RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 GAS2L1Q99501 681 aaPredicted RBP5.61□□□□□ -1.51
CBX3P4-201ENST00000538909 MX2P20592 715 aa5.6□□□□□ -1.51
CBX3P4-201ENST00000538909 BARGINQ6ZT62 677 aa5.6□□□□□ -1.51
CBX3P4-201ENST00000538909 KDF1Q8NAX2 398 aaPredicted RBP5.6□□□□□ -1.51
CBX3P4-201ENST00000538909 TRERF1Q96PN7 1200 aa5.6□□□□□ -1.51
CBX3P4-201ENST00000538909 RRAGCQ9HB90 399 aa5.6□□□□□ -1.51
CBX3P4-201ENST00000538909 ERVH48-1M5A8F1 160 aa5.59□□□□□ -1.51
CBX3P4-201ENST00000538909 OIP5O43482 229 aa5.59□□□□□ -1.51
CBX3P4-201ENST00000538909 LILRA1O75019 489 aa5.59□□□□□ -1.51
CBX3P4-201ENST00000538909 COL8A1P27658 744 aa5.59□□□□□ -1.51
CBX3P4-201ENST00000538909 GRIN2CQ14957 1233 aa5.59□□□□□ -1.51
CBX3P4-201ENST00000538909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.59□□□□□ -1.51
CBX3P4-201ENST00000538909 GMCL1Q96IK5 515 aa5.59□□□□□ -1.51
CBX3P4-201ENST00000538909 FKBPLQ9UIM3 349 aa5.59□□□□□ -1.51
CBX3P4-201ENST00000538909 SHISA8B8ZZ34 492 aa5.58□□□□□ -1.52
CBX3P4-201ENST00000538909 MEN1O00255 615 aa5.58□□□□□ -1.52
CBX3P4-201ENST00000538909 CTDSPL2Q05D32 466 aa5.58□□□□□ -1.52
CBX3P4-201ENST00000538909 ADAM32Q8TC27 787 aa5.58□□□□□ -1.52
CBX3P4-201ENST00000538909 LRRN4Q8WUT4 740 aa5.58□□□□□ -1.52
CBX3P4-201ENST00000538909 CYLDQ9NQC7 956 aa5.58□□□□□ -1.52
CBX3P4-201ENST00000538909 MKL2Q9ULH7 1088 aa5.58□□□□□ -1.52
CBX3P4-201ENST00000538909 NSFL1CQ9UNZ2 370 aaKnown RBP5.58□□□□□ -1.52
CBX3P4-201ENST00000538909 H7C1W4 665 aa5.57□□□□□ -1.52
CBX3P4-201ENST00000538909 ZMYND10O75800 440 aa5.57□□□□□ -1.52
CBX3P4-201ENST00000538909 RNF144AP50876 292 aaPredicted RBP5.57□□□□□ -1.52
CBX3P4-201ENST00000538909 NBPF20Q3BBV1 942 aa5.57□□□□□ -1.52
CBX3P4-201ENST00000538909 KRTAP4-12Q9BQ66 201 aa5.57□□□□□ -1.52
CBX3P4-201ENST00000538909 OCSTAMPQ9BR26 566 aa5.57□□□□□ -1.52
CBX3P4-201ENST00000538909 OXCT2Q9BYC2 517 aaPredicted RBP5.57□□□□□ -1.52
CBX3P4-201ENST00000538909 PTK2Q05397 1052 aa5.56□□□□□ -1.52
CBX3P4-201ENST00000538909 POU4F2Q12837 409 aa5.56□□□□□ -1.52
CBX3P4-201ENST00000538909 NR6A1Q15406 480 aa5.56□□□□□ -1.52
CBX3P4-201ENST00000538909 TUSC1Q2TAM9 212 aa5.56□□□□□ -1.52
CBX3P4-201ENST00000538909 DZIP3Q86Y13 1208 aaKnown RBP5.55□□□□□ -1.52
CBX3P4-201ENST00000538909 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
CBX3P4-201ENST00000538909 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
CBX3P4-201ENST00000538909 SUV39H2Q9H5I1 410 aa5.55□□□□□ -1.52
CBX3P4-201ENST00000538909 LRRC4BQ9NT99 713 aa5.55□□□□□ -1.52
CBX3P4-201ENST00000538909 DYRK1BQ9Y463 629 aa5.55□□□□□ -1.52
CBX3P4-201ENST00000538909 C1QTNF9BB2RNN3 333 aa5.54□□□□□ -1.52
CBX3P4-201ENST00000538909 TRIM66O15016 1216 aa5.54□□□□□ -1.52
CBX3P4-201ENST00000538909 MAP2K3P46734 347 aa5.54□□□□□ -1.52
CBX3P4-201ENST00000538909 CLK2P49760 499 aaKnown RBP5.54□□□□□ -1.52
CBX3P4-201ENST00000538909 C1orf229Q6ZS94 237 aaPredicted RBP5.54□□□□□ -1.52
CBX3P4-201ENST00000538909 NUCKS1Q9H1E3 243 aaKnown RBP5.54□□□□□ -1.52
CBX3P4-201ENST00000538909 SEMA6BQ9H3T3 888 aa5.54□□□□□ -1.52
CBX3P4-201ENST00000538909 POLR3EQ9NVU0 708 aa5.54□□□□□ -1.52
CBX3P4-201ENST00000538909 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
CBX3P4-201ENST00000538909 ATP5J2-PTCD1G3V325 749 aa5.53□□□□□ -1.52
CBX3P4-201ENST00000538909 AMPD1P23109 780 aa5.53□□□□□ -1.52
CBX3P4-201ENST00000538909 ITGB7P26010 798 aa5.53□□□□□ -1.52
CBX3P4-201ENST00000538909 SLC27A3Q5K4L6 730 aa5.53□□□□□ -1.52
CBX3P4-201ENST00000538909 ZMYM1Q5SVZ6 1142 aa5.53□□□□□ -1.52
CBX3P4-201ENST00000538909 ALYREFQ86V81 257 aaKnown RBP5.53□□□□□ -1.52
CBX3P4-201ENST00000538909 ZC3H15Q8WU90 426 aaKnown RBP5.53□□□□□ -1.52
CBX3P4-201ENST00000538909 ZC3H4Q9UPT8 1303 aaKnown RBP5.52□□□□□ -1.53
CBX3P4-201ENST00000538909 BTBD11A6QL63 1104 aa5.52□□□□□ -1.53
CBX3P4-201ENST00000538909 DOC2BQ14184 412 aa5.52□□□□□ -1.53
CBX3P4-201ENST00000538909 CD163Q86VB7 1156 aa5.52□□□□□ -1.53
CBX3P4-201ENST00000538909 EDARADDQ8WWZ3 215 aa5.52□□□□□ -1.53
CBX3P4-201ENST00000538909 KLRG1Q96E93 195 aa5.52□□□□□ -1.53
CBX3P4-201ENST00000538909 SCO2A0A1W2PP80 73 aa5.51□□□□□ -1.53
CBX3P4-201ENST00000538909 A0A1W2PRU2 124 aa5.51□□□□□ -1.53
CBX3P4-201ENST00000538909 NBPF10Q6P3W6 841 aaKnown RBP5.51□□□□□ -1.53
CBX3P4-201ENST00000538909 NBPF15Q8N660 670 aa5.51□□□□□ -1.53
CBX3P4-201ENST00000538909 NLRP3Q96P20 1036 aa5.51□□□□□ -1.53
CBX3P4-201ENST00000538909 GPAMQ9HCL2 828 aa5.51□□□□□ -1.53
CBX3P4-201ENST00000538909 TIMMDC1Q9NPL8 285 aa5.51□□□□□ -1.53
CBX3P4-201ENST00000538909 ESPNB1AK53 854 aa5.5□□□□□ -1.53
CBX3P4-201ENST00000538909 GPC1P35052 558 aa5.5□□□□□ -1.53
CBX3P4-201ENST00000538909 CHRNA4P43681 627 aa5.5□□□□□ -1.53
CBX3P4-201ENST00000538909 GPSM3Q9Y4H4 160 aa5.5□□□□□ -1.53
CBX3P4-201ENST00000538909 F11P03951 625 aa5.49□□□□□ -1.53
CBX3P4-201ENST00000538909 LINC00114Q6XXX2 140 aa5.49□□□□□ -1.53
CBX3P4-201ENST00000538909 EPS8L1Q8TE68 723 aa5.49□□□□□ -1.53
CBX3P4-201ENST00000538909 GDF2Q9UK05 429 aaPredicted RBP5.49□□□□□ -1.53
CBX3P4-201ENST00000538909 THBS1P07996 1170 aa5.48□□□□□ -1.53
CBX3P4-201ENST00000538909 HOXB4P17483 251 aaPredicted RBP5.48□□□□□ -1.53
CBX3P4-201ENST00000538909 CFHR5Q9BXR6 569 aa5.48□□□□□ -1.53
CBX3P4-201ENST00000538909 WASLO00401 505 aaPredicted RBP5.47□□□□□ -1.53
CBX3P4-201ENST00000538909 GNB5O14775 395 aa5.47□□□□□ -1.53
CBX3P4-201ENST00000538909 PPP2R2DQ66LE6 453 aa5.47□□□□□ -1.53
CBX3P4-201ENST00000538909 TAS1R3Q7RTX0 852 aa5.47□□□□□ -1.53
CBX3P4-201ENST00000538909 GOLGA6L1Q8N7Z2 621 aa5.47□□□□□ -1.53
CBX3P4-201ENST00000538909 AK7Q96M32 723 aa5.47□□□□□ -1.53
CBX3P4-201ENST00000538909 GRIP2Q9C0E4 1043 aa5.47□□□□□ -1.53
CBX3P4-201ENST00000538909 ATP1B4Q9UN42 357 aaPredicted RBP5.47□□□□□ -1.53
CBX3P4-201ENST00000538909 PHF24Q9UPV7 400 aa5.47□□□□□ -1.53
CBX3P4-201ENST00000538909 GIGYF1O75420 1035 aaPredicted RBP5.46□□□□□ -1.54
CBX3P4-201ENST00000538909 AP1G2O75843 785 aa5.46□□□□□ -1.54
CBX3P4-201ENST00000538909 BMP4P12644 408 aa5.46□□□□□ -1.54
CBX3P4-201ENST00000538909 PHKA2P46019 1235 aa5.46□□□□□ -1.54
CBX3P4-201ENST00000538909 FBXO31Q5XUX0 539 aaPredicted RBP5.46□□□□□ -1.54
CBX3P4-201ENST00000538909 GGA1Q9UJY5 639 aa5.46□□□□□ -1.54
CBX3P4-201ENST00000538909 SPATA31C2B4DYI2 1134 aa5.45□□□□□ -1.54
CBX3P4-201ENST00000538909 PDE4DQ08499 809 aa5.45□□□□□ -1.54
CBX3P4-201ENST00000538909 SEPT12Q8IYM1 358 aa5.45□□□□□ -1.54
CBX3P4-201ENST00000538909 PNMA1Q8ND90 353 aa5.45□□□□□ -1.54
CBX3P4-201ENST00000538909 BTBD6Q96KE9 485 aa5.45□□□□□ -1.54
CBX3P4-201ENST00000538909 RSPH6AQ9H0K4 717 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms