RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 KDRP35968 1356 aa17.62■□□□□ 0.41
TMEM258-202ENST00000535042 CCDC184Q52MB2 194 aa17.61■□□□□ 0.41
TMEM258-202ENST00000535042 TNS2Q63HR2 1409 aa17.61■□□□□ 0.41
TMEM258-202ENST00000535042 ZCRB1Q8TBF4 217 aaKnown RBP17.6■□□□□ 0.41
TMEM258-202ENST00000535042 NUDCQ9Y266 331 aa17.6■□□□□ 0.41
TMEM258-202ENST00000535042 U2AF1L5P0DN76 240 aaPredicted RBP17.58■□□□□ 0.4
TMEM258-202ENST00000535042 U2AF1Q01081 240 aaKnown RBP eCLIP17.58■□□□□ 0.4
TMEM258-202ENST00000535042 DDX54Q8TDD1 881 aaKnown RBP17.58■□□□□ 0.4
TMEM258-202ENST00000535042 CYP27B1O15528 508 aa17.56■□□□□ 0.4
TMEM258-202ENST00000535042 RSPH6AQ9H0K4 717 aa17.56■□□□□ 0.4
TMEM258-202ENST00000535042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.56■□□□□ 0.4
TMEM258-202ENST00000535042 DIEXFQ68CQ4 756 aaKnown RBP17.55■□□□□ 0.4
TMEM258-202ENST00000535042 SPG7Q9UQ90 795 aa17.55■□□□□ 0.4
TMEM258-202ENST00000535042 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
TMEM258-202ENST00000535042 PLEKHO1Q53GL0 409 aaPredicted RBP17.54■□□□□ 0.4
TMEM258-202ENST00000535042 FAM196AQ6ZSG2 479 aa17.54■□□□□ 0.4
TMEM258-202ENST00000535042 SHANK3Q9BYB0 1731 aa17.53■□□□□ 0.4
TMEM258-202ENST00000535042 FCHSD2O94868 740 aa17.53■□□□□ 0.4
TMEM258-202ENST00000535042 PHACTR3Q96KR7 559 aa17.53■□□□□ 0.4
TMEM258-202ENST00000535042 PLEKHG2Q9H7P9 1386 aa17.53■□□□□ 0.4
TMEM258-202ENST00000535042 PKD1L3Q7Z443 1732 aa17.52■□□□□ 0.4
TMEM258-202ENST00000535042 PCDH11XQ9BZA7 1347 aa17.52■□□□□ 0.4
TMEM258-202ENST00000535042 PCDH11YQ9BZA8 1340 aa17.52■□□□□ 0.4
TMEM258-202ENST00000535042 AMOTQ4VCS5 1084 aa17.52■□□□□ 0.4
TMEM258-202ENST00000535042 UPF1Q92900 1129 aaKnown RBP eCLIP17.52■□□□□ 0.4
TMEM258-202ENST00000535042 BCL9O00512 1426 aa17.51■□□□□ 0.39
TMEM258-202ENST00000535042 PHKG2P15735 406 aa17.51■□□□□ 0.39
TMEM258-202ENST00000535042 MTHFSDQ2M296 383 aaKnown RBP17.51■□□□□ 0.39
TMEM258-202ENST00000535042 PTF1AQ7RTS3 328 aa17.51■□□□□ 0.39
TMEM258-202ENST00000535042 ZNF530Q6P9A1 599 aaPredicted RBP17.5■□□□□ 0.39
TMEM258-202ENST00000535042 PLEKHF1Q96S99 279 aa17.5■□□□□ 0.39
TMEM258-202ENST00000535042 MRS2Q9HD23 443 aa17.5■□□□□ 0.39
TMEM258-202ENST00000535042 ADAMTS8Q9UP79 889 aa17.5■□□□□ 0.39
TMEM258-202ENST00000535042 SOCS7O14512 581 aa17.49■□□□□ 0.39
TMEM258-202ENST00000535042 TRIM37O94972 964 aa17.49■□□□□ 0.39
TMEM258-202ENST00000535042 NKX1-1Q15270 411 aaPredicted RBP17.49■□□□□ 0.39
TMEM258-202ENST00000535042 IFNL2Q8IZJ0 200 aa17.49■□□□□ 0.39
TMEM258-202ENST00000535042 ACSBG1Q96GR2 724 aa17.49■□□□□ 0.39
TMEM258-202ENST00000535042 KCNQ2O43526 872 aa17.48■□□□□ 0.39
TMEM258-202ENST00000535042 WDR43Q15061 677 aaKnown RBP eCLIP17.48■□□□□ 0.39
TMEM258-202ENST00000535042 PNISRQ8TF01 805 aaKnown RBP17.48■□□□□ 0.39
TMEM258-202ENST00000535042 MIER1Q8N108 512 aa17.46■□□□□ 0.39
TMEM258-202ENST00000535042 PRIM1P49642 420 aaKnown RBP17.45■□□□□ 0.38
TMEM258-202ENST00000535042 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
TMEM258-202ENST00000535042 C1orf141Q5JVX7 400 aa17.45■□□□□ 0.38
TMEM258-202ENST00000535042 CCDC146Q8IYE0 955 aa17.45■□□□□ 0.38
TMEM258-202ENST00000535042 MPRIPQ6WCQ1 1025 aa17.44■□□□□ 0.38
TMEM258-202ENST00000535042 GAS2L2Q8NHY3 880 aa17.44■□□□□ 0.38
TMEM258-202ENST00000535042 BCL11BQ9C0K0 894 aaPredicted RBP17.44■□□□□ 0.38
TMEM258-202ENST00000535042 KDM6AO15550 1401 aaPredicted RBP17.44■□□□□ 0.38
TMEM258-202ENST00000535042 CCDC125Q86Z20 511 aa17.43■□□□□ 0.38
TMEM258-202ENST00000535042 LGR6Q9HBX8 967 aa17.43■□□□□ 0.38
TMEM258-202ENST00000535042 HSP90AB1P08238 724 aaKnown RBP17.42■□□□□ 0.38
TMEM258-202ENST00000535042 DEFB132Q7Z7B7 95 aa17.42■□□□□ 0.38
TMEM258-202ENST00000535042 SYTL4Q96C24 671 aaPredicted RBP17.42■□□□□ 0.38
TMEM258-202ENST00000535042 DCAF5Q96JK2 942 aa17.42■□□□□ 0.38
TMEM258-202ENST00000535042 PNNQ9H307 717 aaKnown RBP17.42■□□□□ 0.38
TMEM258-202ENST00000535042 CCER2I3L3R5 266 aa17.41■□□□□ 0.38
TMEM258-202ENST00000535042 APBA3O96018 575 aa17.41■□□□□ 0.38
TMEM258-202ENST00000535042 RUNDC1Q96C34 613 aa17.41■□□□□ 0.38
TMEM258-202ENST00000535042 SBF2Q86WG5 1849 aa17.41■□□□□ 0.38
TMEM258-202ENST00000535042 TOGARAM1Q9Y4F4 1720 aa17.41■□□□□ 0.38
TMEM258-202ENST00000535042 MAP3K5Q99683 1374 aa17.4■□□□□ 0.38
TMEM258-202ENST00000535042 GNAT3A8MTJ3 354 aa17.4■□□□□ 0.38
TMEM258-202ENST00000535042 RNMTO43148 476 aaKnown RBP17.4■□□□□ 0.38
TMEM258-202ENST00000535042 IL17REQ8NFR9 667 aa17.4■□□□□ 0.38
TMEM258-202ENST00000535042 DOT1LQ8TEK3 1739 aa17.4■□□□□ 0.38
TMEM258-202ENST00000535042 MAPK8IP3Q9UPT6 1336 aa17.4■□□□□ 0.38
TMEM258-202ENST00000535042 NHSQ6T4R5 1651 aa17.39■□□□□ 0.37
TMEM258-202ENST00000535042 TNS1Q9HBL0 1735 aaKnown RBP17.39■□□□□ 0.37
TMEM258-202ENST00000535042 NEFMP07197 916 aa17.39■□□□□ 0.37
TMEM258-202ENST00000535042 SF3B2Q13435 895 aaKnown RBP17.39■□□□□ 0.37
TMEM258-202ENST00000535042 NFE2L2Q16236 605 aa17.39■□□□□ 0.37
TMEM258-202ENST00000535042 PIGBQ92521 554 aa17.39■□□□□ 0.37
TMEM258-202ENST00000535042 ERVV-2B6SEH9 535 aa17.38■□□□□ 0.37
TMEM258-202ENST00000535042 EN1Q05925 392 aaPredicted RBP17.38■□□□□ 0.37
TMEM258-202ENST00000535042 TMPOP42166 694 aaKnown RBP17.37■□□□□ 0.37
TMEM258-202ENST00000535042 DCTN1Q14203 1278 aa17.37■□□□□ 0.37
TMEM258-202ENST00000535042 FAM9BQ8IZU0 186 aa17.37■□□□□ 0.37
TMEM258-202ENST00000535042 RRP7AQ9Y3A4 280 aaKnown RBP17.37■□□□□ 0.37
TMEM258-202ENST00000535042 EP400Q96L91 3159 aa17.36■□□□□ 0.37
TMEM258-202ENST00000535042 BAG6P46379 1132 aa17.36■□□□□ 0.37
TMEM258-202ENST00000535042 CABP4P57796 275 aa17.36■□□□□ 0.37
TMEM258-202ENST00000535042 MCM10Q7L590 875 aa17.36■□□□□ 0.37
TMEM258-202ENST00000535042 NFATC2IPQ8NCF5 419 aa17.36■□□□□ 0.37
TMEM258-202ENST00000535042 CAMKK2Q96RR4 588 aa17.36■□□□□ 0.37
TMEM258-202ENST00000535042 TMOD3Q9NYL9 352 aa17.36■□□□□ 0.37
TMEM258-202ENST00000535042 APAF1O14727 1248 aa17.35■□□□□ 0.37
TMEM258-202ENST00000535042 PLSCR1O15162 318 aa17.35■□□□□ 0.37
TMEM258-202ENST00000535042 RIPK4P57078 832 aa17.35■□□□□ 0.37
TMEM258-202ENST00000535042 EZH2Q15910 746 aaKnown RBP17.35■□□□□ 0.37
TMEM258-202ENST00000535042 ADAMTS7Q9UKP4 1686 aa17.35■□□□□ 0.37
TMEM258-202ENST00000535042 SENP3-EIF4A1A0A087X0R7 540 aa17.34■□□□□ 0.37
TMEM258-202ENST00000535042 HTATSF1O43719 755 aaKnown RBP17.34■□□□□ 0.37
TMEM258-202ENST00000535042 NEUROD2Q15784 382 aa17.34■□□□□ 0.37
TMEM258-202ENST00000535042 PROM2Q8N271 834 aa17.34■□□□□ 0.37
TMEM258-202ENST00000535042 CEMIPQ8WUJ3 1361 aa17.34■□□□□ 0.37
TMEM258-202ENST00000535042 SLC52A2Q9HAB3 445 aa17.34■□□□□ 0.37
TMEM258-202ENST00000535042 BTAF1O14981 1849 aa17.33■□□□□ 0.37
TMEM258-202ENST00000535042 RTF1Q92541 710 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms