aa20.17■□□□□ 0.82
SCNN1A-212ENST00000538979 PLEKHO1Q53GL0 409 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms