RNA–Protein interactions for RNA: ENST00000536996.5

SPPL3-204, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-204ENST00000536996 ANP32CO43423 234 aa19.37■□□□□ 0.69
SPPL3-204ENST00000536996 TATP17735 454 aaPredicted RBP19.37■□□□□ 0.69
SPPL3-204ENST00000536996 PDE3BQ13370 1112 aa19.37■□□□□ 0.69
SPPL3-204ENST00000536996 NUDCQ9Y266 331 aa19.37■□□□□ 0.69
SPPL3-204ENST00000536996 DOT1LQ8TEK3 1739 aa19.37■□□□□ 0.69
SPPL3-204ENST00000536996 TNS1Q9HBL0 1735 aaKnown RBP19.37■□□□□ 0.69
SPPL3-204ENST00000536996 DLG5Q8TDM6 1919 aa19.36■□□□□ 0.69
SPPL3-204ENST00000536996 NHSQ6T4R5 1651 aa19.36■□□□□ 0.69
SPPL3-204ENST00000536996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.35■□□□□ 0.69
SPPL3-204ENST00000536996 BCL9O00512 1426 aa19.34■□□□□ 0.69
SPPL3-204ENST00000536996 SCN11AQ9UI33 1791 aa19.34■□□□□ 0.69
SPPL3-204ENST00000536996 EP400Q96L91 3159 aa19.34■□□□□ 0.69
SPPL3-204ENST00000536996 SULT6B1Q6IMI4 303 aa19.34■□□□□ 0.69
SPPL3-204ENST00000536996 ZCRB1Q8TBF4 217 aaKnown RBP19.33■□□□□ 0.68
SPPL3-204ENST00000536996 TOGARAM1Q9Y4F4 1720 aa19.32■□□□□ 0.68
SPPL3-204ENST00000536996 U2SURPO15042 1029 aaKnown RBP19.32■□□□□ 0.68
SPPL3-204ENST00000536996 AEBP1Q8IUX7 1158 aa19.32■□□□□ 0.68
SPPL3-204ENST00000536996 PCDH11XQ9BZA7 1347 aa19.31■□□□□ 0.68
SPPL3-204ENST00000536996 PCDH11YQ9BZA8 1340 aa19.31■□□□□ 0.68
SPPL3-204ENST00000536996 MARCH10Q8NA82 808 aaPredicted RBP19.31■□□□□ 0.68
SPPL3-204ENST00000536996 BTAF1O14981 1849 aa19.3■□□□□ 0.68
SPPL3-204ENST00000536996 RGPD3A6NKT7 1758 aaPredicted RBP19.3■□□□□ 0.68
SPPL3-204ENST00000536996 RGPD4Q7Z3J3 1758 aa19.3■□□□□ 0.68
SPPL3-204ENST00000536996 FAM196AQ6ZSG2 479 aa19.3■□□□□ 0.68
SPPL3-204ENST00000536996 SPG7Q9UQ90 795 aa19.3■□□□□ 0.68
SPPL3-204ENST00000536996 HMOX1P09601 288 aa19.29■□□□□ 0.68
SPPL3-204ENST00000536996 AMOTQ4VCS5 1084 aa19.29■□□□□ 0.68
SPPL3-204ENST00000536996 ADAMTS7Q9UKP4 1686 aa19.29■□□□□ 0.68
SPPL3-204ENST00000536996 U2AF1L5P0DN76 240 aaPredicted RBP19.28■□□□□ 0.68
SPPL3-204ENST00000536996 U2AF1Q01081 240 aaKnown RBP eCLIP19.28■□□□□ 0.68
SPPL3-204ENST00000536996 FCHSD2O94868 740 aa19.27■□□□□ 0.68
SPPL3-204ENST00000536996 PLEKHO1Q53GL0 409 aaPredicted RBP19.27■□□□□ 0.68
SPPL3-204ENST00000536996 FAM182BQ5T319 152 aa19.27■□□□□ 0.68
SPPL3-204ENST00000536996 DDX54Q8TDD1 881 aaKnown RBP19.26■□□□□ 0.67
SPPL3-204ENST00000536996 RSPH6AQ9H0K4 717 aa19.26■□□□□ 0.67
SPPL3-204ENST00000536996 CYP27B1O15528 508 aa19.24■□□□□ 0.67
SPPL3-204ENST00000536996 CCDC125Q86Z20 511 aa19.24■□□□□ 0.67
SPPL3-204ENST00000536996 SIPA1L3O60292 1781 aaPredicted RBP19.24■□□□□ 0.67
SPPL3-204ENST00000536996 SOCS7O14512 581 aa19.23■□□□□ 0.67
SPPL3-204ENST00000536996 PRKAR2BP31323 418 aa19.23■□□□□ 0.67
SPPL3-204ENST00000536996 DIEXFQ68CQ4 756 aaKnown RBP19.23■□□□□ 0.67
SPPL3-204ENST00000536996 IFNL2Q8IZJ0 200 aa19.23■□□□□ 0.67
SPPL3-204ENST00000536996 PNNQ9H307 717 aaKnown RBP19.23■□□□□ 0.67
SPPL3-204ENST00000536996 LY75O60449 1722 aa19.22■□□□□ 0.67
SPPL3-204ENST00000536996 PHKG2P15735 406 aa19.22■□□□□ 0.67
SPPL3-204ENST00000536996 NKX1-1Q15270 411 aaPredicted RBP19.22■□□□□ 0.67
SPPL3-204ENST00000536996 UPF1Q92900 1129 aaKnown RBP eCLIP19.22■□□□□ 0.67
SPPL3-204ENST00000536996 WDR43Q15061 677 aaKnown RBP eCLIP19.21■□□□□ 0.67
SPPL3-204ENST00000536996 ZNF530Q6P9A1 599 aaPredicted RBP19.21■□□□□ 0.67
SPPL3-204ENST00000536996 RREB1Q92766 1687 aa19.2■□□□□ 0.66
SPPL3-204ENST00000536996 HSP90AB1P08238 724 aaKnown RBP19.2■□□□□ 0.66
SPPL3-204ENST00000536996 CCDC184Q52MB2 194 aa19.2■□□□□ 0.66
SPPL3-204ENST00000536996 C1orf141Q5JVX7 400 aa19.19■□□□□ 0.66
SPPL3-204ENST00000536996 GAS2L2Q8NHY3 880 aa19.19■□□□□ 0.66
SPPL3-204ENST00000536996 PLEKHF1Q96S99 279 aa19.19■□□□□ 0.66
SPPL3-204ENST00000536996 MRS2Q9HD23 443 aa19.19■□□□□ 0.66
SPPL3-204ENST00000536996 TRIM37O94972 964 aa19.18■□□□□ 0.66
SPPL3-204ENST00000536996 NEFMP07197 916 aa19.18■□□□□ 0.66
SPPL3-204ENST00000536996 MTHFSDQ2M296 383 aaKnown RBP19.18■□□□□ 0.66
SPPL3-204ENST00000536996 AKAP4Q5JQC9 854 aa19.18■□□□□ 0.66
SPPL3-204ENST00000536996 BCL11BQ9C0K0 894 aaPredicted RBP19.18■□□□□ 0.66
SPPL3-204ENST00000536996 DCAF5Q96JK2 942 aa19.17■□□□□ 0.66
SPPL3-204ENST00000536996 PHACTR3Q96KR7 559 aa19.17■□□□□ 0.66
SPPL3-204ENST00000536996 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
SPPL3-204ENST00000536996 MRC1P22897 1456 aa19.16■□□□□ 0.66
SPPL3-204ENST00000536996 PAPPAQ13219 1627 aa19.16■□□□□ 0.66
SPPL3-204ENST00000536996 SF3B2Q13435 895 aaKnown RBP19.16■□□□□ 0.66
SPPL3-204ENST00000536996 MAP3K5Q99683 1374 aa19.16■□□□□ 0.66
SPPL3-204ENST00000536996 PNISRQ8TF01 805 aaKnown RBP19.15■□□□□ 0.66
SPPL3-204ENST00000536996 ADAMTS8Q9UP79 889 aa19.15■□□□□ 0.66
SPPL3-204ENST00000536996 TAF1LQ8IZX4 1826 aa19.15■□□□□ 0.66
SPPL3-204ENST00000536996 ZNF831Q5JPB2 1677 aa19.14■□□□□ 0.66
SPPL3-204ENST00000536996 NUP188Q5SRE5 1749 aa19.14■□□□□ 0.66
SPPL3-204ENST00000536996 CCER2I3L3R5 266 aa19.14■□□□□ 0.65
SPPL3-204ENST00000536996 ACSBG1Q96GR2 724 aa19.14■□□□□ 0.65
SPPL3-204ENST00000536996 MAPK8IP3Q9UPT6 1336 aa19.14■□□□□ 0.65
SPPL3-204ENST00000536996 KCNQ2O43526 872 aa19.13■□□□□ 0.65
SPPL3-204ENST00000536996 PRIM1P49642 420 aaKnown RBP19.13■□□□□ 0.65
SPPL3-204ENST00000536996 UBR2Q8IWV8 1755 aa19.13■□□□□ 0.65
SPPL3-204ENST00000536996 GNAT3A8MTJ3 354 aa19.12■□□□□ 0.65
SPPL3-204ENST00000536996 ERVV-2B6SEH9 535 aa19.12■□□□□ 0.65
SPPL3-204ENST00000536996 RUNDC1Q96C34 613 aa19.12■□□□□ 0.65
SPPL3-204ENST00000536996 BAG6P46379 1132 aa19.11■□□□□ 0.65
SPPL3-204ENST00000536996 PLSCR1O15162 318 aa19.1■□□□□ 0.65
SPPL3-204ENST00000536996 HTATSF1O43719 755 aaKnown RBP19.1■□□□□ 0.65
SPPL3-204ENST00000536996 APBA3O96018 575 aa19.1■□□□□ 0.65
SPPL3-204ENST00000536996 MPRIPQ6WCQ1 1025 aa19.1■□□□□ 0.65
SPPL3-204ENST00000536996 PTF1AQ7RTS3 328 aa19.1■□□□□ 0.65
SPPL3-204ENST00000536996 SYTL4Q96C24 671 aaPredicted RBP19.1■□□□□ 0.65
SPPL3-204ENST00000536996 CEMIPQ8WUJ3 1361 aa19.09■□□□□ 0.65
SPPL3-204ENST00000536996 C5P01031 1676 aa19.09■□□□□ 0.65
SPPL3-204ENST00000536996 RNMTO43148 476 aaKnown RBP19.09■□□□□ 0.65
SPPL3-204ENST00000536996 NFE2L2Q16236 605 aa19.09■□□□□ 0.65
SPPL3-204ENST00000536996 CICQ96RK0 1608 aaPredicted RBP19.09■□□□□ 0.65
SPPL3-204ENST00000536996 KDM3BQ7LBC6 1761 aa19.09■□□□□ 0.65
SPPL3-204ENST00000536996 TMOD3Q9NYL9 352 aa19.08■□□□□ 0.64
SPPL3-204ENST00000536996 COL5A3P25940 1745 aaPredicted RBP19.06■□□□□ 0.64
SPPL3-204ENST00000536996 TMPOP42166 694 aaKnown RBP19.06■□□□□ 0.64
SPPL3-204ENST00000536996 CABP4P57796 275 aa19.06■□□□□ 0.64
SPPL3-204ENST00000536996 CCDC146Q8IYE0 955 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 251.4 ms