RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 RELBQ01201 579 aa10.96□□□□□ -0.65
CLIP1-207ENST00000536634 GLMNQ92990 594 aa10.96□□□□□ -0.65
CLIP1-207ENST00000536634 PLPP7Q8NBV4 271 aa10.95□□□□□ -0.66
CLIP1-207ENST00000536634 KIFC2Q96AC6 838 aa10.95□□□□□ -0.66
CLIP1-207ENST00000536634 UCN2Q96RP3 112 aa10.95□□□□□ -0.66
CLIP1-207ENST00000536634 ZNF395Q9H8N7 513 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-207ENST00000536634 OSBPL3Q9H4L5 887 aa10.94□□□□□ -0.66
CLIP1-207ENST00000536634 SPINT1O43278 529 aa10.93□□□□□ -0.66
CLIP1-207ENST00000536634 OXLD1Q5BKU9 147 aa10.93□□□□□ -0.66
CLIP1-207ENST00000536634 SOBPA7XYQ1 873 aa10.92□□□□□ -0.66
CLIP1-207ENST00000536634 SKIP12755 728 aa10.92□□□□□ -0.66
CLIP1-207ENST00000536634 PTGIRP43119 386 aa10.92□□□□□ -0.66
CLIP1-207ENST00000536634 ZMYND15Q9H091 742 aa10.92□□□□□ -0.66
CLIP1-207ENST00000536634 ZNF777Q9ULD5 760 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-207ENST00000536634 SOS2Q07890 1332 aaPredicted RBP10.91□□□□□ -0.66
CLIP1-207ENST00000536634 ATP5J2-PTCD1G3V325 749 aa10.91□□□□□ -0.66
CLIP1-207ENST00000536634 INSM2Q96T92 566 aaPredicted RBP10.91□□□□□ -0.66
CLIP1-207ENST00000536634 MAP7D1Q3KQU3 841 aa10.9□□□□□ -0.66
CLIP1-207ENST00000536634 TBC1D9Q6ZT07 1266 aa10.9□□□□□ -0.66
CLIP1-207ENST00000536634 MYCP01106 439 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-207ENST00000536634 CTSOP43234 321 aaPredicted RBP10.89□□□□□ -0.67
CLIP1-207ENST00000536634 CYP2U1Q7Z449 544 aa10.89□□□□□ -0.67
CLIP1-207ENST00000536634 NFATC2IPQ8NCF5 419 aa10.89□□□□□ -0.67
CLIP1-207ENST00000536634 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
CLIP1-207ENST00000536634 TTLL8A6PVC2 850 aa10.88□□□□□ -0.67
CLIP1-207ENST00000536634 DEPDC4Q8N2C3 294 aa10.88□□□□□ -0.67
CLIP1-207ENST00000536634 CALR3Q96L12 384 aaKnown RBP10.88□□□□□ -0.67
CLIP1-207ENST00000536634 ESF1Q9H501 851 aaKnown RBP10.88□□□□□ -0.67
CLIP1-207ENST00000536634 DNMT3LQ9UJW3 386 aa10.88□□□□□ -0.67
CLIP1-207ENST00000536634 A0A1W2PRU2 124 aa10.87□□□□□ -0.67
CLIP1-207ENST00000536634 USP17L5A8MUK1 530 aa10.87□□□□□ -0.67
CLIP1-207ENST00000536634 STAU1O95793 577 aaKnown RBP10.87□□□□□ -0.67
CLIP1-207ENST00000536634 USP4Q13107 963 aa10.87□□□□□ -0.67
CLIP1-207ENST00000536634 POLMQ9NP87 494 aaPredicted RBP10.87□□□□□ -0.67
CLIP1-207ENST00000536634 NCOA4Q13772 614 aa10.86□□□□□ -0.67
CLIP1-207ENST00000536634 FOXD4L5Q5VV16 416 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-207ENST00000536634 ARHGEF10LQ9HCE6 1279 aa10.86□□□□□ -0.67
CLIP1-207ENST00000536634 RAB6BQ9NRW1 208 aa10.86□□□□□ -0.67
CLIP1-207ENST00000536634 FIGNL2A6NMB9 653 aa10.85□□□□□ -0.67
CLIP1-207ENST00000536634 MAN1A2O60476 641 aa10.85□□□□□ -0.67
CLIP1-207ENST00000536634 MEN1O00255 615 aa10.84□□□□□ -0.67
CLIP1-207ENST00000536634 ATP9BO43861 1147 aa10.84□□□□□ -0.67
CLIP1-207ENST00000536634 C14orf37Q86TY3 774 aa10.84□□□□□ -0.67
CLIP1-207ENST00000536634 RNF217Q8TC41 542 aa10.84□□□□□ -0.67
CLIP1-207ENST00000536634 USP17L3A6NCW0 530 aa10.83□□□□□ -0.68
CLIP1-207ENST00000536634 USP17L4A6NCW7 530 aa10.83□□□□□ -0.68
CLIP1-207ENST00000536634 EML3Q32P44 896 aa10.83□□□□□ -0.68
CLIP1-207ENST00000536634 USP17L2Q6R6M4 530 aa10.83□□□□□ -0.68
CLIP1-207ENST00000536634 USP17L1Q7RTZ2 530 aa10.83□□□□□ -0.68
CLIP1-207ENST00000536634 TFIP11Q9UBB9 837 aaKnown RBP10.83□□□□□ -0.68
CLIP1-207ENST00000536634 STK17AQ9UEE5 414 aa10.83□□□□□ -0.68
CLIP1-207ENST00000536634 GNRH1P01148 92 aa10.82□□□□□ -0.68
CLIP1-207ENST00000536634 IL2RAP01589 272 aa10.82□□□□□ -0.68
CLIP1-207ENST00000536634 CLN3Q13286 438 aa10.82□□□□□ -0.68
CLIP1-207ENST00000536634 SIRT1Q96EB6 747 aa10.82□□□□□ -0.68
CLIP1-207ENST00000536634 CC2D2AQ9P2K1 1620 aa10.81□□□□□ -0.68
CLIP1-207ENST00000536634 PALM3A6NDB9 673 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-207ENST00000536634 PLEKHM2Q8IWE5 1019 aa10.81□□□□□ -0.68
CLIP1-207ENST00000536634 ETNK1Q9HBU6 452 aa10.81□□□□□ -0.68
CLIP1-207ENST00000536634 CECR2Q9BXF3 1484 aa10.81□□□□□ -0.68
CLIP1-207ENST00000536634 SCNN1DP51172 638 aa10.8□□□□□ -0.68
CLIP1-207ENST00000536634 PPP1R12CQ9BZL4 782 aa10.8□□□□□ -0.68
CLIP1-207ENST00000536634 PCDHGA11Q9Y5H2 935 aa10.8□□□□□ -0.68
CLIP1-207ENST00000536634 MAFBQ9Y5Q3 323 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-207ENST00000536634 MYO15BQ96JP2 1530 aa10.79□□□□□ -0.68
CLIP1-207ENST00000536634 LZTS3O60299 673 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-207ENST00000536634 RNF144AP50876 292 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-207ENST00000536634 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.79□□□□□ -0.68
CLIP1-207ENST00000536634 CNKSR1Q969H4 720 aa10.79□□□□□ -0.68
CLIP1-207ENST00000536634 NOD1Q9Y239 953 aa10.79□□□□□ -0.68
CLIP1-207ENST00000536634 GTF2IP78347 998 aa10.78□□□□□ -0.68
CLIP1-207ENST00000536634 NLRP3Q96P20 1036 aa10.78□□□□□ -0.68
CLIP1-207ENST00000536634 HRH3Q9Y5N1 445 aa10.78□□□□□ -0.68
CLIP1-207ENST00000536634 ARID3CA6NKF2 412 aa10.77□□□□□ -0.69
CLIP1-207ENST00000536634 XAGE2Q96GT9 111 aa10.77□□□□□ -0.69
CLIP1-207ENST00000536634 ESYT1Q9BSJ8 1104 aa10.77□□□□□ -0.69
CLIP1-207ENST00000536634 GPC1P35052 558 aa10.76□□□□□ -0.69
CLIP1-207ENST00000536634 VEGFBP49765 207 aa10.76□□□□□ -0.69
CLIP1-207ENST00000536634 GDF10P55107 478 aa10.76□□□□□ -0.69
CLIP1-207ENST00000536634 LOC100996750A0A140TA64 210 aa10.75□□□□□ -0.69
CLIP1-207ENST00000536634 TMEM229AB2RXF0 380 aa10.75□□□□□ -0.69
CLIP1-207ENST00000536634 WFS1O76024 890 aa10.75□□□□□ -0.69
CLIP1-207ENST00000536634 CLDN10P78369 228 aa10.75□□□□□ -0.69
CLIP1-207ENST00000536634 CENPCQ03188 943 aa10.75□□□□□ -0.69
CLIP1-207ENST00000536634 PTSQ03393 145 aa10.75□□□□□ -0.69
CLIP1-207ENST00000536634 ESCO1Q5FWF5 840 aa10.75□□□□□ -0.69
CLIP1-207ENST00000536634 CFAP70Q5T0N1 1121 aa10.75□□□□□ -0.69
CLIP1-207ENST00000536634 LYSMD3Q7Z3D4 306 aa10.75□□□□□ -0.69
CLIP1-207ENST00000536634 PRICKLE2Q7Z3G6 844 aa10.75□□□□□ -0.69
CLIP1-207ENST00000536634 KRTAP4-6Q9BYQ5 205 aa10.75□□□□□ -0.69
CLIP1-207ENST00000536634 GRIP2Q9C0E4 1043 aa10.75□□□□□ -0.69
CLIP1-207ENST00000536634 MKRN1Q9UHC7 482 aaKnown RBP10.75□□□□□ -0.69
CLIP1-207ENST00000536634 KIAA1024Q9UPX6 916 aa10.75□□□□□ -0.69
CLIP1-207ENST00000536634 INHAP05111 366 aa10.74□□□□□ -0.69
CLIP1-207ENST00000536634 SLC27A3Q5K4L6 730 aa10.74□□□□□ -0.69
CLIP1-207ENST00000536634 FHDC1Q9C0D6 1143 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-207ENST00000536634 NXF1Q9UBU9 619 aaKnown RBP10.74□□□□□ -0.69
CLIP1-207ENST00000536634 TERTO14746 1132 aaKnown RBP10.73□□□□□ -0.69
CLIP1-207ENST00000536634 RHOQP17081 205 aa10.73□□□□□ -0.69
CLIP1-207ENST00000536634 LMOD1P29536 600 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms