RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 FAM9AQ8IZU1 332 aaPredicted RBP11.35□□□□□ -0.59
CCDC60-203ENST00000536742 TSC1Q92574 1164 aa11.35□□□□□ -0.59
CCDC60-203ENST00000536742 PKD2L1Q9P0L9 805 aa11.35□□□□□ -0.59
CCDC60-203ENST00000536742 TCOF1Q13428 1488 aaKnown RBP11.35□□□□□ -0.59
CCDC60-203ENST00000536742 RAPGEF2Q9Y4G8 1499 aa11.35□□□□□ -0.59
CCDC60-203ENST00000536742 HECW1Q76N89 1606 aa11.35□□□□□ -0.59
CCDC60-203ENST00000536742 SHANK2Q9UPX8 1470 aa11.34□□□□□ -0.59
CCDC60-203ENST00000536742 TRIM32Q13049 653 aa11.34□□□□□ -0.59
CCDC60-203ENST00000536742 CYP4X1Q8N118 509 aa11.34□□□□□ -0.59
CCDC60-203ENST00000536742 UBTFP17480 764 aaKnown RBP11.33□□□□□ -0.6
CCDC60-203ENST00000536742 MTMR14Q8NCE2 650 aa11.33□□□□□ -0.6
CCDC60-203ENST00000536742 PNMA1Q8ND90 353 aa11.33□□□□□ -0.6
CCDC60-203ENST00000536742 SNRKQ9NRH2 765 aa11.32□□□□□ -0.6
CCDC60-203ENST00000536742 NPATQ14207 1427 aa11.32□□□□□ -0.6
CCDC60-203ENST00000536742 ATP10BO94823 1461 aa11.32□□□□□ -0.6
CCDC60-203ENST00000536742 RAD21O60216 631 aa11.31□□□□□ -0.6
CCDC60-203ENST00000536742 TTC24A2A3L6 582 aaPredicted RBP11.3□□□□□ -0.6
CCDC60-203ENST00000536742 NUDT12Q9BQG2 462 aa11.3□□□□□ -0.6
CCDC60-203ENST00000536742 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
CCDC60-203ENST00000536742 CNTLNQ9NXG0 1405 aa11.29□□□□□ -0.6
CCDC60-203ENST00000536742 A6NJR5 290 aa11.29□□□□□ -0.6
CCDC60-203ENST00000536742 CCNYL3P0C7X3 344 aa11.29□□□□□ -0.6
CCDC60-203ENST00000536742 MYT1Q01538 1121 aa11.29□□□□□ -0.6
CCDC60-203ENST00000536742 TIMELESSQ9UNS1 1208 aa11.29□□□□□ -0.6
CCDC60-203ENST00000536742 GOLGA3Q08378 1498 aa11.29□□□□□ -0.6
CCDC60-203ENST00000536742 WNT7AO00755 349 aa11.28□□□□□ -0.6
CCDC60-203ENST00000536742 TRIM52Q96A61 297 aa11.28□□□□□ -0.6
CCDC60-203ENST00000536742 ZMYND15Q9H091 742 aa11.28□□□□□ -0.6
CCDC60-203ENST00000536742 NDUFB9Q9Y6M9 179 aa11.28□□□□□ -0.6
CCDC60-203ENST00000536742 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.61
CCDC60-203ENST00000536742 ZNF787Q6DD87 383 aa11.27□□□□□ -0.61
CCDC60-203ENST00000536742 LRRN4Q8WUT4 740 aa11.27□□□□□ -0.61
CCDC60-203ENST00000536742 EVA1BQ9NVM1 165 aa11.27□□□□□ -0.61
CCDC60-203ENST00000536742 ARID3CA6NKF2 412 aa11.26□□□□□ -0.61
CCDC60-203ENST00000536742 F12P00748 615 aaPredicted RBP11.26□□□□□ -0.61
CCDC60-203ENST00000536742 WWC1Q8IX03 1113 aa11.26□□□□□ -0.61
CCDC60-203ENST00000536742 ARMC2Q8NEN0 867 aa11.26□□□□□ -0.61
CCDC60-203ENST00000536742 GJD4Q96KN9 370 aaPredicted RBP11.26□□□□□ -0.61
CCDC60-203ENST00000536742 TOR4AQ9NXH8 423 aa11.26□□□□□ -0.61
CCDC60-203ENST00000536742 ZC3H4Q9UPT8 1303 aaKnown RBP11.26□□□□□ -0.61
CCDC60-203ENST00000536742 AGLP35573 1532 aa11.25□□□□□ -0.61
CCDC60-203ENST00000536742 ZNF142P52746 1687 aaPredicted RBP11.25□□□□□ -0.61
CCDC60-203ENST00000536742 WNT7BP56706 349 aa11.25□□□□□ -0.61
CCDC60-203ENST00000536742 ZNF772Q68DY9 489 aaPredicted RBP11.25□□□□□ -0.61
CCDC60-203ENST00000536742 KCNH2Q12809 1159 aa11.24□□□□□ -0.61
CCDC60-203ENST00000536742 SNIP1Q8TAD8 396 aaKnown RBP11.24□□□□□ -0.61
CCDC60-203ENST00000536742 TRIM34Q9BYJ4 488 aa11.24□□□□□ -0.61
CCDC60-203ENST00000536742 HMX1Q9NP08 348 aaPredicted RBP11.24□□□□□ -0.61
CCDC60-203ENST00000536742 COG6Q9Y2V7 657 aa11.24□□□□□ -0.61
CCDC60-203ENST00000536742 RNF17Q9BXT8 1623 aaKnown RBP11.24□□□□□ -0.61
CCDC60-203ENST00000536742 GPKOWQ92917 476 aaPredicted RBP eCLIP11.23□□□□□ -0.61
CCDC60-203ENST00000536742 MRGPRX2Q96LB1 330 aa11.23□□□□□ -0.61
CCDC60-203ENST00000536742 SCAPERQ9BY12 1400 aa11.23□□□□□ -0.61
CCDC60-203ENST00000536742 LRRC7Q96NW7 1537 aa11.23□□□□□ -0.61
CCDC60-203ENST00000536742 RC3H1Q5TC82 1133 aaKnown RBP11.22□□□□□ -0.61
CCDC60-203ENST00000536742 REREQ9P2R6 1566 aa11.21□□□□□ -0.61
CCDC60-203ENST00000536742 CEP170BQ9Y4F5 1589 aaPredicted RBP11.21□□□□□ -0.61
CCDC60-203ENST00000536742 RXRBP28702 533 aa11.21□□□□□ -0.61
CCDC60-203ENST00000536742 CTHP32929 405 aa11.21□□□□□ -0.61
CCDC60-203ENST00000536742 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
CCDC60-203ENST00000536742 CDK12Q9NYV4 1490 aaPredicted RBP11.2□□□□□ -0.62
CCDC60-203ENST00000536742 NR6A1Q15406 480 aa11.2□□□□□ -0.62
CCDC60-203ENST00000536742 SETBP1Q9Y6X0 1596 aa11.2□□□□□ -0.62
CCDC60-203ENST00000536742 NBPF14Q5TI25 921 aa11.19□□□□□ -0.62
CCDC60-203ENST00000536742 PROSER2Q86WR7 435 aaPredicted RBP11.19□□□□□ -0.62
CCDC60-203ENST00000536742 MROH2AA6NES4 1674 aa11.19□□□□□ -0.62
CCDC60-203ENST00000536742 MYO3AQ8NEV4 1616 aa11.19□□□□□ -0.62
CCDC60-203ENST00000536742 VWDEQ8N2E2 1590 aa11.19□□□□□ -0.62
CCDC60-203ENST00000536742 FAM135BQ49AJ0 1406 aa11.18□□□□□ -0.62
CCDC60-203ENST00000536742 ZMYM3Q14202 1370 aa11.18□□□□□ -0.62
CCDC60-203ENST00000536742 ST8SIA5O15466 376 aa11.18□□□□□ -0.62
CCDC60-203ENST00000536742 SKOR1P84550 965 aa11.18□□□□□ -0.62
CCDC60-203ENST00000536742 GDPD2Q9HCC8 539 aa11.18□□□□□ -0.62
CCDC60-203ENST00000536742 AAASQ9NRG9 546 aa11.18□□□□□ -0.62
CCDC60-203ENST00000536742 FKBPLQ9UIM3 349 aa11.18□□□□□ -0.62
CCDC60-203ENST00000536742 POLR1AO95602 1720 aaPredicted RBP11.18□□□□□ -0.62
CCDC60-203ENST00000536742 AXIN1O15169 862 aa11.17□□□□□ -0.62
CCDC60-203ENST00000536742 AVPP01185 164 aa11.17□□□□□ -0.62
CCDC60-203ENST00000536742 WASHC4Q2M389 1173 aa11.17□□□□□ -0.62
CCDC60-203ENST00000536742 EHBP1Q8NDI1 1231 aa11.17□□□□□ -0.62
CCDC60-203ENST00000536742 CLUAP1Q96AJ1 413 aa11.17□□□□□ -0.62
CCDC60-203ENST00000536742 MAP10Q9P2G4 905 aa11.17□□□□□ -0.62
CCDC60-203ENST00000536742 TBC1D2BQ9UPU7 963 aa11.17□□□□□ -0.62
CCDC60-203ENST00000536742 GPSM3Q9Y4H4 160 aa11.17□□□□□ -0.62
CCDC60-203ENST00000536742 PLEKHD1A6NEE1 506 aa11.16□□□□□ -0.62
CCDC60-203ENST00000536742 CTC1Q2NKJ3 1217 aa11.16□□□□□ -0.62
CCDC60-203ENST00000536742 UNC93B1Q9H1C4 597 aa11.16□□□□□ -0.62
CCDC60-203ENST00000536742 SMPD1P17405 629 aa11.15□□□□□ -0.62
CCDC60-203ENST00000536742 CRIPAKQ8N1N5 446 aa11.15□□□□□ -0.62
CCDC60-203ENST00000536742 POM121Q96HA1 1249 aa11.15□□□□□ -0.62
CCDC60-203ENST00000536742 SYNMO15061 1565 aa11.15□□□□□ -0.62
CCDC60-203ENST00000536742 J3QL48 77 aa11.14□□□□□ -0.63
CCDC60-203ENST00000536742 ALDH1A1P00352 501 aa11.14□□□□□ -0.63
CCDC60-203ENST00000536742 ABL2P42684 1182 aa11.14□□□□□ -0.63
CCDC60-203ENST00000536742 PDXDC2PQ6P474 469 aa11.14□□□□□ -0.63
CCDC60-203ENST00000536742 FNBP4Q8N3X1 1017 aaPredicted RBP11.14□□□□□ -0.63
CCDC60-203ENST00000536742 EPS8L1Q8TE68 723 aa11.14□□□□□ -0.63
CCDC60-203ENST00000536742 ZNF592Q92610 1267 aa11.14□□□□□ -0.63
CCDC60-203ENST00000536742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC60-203ENST00000536742 ZNF518AQ6AHZ1 1483 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms