RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 PPP4CP60510 307 aa13.48□□□□□ -0.25
CD9-207ENST00000538418 EAPPQ56P03 285 aaPredicted RBP13.48□□□□□ -0.25
CD9-207ENST00000538418 POTEHQ6S545 545 aa13.48□□□□□ -0.25
CD9-207ENST00000538418 MKNK1Q9BUB5 465 aa13.48□□□□□ -0.25
CD9-207ENST00000538418 LGR5O75473 907 aa13.47□□□□□ -0.25
CD9-207ENST00000538418 TSNAXIP1Q2TAA8 658 aa13.47□□□□□ -0.25
CD9-207ENST00000538418 RNF20Q5VTR2 975 aa13.46□□□□□ -0.25
CD9-207ENST00000538418 RGL4Q8IZJ4 473 aa13.46□□□□□ -0.25
CD9-207ENST00000538418 FAM160A2Q8N612 972 aaPredicted RBP13.46□□□□□ -0.25
CD9-207ENST00000538418 PTCD1O75127 700 aaKnown RBP13.45□□□□□ -0.26
CD9-207ENST00000538418 WEE1P30291 646 aa13.45□□□□□ -0.26
CD9-207ENST00000538418 MTMR3Q13615 1198 aa13.45□□□□□ -0.26
CD9-207ENST00000538418 NAALADL2Q58DX5 795 aa13.45□□□□□ -0.26
CD9-207ENST00000538418 CARD14Q9BXL6 1004 aa13.44□□□□□ -0.26
CD9-207ENST00000538418 UNC93B1Q9H1C4 597 aa13.44□□□□□ -0.26
CD9-207ENST00000538418 USP4Q13107 963 aa13.43□□□□□ -0.26
CD9-207ENST00000538418 SPSB2Q99619 263 aa13.43□□□□□ -0.26
CD9-207ENST00000538418 TK2O00142 265 aa13.42□□□□□ -0.26
CD9-207ENST00000538418 FKBP5Q13451 457 aaPredicted RBP13.42□□□□□ -0.26
CD9-207ENST00000538418 CAPN12Q6ZSI9 719 aa13.42□□□□□ -0.26
CD9-207ENST00000538418 SH3RF1Q7Z6J0 888 aa13.42□□□□□ -0.26
CD9-207ENST00000538418 PRDM9Q9NQV7 894 aa13.42□□□□□ -0.26
CD9-207ENST00000538418 HPS5Q9UPZ3 1129 aa13.42□□□□□ -0.26
CD9-207ENST00000538418 MAGEB6P1A0A0J9YX57 407 aa13.41□□□□□ -0.26
CD9-207ENST00000538418 M0R2N6 131 aa13.41□□□□□ -0.26
CD9-207ENST00000538418 SF3A1Q15459 793 aaKnown RBP13.41□□□□□ -0.26
CD9-207ENST00000538418 UBXN4Q92575 508 aa13.41□□□□□ -0.26
CD9-207ENST00000538418 TSEN2Q8NCE0 465 aaKnown RBP13.4□□□□□ -0.26
CD9-207ENST00000538418 BACH2Q9BYV9 841 aa13.4□□□□□ -0.26
CD9-207ENST00000538418 ANKK1Q8NFD2 765 aa13.39□□□□□ -0.27
CD9-207ENST00000538418 COL26A1Q96A83 441 aa13.39□□□□□ -0.27
CD9-207ENST00000538418 SOWAHBA6NEL2 793 aa13.38□□□□□ -0.27
CD9-207ENST00000538418 ERCC5P28715 1186 aaPredicted RBP13.38□□□□□ -0.27
CD9-207ENST00000538418 MRPL58Q14197 206 aaKnown RBP13.38□□□□□ -0.27
CD9-207ENST00000538418 PTCRAQ6ISU1 281 aaPredicted RBP13.38□□□□□ -0.27
CD9-207ENST00000538418 HELQQ8TDG4 1101 aa13.38□□□□□ -0.27
CD9-207ENST00000538418 PURBQ96QR8 312 aaKnown RBP13.38□□□□□ -0.27
CD9-207ENST00000538418 TSR3Q9UJK0 312 aaKnown RBP13.38□□□□□ -0.27
CD9-207ENST00000538418 ERFEQ4G0M1 354 aa13.37□□□□□ -0.27
CD9-207ENST00000538418 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
CD9-207ENST00000538418 RBCK1Q9BYM8 510 aa13.37□□□□□ -0.27
CD9-207ENST00000538418 PPP1R1BQ9UD71 204 aaPredicted RBP13.37□□□□□ -0.27
CD9-207ENST00000538418 PCDHB11Q9Y5F2 797 aa13.37□□□□□ -0.27
CD9-207ENST00000538418 CANXP27824 592 aaKnown RBP13.36□□□□□ -0.27
CD9-207ENST00000538418 NAA30Q147X3 362 aaPredicted RBP13.36□□□□□ -0.27
CD9-207ENST00000538418 ZNF687Q8N1G0 1237 aa13.36□□□□□ -0.27
CD9-207ENST00000538418 SCAMP3O14828 347 aaKnown RBP13.35□□□□□ -0.27
CD9-207ENST00000538418 FAM13AO94988 1023 aa13.35□□□□□ -0.27
CD9-207ENST00000538418 P4HBP07237 508 aaKnown RBP13.35□□□□□ -0.27
CD9-207ENST00000538418 NPR3P17342 541 aa13.35□□□□□ -0.27
CD9-207ENST00000538418 NBPF20Q3BBV1 942 aa13.35□□□□□ -0.27
CD9-207ENST00000538418 TMC7Q7Z402 723 aa13.35□□□□□ -0.27
CD9-207ENST00000538418 BPHLQ86WA6 291 aaPredicted RBP13.35□□□□□ -0.27
CD9-207ENST00000538418 CCDC24Q8N4L8 307 aa13.35□□□□□ -0.27
CD9-207ENST00000538418 SLC10A4Q96EP9 437 aa13.34□□□□□ -0.27
CD9-207ENST00000538418 BCAMP50895 628 aa13.33□□□□□ -0.28
CD9-207ENST00000538418 HDLBPQ00341 1268 aaKnown RBP13.33□□□□□ -0.28
CD9-207ENST00000538418 AGERQ15109 404 aa13.33□□□□□ -0.28
CD9-207ENST00000538418 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
CD9-207ENST00000538418 ESPNB1AK53 854 aa13.32□□□□□ -0.28
CD9-207ENST00000538418 SEPT12Q8IYM1 358 aa13.32□□□□□ -0.28
CD9-207ENST00000538418 GOLGA8CPA6NN73 597 aa13.31□□□□□ -0.28
CD9-207ENST00000538418 FOXO3O43524 673 aa13.31□□□□□ -0.28
CD9-207ENST00000538418 SMARCA5O60264 1052 aaPredicted RBP13.31□□□□□ -0.28
CD9-207ENST00000538418 IGFBP4P22692 258 aa13.31□□□□□ -0.28
CD9-207ENST00000538418 SPATA32Q96LK8 384 aa13.31□□□□□ -0.28
CD9-207ENST00000538418 PCDH10Q9P2E7 1040 aa13.31□□□□□ -0.28
CD9-207ENST00000538418 ADGRD1Q6QNK2 874 aa13.3□□□□□ -0.28
CD9-207ENST00000538418 GAS2L2Q8NHY3 880 aa13.3□□□□□ -0.28
CD9-207ENST00000538418 BAP1Q92560 729 aa13.3□□□□□ -0.28
CD9-207ENST00000538418 ZNF358Q9NW07 568 aa13.3□□□□□ -0.28
CD9-207ENST00000538418 TREHO43280 583 aa13.29□□□□□ -0.28
CD9-207ENST00000538418 NDUFB5O43674 189 aa13.29□□□□□ -0.28
CD9-207ENST00000538418 C4orf48Q5BLP8 95 aa13.29□□□□□ -0.28
CD9-207ENST00000538418 FOXJ1Q92949 421 aa13.29□□□□□ -0.28
CD9-207ENST00000538418 MYCP01106 439 aaPredicted RBP13.28□□□□□ -0.28
CD9-207ENST00000538418 COPS2P61201 443 aa13.28□□□□□ -0.28
CD9-207ENST00000538418 FMR1Q06787 632 aaKnown RBP eCLIP13.28□□□□□ -0.28
CD9-207ENST00000538418 LDLRAD1Q5T700 205 aa13.28□□□□□ -0.28
CD9-207ENST00000538418 C9orf131Q5VYM1 1079 aa13.28□□□□□ -0.28
CD9-207ENST00000538418 HRO43593 1189 aa13.27□□□□□ -0.29
CD9-207ENST00000538418 MPSTP25325 297 aa13.27□□□□□ -0.29
CD9-207ENST00000538418 PIK3R5Q8WYR1 880 aa13.27□□□□□ -0.29
CD9-207ENST00000538418 BRPF3Q9ULD4 1205 aa13.27□□□□□ -0.29
CD9-207ENST00000538418 FGD1P98174 961 aa13.26□□□□□ -0.29
CD9-207ENST00000538418 XPCQ01831 940 aaPredicted RBP13.26□□□□□ -0.29
CD9-207ENST00000538418 ZNF511Q8NB15 262 aa13.26□□□□□ -0.29
CD9-207ENST00000538418 CDV3Q9UKY7 258 aaKnown RBP13.26□□□□□ -0.29
CD9-207ENST00000538418 ADH1BP00325 375 aa13.25□□□□□ -0.29
CD9-207ENST00000538418 CITED4Q96RK1 184 aa13.25□□□□□ -0.29
CD9-207ENST00000538418 C1QTNF2Q9BXJ5 285 aa13.25□□□□□ -0.29
CD9-207ENST00000538418 RAD51AP2Q09MP3 1159 aa13.24□□□□□ -0.29
CD9-207ENST00000538418 LINC01559Q495D7 138 aa13.24□□□□□ -0.29
CD9-207ENST00000538418 TMEM87AQ8NBN3 555 aa13.24□□□□□ -0.29
CD9-207ENST00000538418 TMC1Q8TDI8 760 aa13.24□□□□□ -0.29
CD9-207ENST00000538418 SCG3Q8WXD2 468 aaKnown RBP13.24□□□□□ -0.29
CD9-207ENST00000538418 STAC3Q96MF2 364 aa13.24□□□□□ -0.29
CD9-207ENST00000538418 TMEM229AB2RXF0 380 aa13.23□□□□□ -0.29
CD9-207ENST00000538418 VTI1AQ96AJ9 217 aa13.23□□□□□ -0.29
CD9-207ENST00000538418 PARP2Q9UGN5 583 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms