RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 PAPPAQ13219 1627 aa20.69■□□□□ 0.9
RAB40B-202ENST00000538809 NBPF6Q5VWK0 638 aa20.69■□□□□ 0.9
RAB40B-202ENST00000538809 NBPF4Q96M43 638 aa20.69■□□□□ 0.9
RAB40B-202ENST00000538809 KIF24Q5T7B8 1368 aa20.69■□□□□ 0.9
RAB40B-202ENST00000538809 PROM2Q8N271 834 aa20.68■□□□□ 0.9
RAB40B-202ENST00000538809 LY75O60449 1722 aa20.67■□□□□ 0.9
RAB40B-202ENST00000538809 ITGB4P16144 1822 aa20.67■□□□□ 0.9
RAB40B-202ENST00000538809 TUBGCP6Q96RT7 1819 aa20.67■□□□□ 0.9
RAB40B-202ENST00000538809 PPM1GO15355 546 aaPredicted RBP20.66■□□□□ 0.9
RAB40B-202ENST00000538809 TXNRD1Q16881 649 aa20.66■□□□□ 0.9
RAB40B-202ENST00000538809 TOGARAM1Q9Y4F4 1720 aa20.66■□□□□ 0.9
RAB40B-202ENST00000538809 ZCRB1Q8TBF4 217 aaKnown RBP20.64■□□□□ 0.89
RAB40B-202ENST00000538809 PANK3Q9H999 370 aa20.64■□□□□ 0.89
RAB40B-202ENST00000538809 TNNT2P45379 298 aaPredicted RBP20.63■□□□□ 0.89
RAB40B-202ENST00000538809 RAPGEF4Q8WZA2 1011 aa20.62■□□□□ 0.89
RAB40B-202ENST00000538809 QSER1Q2KHR3 1735 aa20.61■□□□□ 0.89
RAB40B-202ENST00000538809 NCAPD2Q15021 1401 aa20.61■□□□□ 0.89
RAB40B-202ENST00000538809 TATP17735 454 aaPredicted RBP20.6■□□□□ 0.89
RAB40B-202ENST00000538809 SYTL4Q96C24 671 aaPredicted RBP20.6■□□□□ 0.89
RAB40B-202ENST00000538809 NSD2O96028 1365 aa20.59■□□□□ 0.89
RAB40B-202ENST00000538809 PDGFDQ9GZP0 370 aaPredicted RBP20.59■□□□□ 0.89
RAB40B-202ENST00000538809 POLKQ9UBT6 870 aa20.59■□□□□ 0.89
RAB40B-202ENST00000538809 WASHC2AQ641Q2 1341 aa20.58■□□□□ 0.89
RAB40B-202ENST00000538809 STK32BQ9NY57 414 aa20.58■□□□□ 0.89
RAB40B-202ENST00000538809 KIF7Q2M1P5 1343 aa20.57■□□□□ 0.88
RAB40B-202ENST00000538809 PRIM1P49642 420 aaKnown RBP20.57■□□□□ 0.88
RAB40B-202ENST00000538809 TAF1LQ8IZX4 1826 aa20.57■□□□□ 0.88
RAB40B-202ENST00000538809 PCDH11XQ9BZA7 1347 aa20.55■□□□□ 0.88
RAB40B-202ENST00000538809 PCDH11YQ9BZA8 1340 aa20.55■□□□□ 0.88
RAB40B-202ENST00000538809 C5P01031 1676 aa20.55■□□□□ 0.88
RAB40B-202ENST00000538809 SLC15A2Q16348 729 aa20.55■□□□□ 0.88
RAB40B-202ENST00000538809 SPON1Q9HCB6 807 aa20.55■□□□□ 0.88
RAB40B-202ENST00000538809 EYA1Q99502 592 aa20.54■□□□□ 0.88
RAB40B-202ENST00000538809 LRRC4BQ9NT99 713 aa20.54■□□□□ 0.88
RAB40B-202ENST00000538809 ZBTB7AO95365 584 aa20.52■□□□□ 0.88
RAB40B-202ENST00000538809 EIF4A2Q14240 407 aaKnown RBP20.52■□□□□ 0.88
RAB40B-202ENST00000538809 ZNF827Q17R98 1081 aa20.52■□□□□ 0.88
RAB40B-202ENST00000538809 CYP27B1O15528 508 aa20.51■□□□□ 0.87
RAB40B-202ENST00000538809 KCNQ4P56696 695 aa20.51■□□□□ 0.87
RAB40B-202ENST00000538809 MORC1Q86VD1 984 aa20.51■□□□□ 0.87
RAB40B-202ENST00000538809 PPP1R1BQ9UD71 204 aaPredicted RBP20.51■□□□□ 0.87
RAB40B-202ENST00000538809 KNSTRNQ9Y448 316 aa20.51■□□□□ 0.87
RAB40B-202ENST00000538809 VIRMAQ69YN4 1812 aaKnown RBP20.5■□□□□ 0.87
RAB40B-202ENST00000538809 SLC27A3Q5K4L6 730 aa20.48■□□□□ 0.87
RAB40B-202ENST00000538809 COL24A1Q17RW2 1714 aa20.47■□□□□ 0.87
RAB40B-202ENST00000538809 ATF5Q9Y2D1 282 aaPredicted RBP20.47■□□□□ 0.87
RAB40B-202ENST00000538809 AMER1Q5JTC6 1135 aaPredicted RBP20.46■□□□□ 0.87
RAB40B-202ENST00000538809 SPG7Q9UQ90 795 aa20.46■□□□□ 0.87
RAB40B-202ENST00000538809 IGSF1Q8N6C5 1336 aa20.46■□□□□ 0.87
RAB40B-202ENST00000538809 AKT1S1Q96B36 256 aa20.45■□□□□ 0.86
RAB40B-202ENST00000538809 CCNL1Q9UK58 526 aaPredicted RBP20.45■□□□□ 0.86
RAB40B-202ENST00000538809 PER1O15534 1290 aaPredicted RBP20.44■□□□□ 0.86
RAB40B-202ENST00000538809 MPRIPQ6WCQ1 1025 aa20.44■□□□□ 0.86
RAB40B-202ENST00000538809 PTGER2P43116 358 aa20.43■□□□□ 0.86
RAB40B-202ENST00000538809 C4BP0C0L5 1744 aa20.43■□□□□ 0.86
RAB40B-202ENST00000538809 PALLDQ8WX93 1383 aa20.43■□□□□ 0.86
RAB40B-202ENST00000538809 UBR3Q6ZT12 1888 aa20.43■□□□□ 0.86
RAB40B-202ENST00000538809 MTFR1LQ9H019 292 aa20.42■□□□□ 0.86
RAB40B-202ENST00000538809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.41■□□□□ 0.86
RAB40B-202ENST00000538809 PNPLA7Q6ZV29 1317 aa20.41■□□□□ 0.86
RAB40B-202ENST00000538809 PHKG2P15735 406 aa20.4■□□□□ 0.86
RAB40B-202ENST00000538809 NKX1-1Q15270 411 aaPredicted RBP20.4■□□□□ 0.86
RAB40B-202ENST00000538809 SCN11AQ9UI33 1791 aa20.4■□□□□ 0.86
RAB40B-202ENST00000538809 CC2D1BQ5T0F9 858 aaKnown RBP20.39■□□□□ 0.85
RAB40B-202ENST00000538809 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
RAB40B-202ENST00000538809 IFNL2Q8IZJ0 200 aa20.39■□□□□ 0.85
RAB40B-202ENST00000538809 TFCP2L1Q9NZI6 479 aa20.39■□□□□ 0.85
RAB40B-202ENST00000538809 PLEKHG2Q9H7P9 1386 aa20.38■□□□□ 0.85
RAB40B-202ENST00000538809 CNGB1Q14028 1251 aaPredicted RBP20.38■□□□□ 0.85
RAB40B-202ENST00000538809 PIGBQ92521 554 aa20.38■□□□□ 0.85
RAB40B-202ENST00000538809 SGIP1Q9BQI5 828 aa20.38■□□□□ 0.85
RAB40B-202ENST00000538809 TMOD3Q9NYL9 352 aa20.36■□□□□ 0.85
RAB40B-202ENST00000538809 NPC1L1Q9UHC9 1359 aa20.35■□□□□ 0.85
RAB40B-202ENST00000538809 IL13P35225 146 aa20.35■□□□□ 0.85
RAB40B-202ENST00000538809 COL5A3P25940 1745 aaPredicted RBP20.35■□□□□ 0.85
RAB40B-202ENST00000538809 KDM6AO15550 1401 aaPredicted RBP20.35■□□□□ 0.85
RAB40B-202ENST00000538809 MTHFSP49914 203 aa20.34■□□□□ 0.85
RAB40B-202ENST00000538809 SULT6B1Q6IMI4 303 aa20.34■□□□□ 0.85
RAB40B-202ENST00000538809 ZNF530Q6P9A1 599 aaPredicted RBP20.34■□□□□ 0.85
RAB40B-202ENST00000538809 SMARCC1Q92922 1105 aaPredicted RBP20.34■□□□□ 0.85
RAB40B-202ENST00000538809 KDRP35968 1356 aa20.34■□□□□ 0.85
RAB40B-202ENST00000538809 PLEKHO1Q53GL0 409 aaPredicted RBP20.33■□□□□ 0.85
RAB40B-202ENST00000538809 FHDC1Q9C0D6 1143 aaPredicted RBP20.33■□□□□ 0.85
RAB40B-202ENST00000538809 ZNF831Q5JPB2 1677 aa20.32■□□□□ 0.84
RAB40B-202ENST00000538809 MSH5O43196 834 aa20.32■□□□□ 0.84
RAB40B-202ENST00000538809 ARXQ96QS3 562 aa20.32■□□□□ 0.84
RAB40B-202ENST00000538809 ASAP1Q9ULH1 1129 aa20.32■□□□□ 0.84
RAB40B-202ENST00000538809 COL3A1P02461 1466 aaPredicted RBP20.31■□□□□ 0.84
RAB40B-202ENST00000538809 COL23A1Q86Y22 540 aaPredicted RBP20.31■□□□□ 0.84
RAB40B-202ENST00000538809 SLC16A10Q8TF71 515 aa20.31■□□□□ 0.84
RAB40B-202ENST00000538809 CHD4Q14839 1912 aa20.3■□□□□ 0.84
RAB40B-202ENST00000538809 LOC102724428A0A0B4J2F2 783 aa20.29■□□□□ 0.84
RAB40B-202ENST00000538809 SIK1P57059 783 aa20.29■□□□□ 0.84
RAB40B-202ENST00000538809 AMOTQ4VCS5 1084 aa20.29■□□□□ 0.84
RAB40B-202ENST00000538809 TJP1Q07157 1748 aa20.28■□□□□ 0.84
RAB40B-202ENST00000538809 HSP90AB1P08238 724 aaKnown RBP20.28■□□□□ 0.84
RAB40B-202ENST00000538809 C1orf141Q5JVX7 400 aa20.28■□□□□ 0.84
RAB40B-202ENST00000538809 MSL1Q68DK7 614 aa20.28■□□□□ 0.84
RAB40B-202ENST00000538809 KLHL34Q8N239 644 aa20.28■□□□□ 0.84
RAB40B-202ENST00000538809 DCAF5Q96JK2 942 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms