RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 NCAPD2Q15021 1401 aa12.03□□□□□ -0.48
DDB1-212ENST00000538470 RRS1Q15050 365 aaKnown RBP12.03□□□□□ -0.48
DDB1-212ENST00000538470 SLC27A3Q5K4L6 730 aa12.03□□□□□ -0.48
DDB1-212ENST00000538470 NSD2O96028 1365 aa12.03□□□□□ -0.48
DDB1-212ENST00000538470 ZCRB1Q8TBF4 217 aaKnown RBP12.02□□□□□ -0.49
DDB1-212ENST00000538470 DDX54Q8TDD1 881 aaKnown RBP12.02□□□□□ -0.49
DDB1-212ENST00000538470 MTFR1LQ9H019 292 aa12.02□□□□□ -0.49
DDB1-212ENST00000538470 C5P01031 1676 aa12.02□□□□□ -0.49
DDB1-212ENST00000538470 ITGB4P16144 1822 aa12.02□□□□□ -0.49
DDB1-212ENST00000538470 TOGARAM1Q9Y4F4 1720 aa12.01□□□□□ -0.49
DDB1-212ENST00000538470 DCAF8L1A6NGE4 600 aa12.01□□□□□ -0.49
DDB1-212ENST00000538470 ZBTB7AO95365 584 aa12.01□□□□□ -0.49
DDB1-212ENST00000538470 PTGER2P43116 358 aa12.01□□□□□ -0.49
DDB1-212ENST00000538470 RAPGEF4Q8WZA2 1011 aa12.01□□□□□ -0.49
DDB1-212ENST00000538470 TAF1LQ8IZX4 1826 aa12.01□□□□□ -0.49
DDB1-212ENST00000538470 FBLN1P23142 703 aa12□□□□□ -0.49
DDB1-212ENST00000538470 NBPF6Q5VWK0 638 aa12□□□□□ -0.49
DDB1-212ENST00000538470 NBPF4Q96M43 638 aa12□□□□□ -0.49
DDB1-212ENST00000538470 PDGFDQ9GZP0 370 aaPredicted RBP12□□□□□ -0.49
DDB1-212ENST00000538470 PCDH11XQ9BZA7 1347 aa12□□□□□ -0.49
DDB1-212ENST00000538470 PCDH11YQ9BZA8 1340 aa12□□□□□ -0.49
DDB1-212ENST00000538470 MAP3K5Q99683 1374 aa12□□□□□ -0.49
DDB1-212ENST00000538470 TATP17735 454 aaPredicted RBP11.99□□□□□ -0.49
DDB1-212ENST00000538470 CARD14Q9BXL6 1004 aa11.99□□□□□ -0.49
DDB1-212ENST00000538470 PLEKHG2Q9H7P9 1386 aa11.99□□□□□ -0.49
DDB1-212ENST00000538470 CHD4Q14839 1912 aa11.99□□□□□ -0.49
DDB1-212ENST00000538470 ZNF827Q17R98 1081 aa11.98□□□□□ -0.49
DDB1-212ENST00000538470 USHBP1Q8N6Y0 703 aa11.98□□□□□ -0.49
DDB1-212ENST00000538470 AKT1S1Q96B36 256 aa11.98□□□□□ -0.49
DDB1-212ENST00000538470 SYTL4Q96C24 671 aaPredicted RBP11.98□□□□□ -0.49
DDB1-212ENST00000538470 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
DDB1-212ENST00000538470 LRRC4BQ9NT99 713 aa11.98□□□□□ -0.49
DDB1-212ENST00000538470 HMGB2P26583 209 aaKnown RBP11.97□□□□□ -0.49
DDB1-212ENST00000538470 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
DDB1-212ENST00000538470 HSP90AB2PQ58FF8 381 aa11.97□□□□□ -0.49
DDB1-212ENST00000538470 SLC16A10Q8TF71 515 aa11.97□□□□□ -0.49
DDB1-212ENST00000538470 ATF5Q9Y2D1 282 aaPredicted RBP11.97□□□□□ -0.49
DDB1-212ENST00000538470 PCGF6Q9BYE7 350 aa11.96□□□□□ -0.49
DDB1-212ENST00000538470 EMILIN1Q9Y6C2 1016 aa11.96□□□□□ -0.49
DDB1-212ENST00000538470 WASHC2AQ641Q2 1341 aa11.95□□□□□ -0.5
DDB1-212ENST00000538470 PNPLA7Q6ZV29 1317 aa11.95□□□□□ -0.5
DDB1-212ENST00000538470 YY1P25490 414 aa11.95□□□□□ -0.5
DDB1-212ENST00000538470 EIF4G2P78344 907 aaKnown RBP eCLIP11.95□□□□□ -0.5
DDB1-212ENST00000538470 CCNL1Q9UK58 526 aaPredicted RBP11.95□□□□□ -0.5
DDB1-212ENST00000538470 ARXQ96QS3 562 aa11.94□□□□□ -0.5
DDB1-212ENST00000538470 FHDC1Q9C0D6 1143 aaPredicted RBP11.94□□□□□ -0.5
DDB1-212ENST00000538470 C4BP0C0L5 1744 aa11.94□□□□□ -0.5
DDB1-212ENST00000538470 UBR3Q6ZT12 1888 aa11.93□□□□□ -0.5
DDB1-212ENST00000538470 PALLDQ8WX93 1383 aa11.93□□□□□ -0.5
DDB1-212ENST00000538470 SYT17Q9BSW7 474 aa11.93□□□□□ -0.5
DDB1-212ENST00000538470 TFCP2L1Q9NZI6 479 aa11.93□□□□□ -0.5
DDB1-212ENST00000538470 CYP27B1O15528 508 aa11.92□□□□□ -0.5
DDB1-212ENST00000538470 POLD1P28340 1107 aa11.92□□□□□ -0.5
DDB1-212ENST00000538470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.5
DDB1-212ENST00000538470 SPG7Q9UQ90 795 aa11.92□□□□□ -0.5
DDB1-212ENST00000538470 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
DDB1-212ENST00000538470 HSPA5P11021 654 aaKnown RBP11.91□□□□□ -0.5
DDB1-212ENST00000538470 SMARCC1Q92922 1105 aaPredicted RBP11.91□□□□□ -0.5
DDB1-212ENST00000538470 POLKQ9UBT6 870 aa11.91□□□□□ -0.5
DDB1-212ENST00000538470 PPM1GO15355 546 aaPredicted RBP11.9□□□□□ -0.5
DDB1-212ENST00000538470 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.5
DDB1-212ENST00000538470 CCER1Q8TC90 406 aaPredicted RBP11.9□□□□□ -0.5
DDB1-212ENST00000538470 EYA1Q99502 592 aa11.9□□□□□ -0.5
DDB1-212ENST00000538470 POLR3GLQ9BT43 218 aa11.9□□□□□ -0.5
DDB1-212ENST00000538470 FLAD1Q8NFF5 587 aa11.89□□□□□ -0.51
DDB1-212ENST00000538470 IGSF1Q8N6C5 1336 aa11.88□□□□□ -0.51
DDB1-212ENST00000538470 KCNQ4P56696 695 aa11.88□□□□□ -0.51
DDB1-212ENST00000538470 MPRIPQ6WCQ1 1025 aa11.88□□□□□ -0.51
DDB1-212ENST00000538470 COL5A3P25940 1745 aaPredicted RBP11.88□□□□□ -0.51
DDB1-212ENST00000538470 UTRNP46939 3433 aa11.87□□□□□ -0.51
DDB1-212ENST00000538470 EIF4A2Q14240 407 aaKnown RBP11.87□□□□□ -0.51
DDB1-212ENST00000538470 IFNL2Q8IZJ0 200 aa11.87□□□□□ -0.51
DDB1-212ENST00000538470 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
DDB1-212ENST00000538470 PHKG2P15735 406 aa11.86□□□□□ -0.51
DDB1-212ENST00000538470 PANK3Q9H999 370 aa11.86□□□□□ -0.51
DDB1-212ENST00000538470 VIRMAQ69YN4 1812 aaKnown RBP11.86□□□□□ -0.51
DDB1-212ENST00000538470 TNNT2P45379 298 aaPredicted RBP11.85□□□□□ -0.51
DDB1-212ENST00000538470 COL23A1Q86Y22 540 aaPredicted RBP11.85□□□□□ -0.51
DDB1-212ENST00000538470 PIGBQ92521 554 aa11.85□□□□□ -0.51
DDB1-212ENST00000538470 AK7Q96M32 723 aa11.85□□□□□ -0.51
DDB1-212ENST00000538470 TMOD3Q9NYL9 352 aa11.85□□□□□ -0.51
DDB1-212ENST00000538470 SCN11AQ9UI33 1791 aa11.84□□□□□ -0.51
DDB1-212ENST00000538470 KDRP35968 1356 aa11.84□□□□□ -0.51
DDB1-212ENST00000538470 MSH5O43196 834 aa11.84□□□□□ -0.51
DDB1-212ENST00000538470 HSP90AB1P08238 724 aaKnown RBP11.84□□□□□ -0.51
DDB1-212ENST00000538470 LOC102724428A0A0B4J2F2 783 aa11.83□□□□□ -0.52
DDB1-212ENST00000538470 SSFA2P28290 1259 aa11.83□□□□□ -0.52
DDB1-212ENST00000538470 SIK1P57059 783 aa11.83□□□□□ -0.52
DDB1-212ENST00000538470 MORC1Q86VD1 984 aa11.83□□□□□ -0.52
DDB1-212ENST00000538470 KLHL34Q8N239 644 aa11.83□□□□□ -0.52
DDB1-212ENST00000538470 KNSTRNQ9Y448 316 aa11.83□□□□□ -0.52
DDB1-212ENST00000538470 KIF13BQ9NQT8 1826 aa11.83□□□□□ -0.52
DDB1-212ENST00000538470 GPR162Q16538 588 aa11.82□□□□□ -0.52
DDB1-212ENST00000538470 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
DDB1-212ENST00000538470 KDM6AO15550 1401 aaPredicted RBP11.82□□□□□ -0.52
DDB1-212ENST00000538470 C4AP0C0L4 1744 aa11.82□□□□□ -0.52
DDB1-212ENST00000538470 ERVV-2B6SEH9 535 aa11.81□□□□□ -0.52
DDB1-212ENST00000538470 PLEKHO1Q53GL0 409 aaPredicted RBP11.81□□□□□ -0.52
DDB1-212ENST00000538470 DCAF5Q96JK2 942 aa11.81□□□□□ -0.52
DDB1-212ENST00000538470 TJP1Q07157 1748 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms