RNA–Protein interactions for RNA: ENST00000538258.1

PGA3-204, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2 BASIC

Gene PGA3, Length 867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-204ENST00000538258 ZCRB1Q8TBF4 217 aaKnown RBP12.25□□□□□ -0.45
PGA3-204ENST00000538258 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
PGA3-204ENST00000538258 NCAPD2Q15021 1401 aa12.25□□□□□ -0.45
PGA3-204ENST00000538258 PPP2R1AP30153 589 aa12.24□□□□□ -0.45
PGA3-204ENST00000538258 IL13P35225 146 aa12.24□□□□□ -0.45
PGA3-204ENST00000538258 IGSF1Q8N6C5 1336 aa12.24□□□□□ -0.45
PGA3-204ENST00000538258 SHANK3Q9BYB0 1731 aa12.24□□□□□ -0.45
PGA3-204ENST00000538258 TNS1Q9HBL0 1735 aaKnown RBP12.24□□□□□ -0.45
PGA3-204ENST00000538258 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
PGA3-204ENST00000538258 BCL9O00512 1426 aa12.22□□□□□ -0.45
PGA3-204ENST00000538258 PARD3Q8TEW0 1356 aa12.22□□□□□ -0.45
PGA3-204ENST00000538258 BAG6P46379 1132 aa12.22□□□□□ -0.45
PGA3-204ENST00000538258 CFAP53Q96M91 514 aa12.22□□□□□ -0.45
PGA3-204ENST00000538258 PKD1L3Q7Z443 1732 aa12.22□□□□□ -0.45
PGA3-204ENST00000538258 PCDH11XQ9BZA7 1347 aa12.21□□□□□ -0.45
PGA3-204ENST00000538258 PCDH11YQ9BZA8 1340 aa12.21□□□□□ -0.45
PGA3-204ENST00000538258 APBA3O96018 575 aa12.21□□□□□ -0.45
PGA3-204ENST00000538258 SULT6B1Q6IMI4 303 aa12.21□□□□□ -0.45
PGA3-204ENST00000538258 SPG7Q9UQ90 795 aa12.21□□□□□ -0.45
PGA3-204ENST00000538258 COL3A1P02461 1466 aaPredicted RBP12.21□□□□□ -0.46
PGA3-204ENST00000538258 RALBP1Q15311 655 aa12.2□□□□□ -0.46
PGA3-204ENST00000538258 AEBP1Q8IUX7 1158 aa12.2□□□□□ -0.46
PGA3-204ENST00000538258 ACSBG1Q96GR2 724 aa12.2□□□□□ -0.46
PGA3-204ENST00000538258 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
PGA3-204ENST00000538258 NHSQ6T4R5 1651 aa12.19□□□□□ -0.46
PGA3-204ENST00000538258 U2SURPO15042 1029 aaKnown RBP12.19□□□□□ -0.46
PGA3-204ENST00000538258 EN1Q05925 392 aaPredicted RBP12.19□□□□□ -0.46
PGA3-204ENST00000538258 PTF1AQ7RTS3 328 aa12.19□□□□□ -0.46
PGA3-204ENST00000538258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.46
PGA3-204ENST00000538258 DOT1LQ8TEK3 1739 aa12.19□□□□□ -0.46
PGA3-204ENST00000538258 CYP27B1O15528 508 aa12.18□□□□□ -0.46
PGA3-204ENST00000538258 KCNQ2O43526 872 aa12.18□□□□□ -0.46
PGA3-204ENST00000538258 HMOX1P09601 288 aa12.18□□□□□ -0.46
PGA3-204ENST00000538258 PLEKHO1Q53GL0 409 aaPredicted RBP12.18□□□□□ -0.46
PGA3-204ENST00000538258 KDRP35968 1356 aa12.18□□□□□ -0.46
PGA3-204ENST00000538258 PLEKHG2Q9H7P9 1386 aa12.18□□□□□ -0.46
PGA3-204ENST00000538258 BTAF1O14981 1849 aa12.17□□□□□ -0.46
PGA3-204ENST00000538258 R3HDM1Q15032 1099 aaKnown RBP12.17□□□□□ -0.46
PGA3-204ENST00000538258 NUDCQ9Y266 331 aa12.17□□□□□ -0.46
PGA3-204ENST00000538258 EZH2Q15910 746 aaKnown RBP12.16□□□□□ -0.46
PGA3-204ENST00000538258 AMOTQ4VCS5 1084 aa12.16□□□□□ -0.46
PGA3-204ENST00000538258 IFNL2Q8IZJ0 200 aa12.16□□□□□ -0.46
PGA3-204ENST00000538258 SYTL4Q96C24 671 aaPredicted RBP12.16□□□□□ -0.46
PGA3-204ENST00000538258 CAMKK2Q96RR4 588 aa12.16□□□□□ -0.46
PGA3-204ENST00000538258 PHKG2P15735 406 aa12.15□□□□□ -0.46
PGA3-204ENST00000538258 PRIM1P49642 420 aaKnown RBP12.15□□□□□ -0.46
PGA3-204ENST00000538258 ZNF530Q6P9A1 599 aaPredicted RBP12.15□□□□□ -0.46
PGA3-204ENST00000538258 RGPD3A6NKT7 1758 aaPredicted RBP12.15□□□□□ -0.46
PGA3-204ENST00000538258 RGPD4Q7Z3J3 1758 aa12.15□□□□□ -0.46
PGA3-204ENST00000538258 MYBBP1AQ9BQG0 1328 aaKnown RBP12.14□□□□□ -0.47
PGA3-204ENST00000538258 ITGB4P16144 1822 aa12.14□□□□□ -0.47
PGA3-204ENST00000538258 PLSCR1O15162 318 aa12.14□□□□□ -0.47
PGA3-204ENST00000538258 U2AF1L5P0DN76 240 aaPredicted RBP12.14□□□□□ -0.47
PGA3-204ENST00000538258 U2AF1Q01081 240 aaKnown RBP eCLIP12.14□□□□□ -0.47
PGA3-204ENST00000538258 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
PGA3-204ENST00000538258 C1orf141Q5JVX7 400 aa12.14□□□□□ -0.47
PGA3-204ENST00000538258 TOGARAM1Q9Y4F4 1720 aa12.14□□□□□ -0.47
PGA3-204ENST00000538258 RREB1Q92766 1687 aa12.13□□□□□ -0.47
PGA3-204ENST00000538258 IFFO2Q5TF58 517 aa12.13□□□□□ -0.47
PGA3-204ENST00000538258 PRKRIP1Q9H875 184 aaPredicted RBP12.13□□□□□ -0.47
PGA3-204ENST00000538258 HSP90AB1P08238 724 aaKnown RBP12.12□□□□□ -0.47
PGA3-204ENST00000538258 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
PGA3-204ENST00000538258 PRKAR2BP31323 418 aa12.11□□□□□ -0.47
PGA3-204ENST00000538258 MPRIPQ6WCQ1 1025 aa12.11□□□□□ -0.47
PGA3-204ENST00000538258 VIRMAQ69YN4 1812 aaKnown RBP12.1□□□□□ -0.47
PGA3-204ENST00000538258 DCAF8L1A6NGE4 600 aa12.1□□□□□ -0.47
PGA3-204ENST00000538258 MTHFSDQ2M296 383 aaKnown RBP12.1□□□□□ -0.47
PGA3-204ENST00000538258 DCAF5Q96JK2 942 aa12.1□□□□□ -0.47
PGA3-204ENST00000538258 RSPH6AQ9H0K4 717 aa12.1□□□□□ -0.47
PGA3-204ENST00000538258 FCHSD2O94868 740 aa12.09□□□□□ -0.47
PGA3-204ENST00000538258 TXNRD1Q16881 649 aa12.09□□□□□ -0.47
PGA3-204ENST00000538258 AKAP4Q5JQC9 854 aa12.09□□□□□ -0.47
PGA3-204ENST00000538258 TMOD3Q9NYL9 352 aa12.09□□□□□ -0.47
PGA3-204ENST00000538258 SCN11AQ9UI33 1791 aa12.09□□□□□ -0.47
PGA3-204ENST00000538258 KDM6AO15550 1401 aaPredicted RBP12.09□□□□□ -0.47
PGA3-204ENST00000538258 ERVV-2B6SEH9 535 aa12.08□□□□□ -0.48
PGA3-204ENST00000538258 NBPF14Q5TI25 921 aa12.08□□□□□ -0.48
PGA3-204ENST00000538258 PROM2Q8N271 834 aa12.08□□□□□ -0.48
PGA3-204ENST00000538258 GAS2L2Q8NHY3 880 aa12.08□□□□□ -0.48
PGA3-204ENST00000538258 PIGBQ92521 554 aa12.08□□□□□ -0.48
PGA3-204ENST00000538258 LY75O60449 1722 aa12.08□□□□□ -0.48
PGA3-204ENST00000538258 SENP3-EIF4A1A0A087X0R7 540 aa12.07□□□□□ -0.48
PGA3-204ENST00000538258 ANP32CO43423 234 aa12.07□□□□□ -0.48
PGA3-204ENST00000538258 NEFMP07197 916 aa12.07□□□□□ -0.48
PGA3-204ENST00000538258 CABP4P57796 275 aa12.07□□□□□ -0.48
PGA3-204ENST00000538258 PHACTR3Q96KR7 559 aa12.07□□□□□ -0.48
PGA3-204ENST00000538258 RNMTO43148 476 aaKnown RBP12.06□□□□□ -0.48
PGA3-204ENST00000538258 SLC27A3Q5K4L6 730 aa12.06□□□□□ -0.48
PGA3-204ENST00000538258 SMARCC1Q92922 1105 aaPredicted RBP12.06□□□□□ -0.48
PGA3-204ENST00000538258 PALLDQ8WX93 1383 aa12.05□□□□□ -0.48
PGA3-204ENST00000538258 MAP3K5Q99683 1374 aa12.05□□□□□ -0.48
PGA3-204ENST00000538258 GNAT3A8MTJ3 354 aa12.05□□□□□ -0.48
PGA3-204ENST00000538258 WDR43Q15061 677 aaKnown RBP eCLIP12.05□□□□□ -0.48
PGA3-204ENST00000538258 PNNQ9H307 717 aaKnown RBP12.05□□□□□ -0.48
PGA3-204ENST00000538258 LGR6Q9HBX8 967 aa12.05□□□□□ -0.48
PGA3-204ENST00000538258 PPP1R1BQ9UD71 204 aaPredicted RBP12.05□□□□□ -0.48
PGA3-204ENST00000538258 CCNL1Q9UK58 526 aaPredicted RBP12.05□□□□□ -0.48
PGA3-204ENST00000538258 ADAMTS7Q9UKP4 1686 aa12.04□□□□□ -0.48
PGA3-204ENST00000538258 KCNQ4P56696 695 aa12.04□□□□□ -0.48
PGA3-204ENST00000538258 NFATC2IPQ8NCF5 419 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms