RNA–Protein interactions for RNA: ENST00000534958.5

PACRG-204, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-204ENST00000534958 USP35Q9P2H5 1018 aa13.99□□□□□ -0.17
PACRG-204ENST00000534958 PKD1L3Q7Z443 1732 aa13.98□□□□□ -0.17
PACRG-204ENST00000534958 GJD4Q96KN9 370 aaPredicted RBP13.98□□□□□ -0.17
PACRG-204ENST00000534958 SPG7Q9UQ90 795 aa13.98□□□□□ -0.17
PACRG-204ENST00000534958 OVOS2A0A0G2JMS6 1433 aa13.98□□□□□ -0.17
PACRG-204ENST00000534958 MEGF6O75095 1541 aa13.97□□□□□ -0.17
PACRG-204ENST00000534958 QTRT2Q9H974 415 aaKnown RBP13.97□□□□□ -0.17
PACRG-204ENST00000534958 DISP2A7MBM2 1401 aa13.97□□□□□ -0.17
PACRG-204ENST00000534958 LMOD3Q0VAK6 560 aa13.96□□□□□ -0.17
PACRG-204ENST00000534958 NCBP3Q53F19 620 aaKnown RBP13.96□□□□□ -0.17
PACRG-204ENST00000534958 CCDC146Q8IYE0 955 aa13.96□□□□□ -0.17
PACRG-204ENST00000534958 PLEKHF1Q96S99 279 aa13.96□□□□□ -0.17
PACRG-204ENST00000534958 GLI3P10071 1580 aa13.96□□□□□ -0.18
PACRG-204ENST00000534958 PCDH11XQ9BZA7 1347 aa13.95□□□□□ -0.18
PACRG-204ENST00000534958 PCDH11YQ9BZA8 1340 aa13.95□□□□□ -0.18
PACRG-204ENST00000534958 RBM6P78332 1123 aaKnown RBP13.95□□□□□ -0.18
PACRG-204ENST00000534958 TNS2Q63HR2 1409 aa13.95□□□□□ -0.18
PACRG-204ENST00000534958 THSD7AQ9UPZ6 1657 aa13.95□□□□□ -0.18
PACRG-204ENST00000534958 A0A0G2JS52 829 aa13.94□□□□□ -0.18
PACRG-204ENST00000534958 HSP90AB1P08238 724 aaKnown RBP13.94□□□□□ -0.18
PACRG-204ENST00000534958 MYT1Q01538 1121 aa13.94□□□□□ -0.18
PACRG-204ENST00000534958 NFE2L2Q16236 605 aa13.94□□□□□ -0.18
PACRG-204ENST00000534958 C1orf141Q5JVX7 400 aa13.94□□□□□ -0.18
PACRG-204ENST00000534958 ZCRB1Q8TBF4 217 aaKnown RBP13.94□□□□□ -0.18
PACRG-204ENST00000534958 DLG5Q8TDM6 1919 aa13.94□□□□□ -0.18
PACRG-204ENST00000534958 LRRC37A3O60309 1634 aa13.93□□□□□ -0.18
PACRG-204ENST00000534958 EXOC5O00471 708 aa13.93□□□□□ -0.18
PACRG-204ENST00000534958 APAF1O14727 1248 aa13.93□□□□□ -0.18
PACRG-204ENST00000534958 DDB1Q16531 1140 aa13.93□□□□□ -0.18
PACRG-204ENST00000534958 FAM98CQ17RN3 349 aaKnown RBP13.93□□□□□ -0.18
PACRG-204ENST00000534958 HTATSF1O43719 755 aaKnown RBP13.92□□□□□ -0.18
PACRG-204ENST00000534958 TMPOP42166 694 aaKnown RBP13.92□□□□□ -0.18
PACRG-204ENST00000534958 ZNF530Q6P9A1 599 aaPredicted RBP13.92□□□□□ -0.18
PACRG-204ENST00000534958 IFNL2Q8IZJ0 200 aa13.92□□□□□ -0.18
PACRG-204ENST00000534958 RTF1Q92541 710 aaKnown RBP13.92□□□□□ -0.18
PACRG-204ENST00000534958 SHANK3Q9BYB0 1731 aa13.91□□□□□ -0.18
PACRG-204ENST00000534958 RXRBP28702 533 aa13.91□□□□□ -0.18
PACRG-204ENST00000534958 HNRNPUQ00839 825 aaKnown RBP eCLIP13.91□□□□□ -0.18
PACRG-204ENST00000534958 MTHFSDQ2M296 383 aaKnown RBP13.91□□□□□ -0.18
PACRG-204ENST00000534958 AKAP4Q5JQC9 854 aa13.91□□□□□ -0.18
PACRG-204ENST00000534958 PHACTR3Q96KR7 559 aa13.91□□□□□ -0.18
PACRG-204ENST00000534958 MAP3K5Q99683 1374 aa13.91□□□□□ -0.18
PACRG-204ENST00000534958 VIRMAQ69YN4 1812 aaKnown RBP13.9□□□□□ -0.18
PACRG-204ENST00000534958 GNAT3A8MTJ3 354 aa13.9□□□□□ -0.18
PACRG-204ENST00000534958 ONECUT3O60422 494 aaPredicted RBP13.9□□□□□ -0.18
PACRG-204ENST00000534958 KCNA4P22459 653 aa13.9□□□□□ -0.18
PACRG-204ENST00000534958 RIPK4P57078 832 aa13.9□□□□□ -0.18
PACRG-204ENST00000534958 CALD1Q05682 793 aaKnown RBP13.9□□□□□ -0.18
PACRG-204ENST00000534958 PDE3BQ13370 1112 aa13.9□□□□□ -0.18
PACRG-204ENST00000534958 CCDC27Q2M243 656 aa13.9□□□□□ -0.18
PACRG-204ENST00000534958 PHKG2P15735 406 aa13.88□□□□□ -0.19
PACRG-204ENST00000534958 NEUROD2Q15784 382 aa13.88□□□□□ -0.19
PACRG-204ENST00000534958 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
PACRG-204ENST00000534958 SEPT12Q8IYM1 358 aa13.87□□□□□ -0.19
PACRG-204ENST00000534958 DDX54Q8TDD1 881 aaKnown RBP13.87□□□□□ -0.19
PACRG-204ENST00000534958 RRP7AQ9Y3A4 280 aaKnown RBP13.87□□□□□ -0.19
PACRG-204ENST00000534958 ZBED9Q6R2W3 1325 aa13.87□□□□□ -0.19
PACRG-204ENST00000534958 DCAF5Q96JK2 942 aa13.86□□□□□ -0.19
PACRG-204ENST00000534958 RGS17Q9UGC6 210 aaPredicted RBP13.86□□□□□ -0.19
PACRG-204ENST00000534958 ADAMTS7Q9UKP4 1686 aa13.85□□□□□ -0.19
PACRG-204ENST00000534958 CYP27B1O15528 508 aa13.85□□□□□ -0.19
PACRG-204ENST00000534958 NKX1-1Q15270 411 aaPredicted RBP13.85□□□□□ -0.19
PACRG-204ENST00000534958 BRWD3Q6RI45 1802 aa13.85□□□□□ -0.19
PACRG-204ENST00000534958 KAT6BQ8WYB5 2073 aa13.84□□□□□ -0.19
PACRG-204ENST00000534958 POTEAQ6S8J7 498 aa13.84□□□□□ -0.19
PACRG-204ENST00000534958 WDR63Q8IWG1 891 aa13.84□□□□□ -0.19
PACRG-204ENST00000534958 YTHDC1Q96MU7 727 aaKnown RBP13.84□□□□□ -0.19
PACRG-204ENST00000534958 BCL9O00512 1426 aa13.83□□□□□ -0.2
PACRG-204ENST00000534958 ERVV-2B6SEH9 535 aa13.83□□□□□ -0.2
PACRG-204ENST00000534958 TEFQ10587 303 aa13.83□□□□□ -0.2
PACRG-204ENST00000534958 KRT27Q7Z3Y8 459 aa13.83□□□□□ -0.2
PACRG-204ENST00000534958 WWC1Q8IX03 1113 aa13.83□□□□□ -0.2
PACRG-204ENST00000534958 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
PACRG-204ENST00000534958 SALL2Q9Y467 1007 aaPredicted RBP13.83□□□□□ -0.2
PACRG-204ENST00000534958 IL16Q14005 1332 aa13.83□□□□□ -0.2
PACRG-204ENST00000534958 CEMIPQ8WUJ3 1361 aa13.83□□□□□ -0.2
PACRG-204ENST00000534958 RGS12O14924 1447 aa13.82□□□□□ -0.2
PACRG-204ENST00000534958 DOT1LQ8TEK3 1739 aa13.82□□□□□ -0.2
PACRG-204ENST00000534958 RNMTO43148 476 aaKnown RBP13.82□□□□□ -0.2
PACRG-204ENST00000534958 MPRIPQ6WCQ1 1025 aa13.82□□□□□ -0.2
PACRG-204ENST00000534958 KDM6AO15550 1401 aaPredicted RBP13.81□□□□□ -0.2
PACRG-204ENST00000534958 MRC1P22897 1456 aa13.81□□□□□ -0.2
PACRG-204ENST00000534958 GNAI1P63096 354 aa13.81□□□□□ -0.2
PACRG-204ENST00000534958 MARCH10Q8NA82 808 aaPredicted RBP13.81□□□□□ -0.2
PACRG-204ENST00000534958 BABAM1Q9NWV8 329 aa13.81□□□□□ -0.2
PACRG-204ENST00000534958 SIPA1L3O60292 1781 aaPredicted RBP13.81□□□□□ -0.2
PACRG-204ENST00000534958 ITGB4P16144 1822 aa13.8□□□□□ -0.2
PACRG-204ENST00000534958 CABP4P57796 275 aa13.8□□□□□ -0.2
PACRG-204ENST00000534958 GOLGA2Q08379 1002 aa13.8□□□□□ -0.2
PACRG-204ENST00000534958 FAM196AQ6ZSG2 479 aa13.8□□□□□ -0.2
PACRG-204ENST00000534958 MCM10Q7L590 875 aa13.8□□□□□ -0.2
PACRG-204ENST00000534958 IFT57Q9NWB7 429 aa13.8□□□□□ -0.2
PACRG-204ENST00000534958 TOGARAM1Q9Y4F4 1720 aa13.8□□□□□ -0.2
PACRG-204ENST00000534958 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
PACRG-204ENST00000534958 E9PSI1 815 aa13.79□□□□□ -0.2
PACRG-204ENST00000534958 IL17REQ8NFR9 667 aa13.79□□□□□ -0.2
PACRG-204ENST00000534958 MYH16Q9H6N6 1097 aa13.79□□□□□ -0.2
PACRG-204ENST00000534958 SLC52A2Q9HAB3 445 aa13.79□□□□□ -0.2
PACRG-204ENST00000534958 TMOD3Q9NYL9 352 aa13.79□□□□□ -0.2
PACRG-204ENST00000534958 ZNF521Q96K83 1311 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms