RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 PARP4Q9UKK3 1724 aaKnown RBP32.14■■■□□ 2.74
HMGA2-208ENST00000537429 CDCA7Q9BWT1 371 aaPredicted RBP32.13■■■□□ 2.73
HMGA2-208ENST00000537429 OVOS2A0A0G2JMS6 1433 aa32.13■■■□□ 2.73
HMGA2-208ENST00000537429 NEFMP07197 916 aa32.11■■■□□ 2.73
HMGA2-208ENST00000537429 FAM98CQ17RN3 349 aaKnown RBP32.11■■■□□ 2.73
HMGA2-208ENST00000537429 MAPK8IP3Q9UPT6 1336 aa32.11■■■□□ 2.73
HMGA2-208ENST00000537429 A0A0G2JS52 829 aa32.1■■■□□ 2.73
HMGA2-208ENST00000537429 MYT1Q01538 1121 aa32.1■■■□□ 2.73
HMGA2-208ENST00000537429 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.1■■■□□ 2.73
HMGA2-208ENST00000537429 ONECUT3O60422 494 aaPredicted RBP32.09■■■□□ 2.73
HMGA2-208ENST00000537429 AMOTQ4VCS5 1084 aa32.09■■■□□ 2.73
HMGA2-208ENST00000537429 RBM6P78332 1123 aaKnown RBP32.08■■■□□ 2.73
HMGA2-208ENST00000537429 PLEKHO1Q53GL0 409 aaPredicted RBP32.08■■■□□ 2.73
HMGA2-208ENST00000537429 PKD1L3Q7Z443 1732 aa32.08■■■□□ 2.73
HMGA2-208ENST00000537429 MTHFSDQ2M296 383 aaKnown RBP32.07■■■□□ 2.72
HMGA2-208ENST00000537429 POTEAQ6S8J7 498 aa32.07■■■□□ 2.72
HMGA2-208ENST00000537429 THSD7AQ9UPZ6 1657 aa32.06■■■□□ 2.72
HMGA2-208ENST00000537429 APAF1O14727 1248 aa32.05■■■□□ 2.72
HMGA2-208ENST00000537429 RXRBP28702 533 aa32.05■■■□□ 2.72
HMGA2-208ENST00000537429 ZCRB1Q8TBF4 217 aaKnown RBP32.05■■■□□ 2.72
HMGA2-208ENST00000537429 SPG7Q9UQ90 795 aa32.05■■■□□ 2.72
HMGA2-208ENST00000537429 GAS2L2Q8NHY3 880 aa32.04■■■□□ 2.72
HMGA2-208ENST00000537429 EXOC5O00471 708 aa32.02■■■□□ 2.72
HMGA2-208ENST00000537429 TMPOP42166 694 aaKnown RBP32.02■■■□□ 2.72
HMGA2-208ENST00000537429 NFE2L2Q16236 605 aa32.02■■■□□ 2.72
HMGA2-208ENST00000537429 LRRC37A3O60309 1634 aa32.02■■■□□ 2.72
HMGA2-208ENST00000537429 DDB1Q16531 1140 aa32.01■■■□□ 2.72
HMGA2-208ENST00000537429 SHANK3Q9BYB0 1731 aa32.01■■■□□ 2.71
HMGA2-208ENST00000537429 TNS2Q63HR2 1409 aa32.01■■■□□ 2.71
HMGA2-208ENST00000537429 ZNF530Q6P9A1 599 aaPredicted RBP31.99■■■□□ 2.71
HMGA2-208ENST00000537429 PCDH11XQ9BZA7 1347 aa31.98■■■□□ 2.71
HMGA2-208ENST00000537429 PCDH11YQ9BZA8 1340 aa31.98■■■□□ 2.71
HMGA2-208ENST00000537429 RRP7AQ9Y3A4 280 aaKnown RBP31.98■■■□□ 2.71
HMGA2-208ENST00000537429 CYP27B1O15528 508 aa31.97■■■□□ 2.71
HMGA2-208ENST00000537429 SEPT12Q8IYM1 358 aa31.97■■■□□ 2.71
HMGA2-208ENST00000537429 SENP3-EIF4A1A0A087X0R7 540 aa31.96■■■□□ 2.71
HMGA2-208ENST00000537429 DLG5Q8TDM6 1919 aa31.96■■■□□ 2.71
HMGA2-208ENST00000537429 PHKG2P15735 406 aa31.95■■■□□ 2.71
HMGA2-208ENST00000537429 RIPK4P57078 832 aa31.95■■■□□ 2.71
HMGA2-208ENST00000537429 NEUROD2Q15784 382 aa31.95■■■□□ 2.71
HMGA2-208ENST00000537429 AKAP4Q5JQC9 854 aa31.95■■■□□ 2.71
HMGA2-208ENST00000537429 IFNL2Q8IZJ0 200 aa31.95■■■□□ 2.71
HMGA2-208ENST00000537429 NCBP3Q53F19 620 aaKnown RBP31.94■■■□□ 2.7
HMGA2-208ENST00000537429 C1orf141Q5JVX7 400 aa31.94■■■□□ 2.7
HMGA2-208ENST00000537429 DDX54Q8TDD1 881 aaKnown RBP31.94■■■□□ 2.7
HMGA2-208ENST00000537429 GNAT3A8MTJ3 354 aa31.92■■■□□ 2.7
HMGA2-208ENST00000537429 MAP3K5Q99683 1374 aa31.92■■■□□ 2.7
HMGA2-208ENST00000537429 NGEFQ8N5V2 710 aa31.91■■■□□ 2.7
HMGA2-208ENST00000537429 HNRNPUQ00839 825 aaKnown RBP eCLIP31.9■■■□□ 2.76e-6■□□□□ 8.3
HMGA2-208ENST00000537429 PDE3BQ13370 1112 aa31.9■■■□□ 2.7
HMGA2-208ENST00000537429 TRIM35Q9UPQ4 493 aa31.9■■■□□ 2.7
HMGA2-208ENST00000537429 HTATSF1O43719 755 aaKnown RBP31.9■■■□□ 2.7
HMGA2-208ENST00000537429 NKX1-1Q15270 411 aaPredicted RBP31.89■■■□□ 2.7
HMGA2-208ENST00000537429 CCDC27Q2M243 656 aa31.89■■■□□ 2.7
HMGA2-208ENST00000537429 MARCH10Q8NA82 808 aaPredicted RBP31.89■■■□□ 2.7
HMGA2-208ENST00000537429 SALL2Q9Y467 1007 aaPredicted RBP31.89■■■□□ 2.7
HMGA2-208ENST00000537429 RGS12O14924 1447 aa31.87■■■□□ 2.69
HMGA2-208ENST00000537429 LMOD3Q0VAK6 560 aa31.87■■■□□ 2.69
HMGA2-208ENST00000537429 BRWD3Q6RI45 1802 aa31.86■■■□□ 2.69
HMGA2-208ENST00000537429 HSP90AB1P08238 724 aaKnown RBP31.86■■■□□ 2.69
HMGA2-208ENST00000537429 RTF1Q92541 710 aaKnown RBP31.85■■■□□ 2.69
HMGA2-208ENST00000537429 ADAMTS7Q9UKP4 1686 aa31.85■■■□□ 2.69
HMGA2-208ENST00000537429 MPRIPQ6WCQ1 1025 aa31.85■■■□□ 2.69
HMGA2-208ENST00000537429 IL17REQ8NFR9 667 aa31.85■■■□□ 2.69
HMGA2-208ENST00000537429 WWC1Q8IX03 1113 aa31.84■■■□□ 2.69
HMGA2-208ENST00000537429 DCAF5Q96JK2 942 aa31.84■■■□□ 2.69
HMGA2-208ENST00000537429 KDM6AO15550 1401 aaPredicted RBP31.83■■■□□ 2.69
HMGA2-208ENST00000537429 DCTN1Q14203 1278 aa31.83■■■□□ 2.69
HMGA2-208ENST00000537429 LGR6Q9HBX8 967 aa31.83■■■□□ 2.69
HMGA2-208ENST00000537429 MCM10Q7L590 875 aa31.82■■■□□ 2.68
HMGA2-208ENST00000537429 RNMTO43148 476 aaKnown RBP31.81■■■□□ 2.68
HMGA2-208ENST00000537429 KRT27Q7Z3Y8 459 aa31.81■■■□□ 2.68
HMGA2-208ENST00000537429 SCN11AQ9UI33 1791 aa31.81■■■□□ 2.68
HMGA2-208ENST00000537429 VIRMAQ69YN4 1812 aaKnown RBP31.81■■■□□ 2.68
HMGA2-208ENST00000537429 CEMIPQ8WUJ3 1361 aa31.81■■■□□ 2.68
HMGA2-208ENST00000537429 YTHDC1Q96MU7 727 aaKnown RBP31.8■■■□□ 2.68
HMGA2-208ENST00000537429 ZNF521Q96K83 1311 aa31.79■■■□□ 2.68
HMGA2-208ENST00000537429 THUMPD2Q9BTF0 503 aaKnown RBP31.79■■■□□ 2.68
HMGA2-208ENST00000537429 FAM182BQ5T319 152 aa31.77■■■□□ 2.68
HMGA2-208ENST00000537429 BCL9O00512 1426 aa31.76■■■□□ 2.68
HMGA2-208ENST00000537429 ZBED9Q6R2W3 1325 aa31.76■■■□□ 2.68
HMGA2-208ENST00000537429 TOGARAM1Q9Y4F4 1720 aa31.76■■■□□ 2.67
HMGA2-208ENST00000537429 ERVV-2B6SEH9 535 aa31.74■■■□□ 2.67
HMGA2-208ENST00000537429 WDR63Q8IWG1 891 aa31.74■■■□□ 2.67
HMGA2-208ENST00000537429 MRC1P22897 1456 aa31.72■■■□□ 2.67
HMGA2-208ENST00000537429 DOT1LQ8TEK3 1739 aa31.71■■■□□ 2.67
HMGA2-208ENST00000537429 TEFQ10587 303 aa31.71■■■□□ 2.67
HMGA2-208ENST00000537429 SLC52A2Q9HAB3 445 aa31.71■■■□□ 2.67
HMGA2-208ENST00000537429 CALD1Q05682 793 aaKnown RBP31.7■■■□□ 2.67
HMGA2-208ENST00000537429 CABP4P57796 275 aa31.69■■■□□ 2.66
HMGA2-208ENST00000537429 FAM196AQ6ZSG2 479 aa31.69■■■□□ 2.66
HMGA2-208ENST00000537429 NFATC2IPQ8NCF5 419 aa31.69■■■□□ 2.66
HMGA2-208ENST00000537429 SIPA1L3O60292 1781 aaPredicted RBP31.69■■■□□ 2.66
HMGA2-208ENST00000537429 IL16Q14005 1332 aa31.68■■■□□ 2.66
HMGA2-208ENST00000537429 EP400Q96L91 3159 aa31.68■■■□□ 2.66
HMGA2-208ENST00000537429 ITGB4P16144 1822 aa31.68■■■□□ 2.66
HMGA2-208ENST00000537429 PRIM1P49642 420 aaKnown RBP31.67■■■□□ 2.66
HMGA2-208ENST00000537429 ACSBG1Q96GR2 724 aa31.67■■■□□ 2.66
HMGA2-208ENST00000537429 GOLGA2Q08379 1002 aa31.66■■■□□ 2.66
HMGA2-208ENST00000537429 TAF7Q15545 349 aaPredicted RBP31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms