RNA–Protein interactions for RNA: ENST00000536196.1

CHFR-212, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 597 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-212ENST00000536196 TXNRD1Q16881 649 aa29■■■□□ 2.23
CHFR-212ENST00000536196 USHBP1Q8N6Y0 703 aa28.99■■■□□ 2.23
CHFR-212ENST00000536196 ZCRB1Q8TBF4 217 aaKnown RBP28.99■■■□□ 2.23
CHFR-212ENST00000536196 ANO8Q9HCE9 1232 aaPredicted RBP28.98■■■□□ 2.23
CHFR-212ENST00000536196 RAPGEF4Q8WZA2 1011 aa28.97■■■□□ 2.23
CHFR-212ENST00000536196 CASZ1Q86V15 1759 aa28.96■■■□□ 2.23
CHFR-212ENST00000536196 PPM1GO15355 546 aaPredicted RBP28.96■■■□□ 2.23
CHFR-212ENST00000536196 PANK3Q9H999 370 aa28.96■■■□□ 2.23
CHFR-212ENST00000536196 TATP17735 454 aaPredicted RBP28.94■■■□□ 2.22
CHFR-212ENST00000536196 WASHC2AQ641Q2 1341 aa28.93■■■□□ 2.22
CHFR-212ENST00000536196 PKD1L3Q7Z443 1732 aa28.91■■■□□ 2.22
CHFR-212ENST00000536196 NSD2O96028 1365 aa28.91■■■□□ 2.22
CHFR-212ENST00000536196 STK32BQ9NY57 414 aa28.91■■■□□ 2.22
CHFR-212ENST00000536196 PAPPAQ13219 1627 aa28.91■■■□□ 2.22
CHFR-212ENST00000536196 POLKQ9UBT6 870 aa28.9■■■□□ 2.22
CHFR-212ENST00000536196 NCAPD2Q15021 1401 aa28.89■■■□□ 2.22
CHFR-212ENST00000536196 LY75O60449 1722 aa28.89■■■□□ 2.21
CHFR-212ENST00000536196 TNNT2P45379 298 aaPredicted RBP28.88■■■□□ 2.21
CHFR-212ENST00000536196 SYTL4Q96C24 671 aaPredicted RBP28.88■■■□□ 2.21
CHFR-212ENST00000536196 SPON1Q9HCB6 807 aa28.88■■■□□ 2.21
CHFR-212ENST00000536196 PRIM1P49642 420 aaKnown RBP28.87■■■□□ 2.21
CHFR-212ENST00000536196 SLC15A2Q16348 729 aa28.87■■■□□ 2.21
CHFR-212ENST00000536196 PCDH11XQ9BZA7 1347 aa28.87■■■□□ 2.21
CHFR-212ENST00000536196 PCDH11YQ9BZA8 1340 aa28.87■■■□□ 2.21
CHFR-212ENST00000536196 KNSTRNQ9Y448 316 aa28.83■■■□□ 2.21
CHFR-212ENST00000536196 KIF7Q2M1P5 1343 aa28.83■■■□□ 2.21
CHFR-212ENST00000536196 ITGB4P16144 1822 aa28.83■■■□□ 2.21
CHFR-212ENST00000536196 EYA1Q99502 592 aa28.82■■■□□ 2.2
CHFR-212ENST00000536196 QSER1Q2KHR3 1735 aa28.81■■■□□ 2.2
CHFR-212ENST00000536196 SLC27A3Q5K4L6 730 aa28.81■■■□□ 2.2
CHFR-212ENST00000536196 TOGARAM1Q9Y4F4 1720 aa28.8■■■□□ 2.2
CHFR-212ENST00000536196 PDGFDQ9GZP0 370 aaPredicted RBP28.8■■■□□ 2.2
CHFR-212ENST00000536196 LRRC4BQ9NT99 713 aa28.8■■■□□ 2.2
CHFR-212ENST00000536196 MORC1Q86VD1 984 aa28.79■■■□□ 2.2
CHFR-212ENST00000536196 PPP1R1BQ9UD71 204 aaPredicted RBP28.79■■■□□ 2.2
CHFR-212ENST00000536196 CYP27B1O15528 508 aa28.78■■■□□ 2.2
CHFR-212ENST00000536196 EIF4A2Q14240 407 aaKnown RBP28.78■■■□□ 2.2
CHFR-212ENST00000536196 SPG7Q9UQ90 795 aa28.77■■■□□ 2.2
CHFR-212ENST00000536196 TUBGCP6Q96RT7 1819 aa28.76■■■□□ 2.19
CHFR-212ENST00000536196 ZBTB7AO95365 584 aa28.76■■■□□ 2.19
CHFR-212ENST00000536196 ZNF827Q17R98 1081 aa28.74■■■□□ 2.19
CHFR-212ENST00000536196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.73■■■□□ 2.19
CHFR-212ENST00000536196 PLEKHG2Q9H7P9 1386 aa28.72■■■□□ 2.19
CHFR-212ENST00000536196 IGSF1Q8N6C5 1336 aa28.71■■■□□ 2.19
CHFR-212ENST00000536196 AMER1Q5JTC6 1135 aaPredicted RBP28.71■■■□□ 2.19
CHFR-212ENST00000536196 AKT1S1Q96B36 256 aa28.71■■■□□ 2.19
CHFR-212ENST00000536196 C5P01031 1676 aa28.7■■■□□ 2.19
CHFR-212ENST00000536196 MTFR1LQ9H019 292 aa28.7■■■□□ 2.18
CHFR-212ENST00000536196 CCNL1Q9UK58 526 aaPredicted RBP28.7■■■□□ 2.18
CHFR-212ENST00000536196 ATF5Q9Y2D1 282 aaPredicted RBP28.7■■■□□ 2.18
CHFR-212ENST00000536196 TAF1LQ8IZX4 1826 aa28.7■■■□□ 2.18
CHFR-212ENST00000536196 KCNQ4P56696 695 aa28.69■■■□□ 2.18
CHFR-212ENST00000536196 NKX1-1Q15270 411 aaPredicted RBP28.69■■■□□ 2.18
CHFR-212ENST00000536196 MPRIPQ6WCQ1 1025 aa28.69■■■□□ 2.18
CHFR-212ENST00000536196 PTGER2P43116 358 aa28.67■■■□□ 2.18
CHFR-212ENST00000536196 IFNL2Q8IZJ0 200 aa28.66■■■□□ 2.18
CHFR-212ENST00000536196 PALLDQ8WX93 1383 aa28.65■■■□□ 2.18
CHFR-212ENST00000536196 PHKG2P15735 406 aa28.64■■■□□ 2.18
CHFR-212ENST00000536196 TFCP2L1Q9NZI6 479 aa28.64■■■□□ 2.18
CHFR-212ENST00000536196 PER1O15534 1290 aaPredicted RBP28.63■■■□□ 2.17
CHFR-212ENST00000536196 COL24A1Q17RW2 1714 aa28.63■■■□□ 2.17
CHFR-212ENST00000536196 HMGB2P26583 209 aaKnown RBP28.62■■■□□ 2.17
CHFR-212ENST00000536196 SMARCC1Q92922 1105 aaPredicted RBP28.62■■■□□ 2.17
CHFR-212ENST00000536196 PNPLA7Q6ZV29 1317 aa28.62■■■□□ 2.17
CHFR-212ENST00000536196 SLC16A10Q8TF71 515 aa28.61■■■□□ 2.17
CHFR-212ENST00000536196 PIGBQ92521 554 aa28.6■■■□□ 2.17
CHFR-212ENST00000536196 SGIP1Q9BQI5 828 aa28.6■■■□□ 2.17
CHFR-212ENST00000536196 PLEKHO1Q53GL0 409 aaPredicted RBP28.59■■■□□ 2.17
CHFR-212ENST00000536196 TMOD3Q9NYL9 352 aa28.59■■■□□ 2.17
CHFR-212ENST00000536196 CC2D1BQ5T0F9 858 aaKnown RBP28.57■■■□□ 2.16
CHFR-212ENST00000536196 C4BP0C0L5 1744 aa28.57■■■□□ 2.16
CHFR-212ENST00000536196 IL13P35225 146 aa28.56■■■□□ 2.16
CHFR-212ENST00000536196 AMOTQ4VCS5 1084 aa28.56■■■□□ 2.16
CHFR-212ENST00000536196 AEBP1Q8IUX7 1158 aa28.56■■■□□ 2.16
CHFR-212ENST00000536196 KDRP35968 1356 aa28.55■■■□□ 2.16
CHFR-212ENST00000536196 NPC1L1Q9UHC9 1359 aa28.55■■■□□ 2.16
CHFR-212ENST00000536196 HSP90AB1P08238 724 aaKnown RBP28.55■■■□□ 2.16
CHFR-212ENST00000536196 MTHFSP49914 203 aa28.55■■■□□ 2.16
CHFR-212ENST00000536196 DCAF8L1A6NGE4 600 aa28.54■■■□□ 2.16
CHFR-212ENST00000536196 SULT6B1Q6IMI4 303 aa28.54■■■□□ 2.16
CHFR-212ENST00000536196 ZNF530Q6P9A1 599 aaPredicted RBP28.53■■■□□ 2.16
CHFR-212ENST00000536196 ARXQ96QS3 562 aa28.53■■■□□ 2.16
CHFR-212ENST00000536196 UBR3Q6ZT12 1888 aa28.53■■■□□ 2.16
CHFR-212ENST00000536196 FHDC1Q9C0D6 1143 aaPredicted RBP28.52■■■□□ 2.16
CHFR-212ENST00000536196 DCAF5Q96JK2 942 aa28.51■■■□□ 2.15
CHFR-212ENST00000536196 ERVV-2B6SEH9 535 aa28.5■■■□□ 2.15
CHFR-212ENST00000536196 POLD1P28340 1107 aa28.5■■■□□ 2.15
CHFR-212ENST00000536196 VIRMAQ69YN4 1812 aaKnown RBP28.5■■■□□ 2.15
CHFR-212ENST00000536196 SCN11AQ9UI33 1791 aa28.5■■■□□ 2.15
CHFR-212ENST00000536196 LOC102724428A0A0B4J2F2 783 aa28.49■■■□□ 2.15
CHFR-212ENST00000536196 MSH5O43196 834 aa28.49■■■□□ 2.15
CHFR-212ENST00000536196 SIK1P57059 783 aa28.49■■■□□ 2.15
CHFR-212ENST00000536196 COL23A1Q86Y22 540 aaPredicted RBP28.49■■■□□ 2.15
CHFR-212ENST00000536196 SYT17Q9BSW7 474 aa28.49■■■□□ 2.15
CHFR-212ENST00000536196 ASAP1Q9ULH1 1129 aa28.49■■■□□ 2.15
CHFR-212ENST00000536196 C1orf141Q5JVX7 400 aa28.48■■■□□ 2.15
CHFR-212ENST00000536196 KDM6AO15550 1401 aaPredicted RBP28.48■■■□□ 2.15
CHFR-212ENST00000536196 FLAD1Q8NFF5 587 aa28.47■■■□□ 2.15
CHFR-212ENST00000536196 ZNF831Q5JPB2 1677 aa28.47■■■□□ 2.15
CHFR-212ENST00000536196 MAP3K5Q99683 1374 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms