RNA–Protein interactions for RNA: ENST00000536559.1

CCND1-203, Transcript of cyclin D1, humanhuman

TSL 3 BASIC

Gene CCND1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-203ENST00000536559 TATP17735 454 aaPredicted RBP22.96■■□□□ 1.27
CCND1-203ENST00000536559 HSP90AB2PQ58FF8 381 aa22.96■■□□□ 1.27
CCND1-203ENST00000536559 USHBP1Q8N6Y0 703 aa22.94■■□□□ 1.26
CCND1-203ENST00000536559 PRIM1P49642 420 aaKnown RBP22.93■■□□□ 1.26
CCND1-203ENST00000536559 MYOM1P52179 1685 aa22.93■■□□□ 1.26
CCND1-203ENST00000536559 BTAF1O14981 1849 aa22.92■■□□□ 1.26
CCND1-203ENST00000536559 RGPD2P0DJD1 1756 aa22.92■■□□□ 1.26
CCND1-203ENST00000536559 HSPA5P11021 654 aaKnown RBP22.92■■□□□ 1.26
CCND1-203ENST00000536559 SLC27A3Q5K4L6 730 aa22.92■■□□□ 1.26
CCND1-203ENST00000536559 ZBTB7AO95365 584 aa22.91■■□□□ 1.26
CCND1-203ENST00000536559 EMILIN1Q9Y6C2 1016 aa22.9■■□□□ 1.26
CCND1-203ENST00000536559 MEGF6O75095 1541 aa22.89■■□□□ 1.26
CCND1-203ENST00000536559 ATF5Q9Y2D1 282 aaPredicted RBP22.89■■□□□ 1.25
CCND1-203ENST00000536559 PCDH11XQ9BZA7 1347 aa22.88■■□□□ 1.25
CCND1-203ENST00000536559 PCDH11YQ9BZA8 1340 aa22.88■■□□□ 1.25
CCND1-203ENST00000536559 HMGB2P26583 209 aaKnown RBP22.88■■□□□ 1.25
CCND1-203ENST00000536559 PDGFDQ9GZP0 370 aaPredicted RBP22.87■■□□□ 1.25
CCND1-203ENST00000536559 MTFR1LQ9H019 292 aa22.87■■□□□ 1.25
CCND1-203ENST00000536559 WASHC2AQ641Q2 1341 aa22.86■■□□□ 1.25
CCND1-203ENST00000536559 PANK3Q9H999 370 aa22.85■■□□□ 1.25
CCND1-203ENST00000536559 CASZ1Q86V15 1759 aa22.85■■□□□ 1.25
CCND1-203ENST00000536559 TNNT2P45379 298 aaPredicted RBP22.84■■□□□ 1.25
CCND1-203ENST00000536559 LRRC4BQ9NT99 713 aa22.84■■□□□ 1.25
CCND1-203ENST00000536559 SPG7Q9UQ90 795 aa22.84■■□□□ 1.25
CCND1-203ENST00000536559 TFCP2L1Q9NZI6 479 aa22.83■■□□□ 1.25
CCND1-203ENST00000536559 DOT1LQ8TEK3 1739 aa22.82■■□□□ 1.24
CCND1-203ENST00000536559 MAP2P11137 1827 aaKnown RBP22.82■■□□□ 1.24
CCND1-203ENST00000536559 POLKQ9UBT6 870 aa22.82■■□□□ 1.24
CCND1-203ENST00000536559 CCNL1Q9UK58 526 aaPredicted RBP22.82■■□□□ 1.24
CCND1-203ENST00000536559 ZNF827Q17R98 1081 aa22.8■■□□□ 1.24
CCND1-203ENST00000536559 SLC16A10Q8TF71 515 aa22.8■■□□□ 1.24
CCND1-203ENST00000536559 SHANK3Q9BYB0 1731 aa22.79■■□□□ 1.24
CCND1-203ENST00000536559 PTGER2P43116 358 aa22.79■■□□□ 1.24
CCND1-203ENST00000536559 MPRIPQ6WCQ1 1025 aa22.79■■□□□ 1.24
CCND1-203ENST00000536559 AKT1S1Q96B36 256 aa22.79■■□□□ 1.24
CCND1-203ENST00000536559 NSD2O96028 1365 aa22.78■■□□□ 1.24
CCND1-203ENST00000536559 EYA1Q99502 592 aa22.78■■□□□ 1.24
CCND1-203ENST00000536559 KNSTRNQ9Y448 316 aa22.78■■□□□ 1.24
CCND1-203ENST00000536559 MORC1Q86VD1 984 aa22.77■■□□□ 1.24
CCND1-203ENST00000536559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.77■■□□□ 1.24
CCND1-203ENST00000536559 PAPPAQ13219 1627 aa22.77■■□□□ 1.24
CCND1-203ENST00000536559 CYP27B1O15528 508 aa22.76■■□□□ 1.23
CCND1-203ENST00000536559 POLD1P28340 1107 aa22.76■■□□□ 1.23
CCND1-203ENST00000536559 KCNQ4P56696 695 aa22.76■■□□□ 1.23
CCND1-203ENST00000536559 SMARCC1Q92922 1105 aaPredicted RBP22.76■■□□□ 1.23
CCND1-203ENST00000536559 ARXQ96QS3 562 aa22.76■■□□□ 1.23
CCND1-203ENST00000536559 ANKRD26Q9UPS8 1709 aa22.75■■□□□ 1.23
CCND1-203ENST00000536559 MSH5O43196 834 aa22.75■■□□□ 1.23
CCND1-203ENST00000536559 FHDC1Q9C0D6 1143 aaPredicted RBP22.74■■□□□ 1.23
CCND1-203ENST00000536559 EIF4A2Q14240 407 aaKnown RBP22.73■■□□□ 1.23
CCND1-203ENST00000536559 IFNL2Q8IZJ0 200 aa22.73■■□□□ 1.23
CCND1-203ENST00000536559 LY75O60449 1722 aa22.73■■□□□ 1.23
CCND1-203ENST00000536559 SYT17Q9BSW7 474 aa22.72■■□□□ 1.23
CCND1-203ENST00000536559 YY1P25490 414 aa22.71■■□□□ 1.23
CCND1-203ENST00000536559 NKX1-1Q15270 411 aaPredicted RBP22.71■■□□□ 1.23
CCND1-203ENST00000536559 PNPLA7Q6ZV29 1317 aa22.71■■□□□ 1.23
CCND1-203ENST00000536559 NCAPD2Q15021 1401 aa22.71■■□□□ 1.23
CCND1-203ENST00000536559 SGIP1Q9BQI5 828 aa22.7■■□□□ 1.22
CCND1-203ENST00000536559 PALLDQ8WX93 1383 aa22.7■■□□□ 1.22
CCND1-203ENST00000536559 PKD1L3Q7Z443 1732 aa22.69■■□□□ 1.22
CCND1-203ENST00000536559 FLAD1Q8NFF5 587 aa22.69■■□□□ 1.22
CCND1-203ENST00000536559 TMOD3Q9NYL9 352 aa22.69■■□□□ 1.22
CCND1-203ENST00000536559 QSER1Q2KHR3 1735 aa22.68■■□□□ 1.22
CCND1-203ENST00000536559 PLEKHG2Q9H7P9 1386 aa22.67■■□□□ 1.22
CCND1-203ENST00000536559 PLEKHO1Q53GL0 409 aaPredicted RBP22.67■■□□□ 1.22
CCND1-203ENST00000536559 KLHL34Q8N239 644 aa22.67■■□□□ 1.22
CCND1-203ENST00000536559 PIGBQ92521 554 aa22.67■■□□□ 1.22
CCND1-203ENST00000536559 HSP90AB1P08238 724 aaKnown RBP22.66■■□□□ 1.22
CCND1-203ENST00000536559 PHKG2P15735 406 aa22.66■■□□□ 1.22
CCND1-203ENST00000536559 IGSF1Q8N6C5 1336 aa22.65■■□□□ 1.22
CCND1-203ENST00000536559 AMOTQ4VCS5 1084 aa22.65■■□□□ 1.22
CCND1-203ENST00000536559 AK7Q96M32 723 aa22.65■■□□□ 1.22
CCND1-203ENST00000536559 ITGB4P16144 1822 aa22.64■■□□□ 1.22
CCND1-203ENST00000536559 KIF7Q2M1P5 1343 aa22.64■■□□□ 1.22
CCND1-203ENST00000536559 COL23A1Q86Y22 540 aaPredicted RBP22.63■■□□□ 1.21
CCND1-203ENST00000536559 MAP3K5Q99683 1374 aa22.63■■□□□ 1.21
CCND1-203ENST00000536559 C5P01031 1676 aa22.61■■□□□ 1.21
CCND1-203ENST00000536559 LOC102724428A0A0B4J2F2 783 aa22.6■■□□□ 1.21
CCND1-203ENST00000536559 ERVV-2B6SEH9 535 aa22.6■■□□□ 1.21
CCND1-203ENST00000536559 SIK1P57059 783 aa22.6■■□□□ 1.21
CCND1-203ENST00000536559 C1orf141Q5JVX7 400 aa22.6■■□□□ 1.21
CCND1-203ENST00000536559 DCAF5Q96JK2 942 aa22.6■■□□□ 1.21
CCND1-203ENST00000536559 TUBGCP6Q96RT7 1819 aa22.59■■□□□ 1.21
CCND1-203ENST00000536559 GPR162Q16538 588 aa22.59■■□□□ 1.21
CCND1-203ENST00000536559 AMER1Q5JTC6 1135 aaPredicted RBP22.59■■□□□ 1.21
CCND1-203ENST00000536559 ZNF530Q6P9A1 599 aaPredicted RBP22.59■■□□□ 1.21
CCND1-203ENST00000536559 TOGARAM1Q9Y4F4 1720 aa22.59■■□□□ 1.21
CCND1-203ENST00000536559 ATP6V1AP38606 617 aa22.58■■□□□ 1.21
CCND1-203ENST00000536559 SULT6B1Q6IMI4 303 aa22.58■■□□□ 1.21
CCND1-203ENST00000536559 ASAP1Q9ULH1 1129 aa22.58■■□□□ 1.21
CCND1-203ENST00000536559 MTHFSP49914 203 aa22.56■■□□□ 1.2
CCND1-203ENST00000536559 CABP4P57796 275 aa22.56■■□□□ 1.2
CCND1-203ENST00000536559 TAF1LQ8IZX4 1826 aa22.56■■□□□ 1.2
CCND1-203ENST00000536559 MSL1Q68DK7 614 aa22.55■■□□□ 1.2
CCND1-203ENST00000536559 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
CCND1-203ENST00000536559 ATG3Q9NT62 314 aa22.55■■□□□ 1.2
CCND1-203ENST00000536559 PHF14O94880 888 aa22.54■■□□□ 1.2
CCND1-203ENST00000536559 IL13P35225 146 aa22.54■■□□□ 1.2
CCND1-203ENST00000536559 CC2D1BQ5T0F9 858 aaKnown RBP22.54■■□□□ 1.2
CCND1-203ENST00000536559 C4BP0C0L5 1744 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms