RNA–Protein interactions for RNA: ENST00000538740.1

DDX11-212, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-212ENST00000538740 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.47■■□□□ 1.35
DDX11-212ENST00000538740 IFT57Q9NWB7 429 aa23.47■■□□□ 1.35
DDX11-212ENST00000538740 NLRP2Q9NX02 1062 aa23.47■■□□□ 1.35
DDX11-212ENST00000538740 RNF123Q5XPI4 1314 aa23.47■■□□□ 1.35
DDX11-212ENST00000538740 MTHFSDQ2M296 383 aaKnown RBP23.46■■□□□ 1.35
DDX11-212ENST00000538740 USHBP1Q8N6Y0 703 aa23.46■■□□□ 1.35
DDX11-212ENST00000538740 MAP3K5Q99683 1374 aa23.46■■□□□ 1.35
DDX11-212ENST00000538740 SPINK5Q9NQ38 1064 aaPredicted RBP23.46■■□□□ 1.35
DDX11-212ENST00000538740 COL5A2P05997 1499 aaPredicted RBP23.45■■□□□ 1.34
DDX11-212ENST00000538740 RAPGEF4Q8WZA2 1011 aa23.45■■□□□ 1.34
DDX11-212ENST00000538740 LRRC37A3O60309 1634 aa23.44■■□□□ 1.34
DDX11-212ENST00000538740 WDR17Q8IZU2 1322 aa23.44■■□□□ 1.34
DDX11-212ENST00000538740 FANCIQ9NVI1 1328 aa23.44■■□□□ 1.34
DDX11-212ENST00000538740 GNAT3A8MTJ3 354 aa23.44■■□□□ 1.34
DDX11-212ENST00000538740 FKBP8Q14318 412 aa23.44■■□□□ 1.34
DDX11-212ENST00000538740 VIRMAQ69YN4 1812 aaKnown RBP23.44■■□□□ 1.34
DDX11-212ENST00000538740 ZNF772Q68DY9 489 aaPredicted RBP23.43■■□□□ 1.34
DDX11-212ENST00000538740 TATP17735 454 aaPredicted RBP23.42■■□□□ 1.34
DDX11-212ENST00000538740 RRP1P56182 461 aaKnown RBP23.41■■□□□ 1.34
DDX11-212ENST00000538740 EVA1CP58658 441 aa23.41■■□□□ 1.34
DDX11-212ENST00000538740 MEX3CQ5U5Q3 659 aaKnown RBP23.41■■□□□ 1.34
DDX11-212ENST00000538740 CFAP44Q96MT7 982 aa23.41■■□□□ 1.34
DDX11-212ENST00000538740 PKD1L3Q7Z443 1732 aa23.41■■□□□ 1.34
DDX11-212ENST00000538740 C1orf141Q5JVX7 400 aa23.4■■□□□ 1.34
DDX11-212ENST00000538740 LAS1LQ9Y4W2 734 aaKnown RBP23.4■■□□□ 1.34
DDX11-212ENST00000538740 PLCH1Q4KWH8 1693 aa23.4■■□□□ 1.34
DDX11-212ENST00000538740 TOM1L2Q6ZVM7 507 aa23.39■■□□□ 1.33
DDX11-212ENST00000538740 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.39■■□□□ 1.33
DDX11-212ENST00000538740 OVOS2A0A0G2JMS6 1433 aa23.39■■□□□ 1.33
DDX11-212ENST00000538740 AKAP4Q5JQC9 854 aa23.38■■□□□ 1.33
DDX11-212ENST00000538740 ZNF530Q6P9A1 599 aaPredicted RBP23.38■■□□□ 1.33
DDX11-212ENST00000538740 ZNF428Q96B54 188 aa23.38■■□□□ 1.33
DDX11-212ENST00000538740 SPG7Q9UQ90 795 aa23.38■■□□□ 1.33
DDX11-212ENST00000538740 NWD2Q9ULI1 1742 aa23.38■■□□□ 1.33
DDX11-212ENST00000538740 FAM83GA6ND36 823 aa23.36■■□□□ 1.33
DDX11-212ENST00000538740 ZNF853P0CG23 659 aa23.36■■□□□ 1.33
DDX11-212ENST00000538740 TSR2Q969E8 191 aaKnown RBP23.36■■□□□ 1.33
DDX11-212ENST00000538740 THUMPD2Q9BTF0 503 aaKnown RBP23.36■■□□□ 1.33
DDX11-212ENST00000538740 CRB1P82279 1406 aa23.35■■□□□ 1.33
DDX11-212ENST00000538740 MCM10Q7L590 875 aa23.35■■□□□ 1.33
DDX11-212ENST00000538740 CARD10Q9BWT7 1032 aa23.35■■□□□ 1.33
DDX11-212ENST00000538740 BABAM1Q9NWV8 329 aa23.35■■□□□ 1.33
DDX11-212ENST00000538740 EXOSC9Q06265 439 aaKnown RBP23.34■■□□□ 1.33
DDX11-212ENST00000538740 DCTN1Q14203 1278 aa23.34■■□□□ 1.33
DDX11-212ENST00000538740 UPF1Q92900 1129 aaKnown RBP eCLIP23.33■■□□□ 1.33
DDX11-212ENST00000538740 STRN4Q9NRL3 753 aa23.33■■□□□ 1.33
DDX11-212ENST00000538740 SCN11AQ9UI33 1791 aa23.32■■□□□ 1.32
DDX11-212ENST00000538740 MBIPQ9NS73 344 aa23.32■■□□□ 1.32
DDX11-212ENST00000538740 BTG4Q9NY30 223 aa23.32■■□□□ 1.32
DDX11-212ENST00000538740 MEGF6O75095 1541 aa23.32■■□□□ 1.32
DDX11-212ENST00000538740 ADAMTS7Q9UKP4 1686 aa23.32■■□□□ 1.32
DDX11-212ENST00000538740 NRAPQ86VF7 1730 aa23.31■■□□□ 1.32
DDX11-212ENST00000538740 CHL1O00533 1208 aa23.31■■□□□ 1.32
DDX11-212ENST00000538740 WNK3Q9BYP7 1800 aa23.31■■□□□ 1.32
DDX11-212ENST00000538740 NUTM2BA6NNL0 878 aaPredicted RBP23.3■■□□□ 1.32
DDX11-212ENST00000538740 NUTM2EB1AL46 878 aaPredicted RBP23.3■■□□□ 1.32
DDX11-212ENST00000538740 HSP90AB1P08238 724 aaKnown RBP23.3■■□□□ 1.32
DDX11-212ENST00000538740 CANXP27824 592 aaKnown RBP23.3■■□□□ 1.32
DDX11-212ENST00000538740 RXRBP28702 533 aa23.3■■□□□ 1.32
DDX11-212ENST00000538740 NUTM2AQ8IVF1 878 aaPredicted RBP23.3■■□□□ 1.32
DDX11-212ENST00000538740 CEMIPQ8WUJ3 1361 aa23.29■■□□□ 1.32
DDX11-212ENST00000538740 RARSP54136 660 aaKnown RBP23.29■■□□□ 1.32
DDX11-212ENST00000538740 IL2RBP14784 551 aa23.28■■□□□ 1.32
DDX11-212ENST00000538740 TEFQ10587 303 aa23.28■■□□□ 1.32
DDX11-212ENST00000538740 ALDH1L2Q3SY69 923 aa23.28■■□□□ 1.32
DDX11-212ENST00000538740 TSPYL4Q9UJ04 414 aa23.28■■□□□ 1.32
DDX11-212ENST00000538740 KDM3BQ7LBC6 1761 aa23.27■■□□□ 1.32
DDX11-212ENST00000538740 IRX6P78412 446 aaPredicted RBP23.27■■□□□ 1.32
DDX11-212ENST00000538740 TAF7Q15545 349 aaPredicted RBP23.27■■□□□ 1.32
DDX11-212ENST00000538740 IFNL2Q8IZJ0 200 aa23.27■■□□□ 1.32
DDX11-212ENST00000538740 SOS1Q07889 1333 aaPredicted RBP23.27■■□□□ 1.32
DDX11-212ENST00000538740 SIPA1L3O60292 1781 aaPredicted RBP23.27■■□□□ 1.32
DDX11-212ENST00000538740 MS4A1P11836 297 aa23.26■■□□□ 1.31
DDX11-212ENST00000538740 LARP1Q6PKG0 1096 aaKnown RBP23.26■■□□□ 1.31
DDX11-212ENST00000538740 AFF2P51816 1311 aa23.26■■□□□ 1.31
DDX11-212ENST00000538740 PCDH11XQ9BZA7 1347 aa23.26■■□□□ 1.31
DDX11-212ENST00000538740 PCDH11YQ9BZA8 1340 aa23.26■■□□□ 1.31
DDX11-212ENST00000538740 ADAMTS2O95450 1211 aa23.25■■□□□ 1.31
DDX11-212ENST00000538740 IL17REQ8NFR9 667 aa23.25■■□□□ 1.31
DDX11-212ENST00000538740 KIF16BQ96L93 1317 aa23.25■■□□□ 1.31
DDX11-212ENST00000538740 CACNA1FO60840 1977 aa23.25■■□□□ 1.31
DDX11-212ENST00000538740 RNMTO43148 476 aaKnown RBP23.24■■□□□ 1.31
DDX11-212ENST00000538740 TWISTNBQ3B726 338 aaPredicted RBP23.24■■□□□ 1.31
DDX11-212ENST00000538740 CHMP4AQ9BY43 222 aa23.24■■□□□ 1.31
DDX11-212ENST00000538740 SMC4Q9NTJ3 1288 aa23.24■■□□□ 1.31
DDX11-212ENST00000538740 PPP4R2Q9NY27 417 aa23.23■■□□□ 1.31
DDX11-212ENST00000538740 BCAR3O75815 825 aa23.22■■□□□ 1.31
DDX11-212ENST00000538740 PHKG2P15735 406 aa23.22■■□□□ 1.31
DDX11-212ENST00000538740 ZCRB1Q8TBF4 217 aaKnown RBP23.22■■□□□ 1.31
DDX11-212ENST00000538740 IPO8O15397 1037 aaKnown RBP23.21■■□□□ 1.31
DDX11-212ENST00000538740 PDE3AQ14432 1141 aa23.21■■□□□ 1.31
DDX11-212ENST00000538740 DCAF5Q96JK2 942 aa23.21■■□□□ 1.31
DDX11-212ENST00000538740 CDCA7Q9BWT1 371 aaPredicted RBP23.21■■□□□ 1.31
DDX11-212ENST00000538740 SHANK3Q9BYB0 1731 aa23.21■■□□□ 1.31
DDX11-212ENST00000538740 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.2■■□□□ 1.3
DDX11-212ENST00000538740 SLIT2O94813 1529 aa23.2■■□□□ 1.3
DDX11-212ENST00000538740 MPRIPQ6WCQ1 1025 aa23.2■■□□□ 1.3
DDX11-212ENST00000538740 THRAP3Q9Y2W1 955 aaKnown RBP23.2■■□□□ 1.3
DDX11-212ENST00000538740 MRC1P22897 1456 aa23.19■■□□□ 1.3
DDX11-212ENST00000538740 VAMP4O75379 141 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms