RNA–Protein interactions for RNA: ENST00000534531.1

TCN1-205, Transcript of transcobalamin 1, humanhuman

TSL 5

Gene TCN1, Length 684 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-205ENST00000534531 ERVK-9P63128 1117 aa8.95□□□□□ -0.98
TCN1-205ENST00000534531 ESF1Q9H501 851 aaKnown RBP8.95□□□□□ -0.98
TCN1-205ENST00000534531 PCDHB11Q9Y5F2 797 aa8.95□□□□□ -0.98
TCN1-205ENST00000534531 FOXD4L5Q5VV16 416 aaPredicted RBP8.94□□□□□ -0.98
TCN1-205ENST00000534531 LORP23490 312 aaPredicted RBP8.93□□□□□ -0.98
TCN1-205ENST00000534531 LYSMD3Q7Z3D4 306 aa8.93□□□□□ -0.98
TCN1-205ENST00000534531 MEN1O00255 615 aa8.92□□□□□ -0.98
TCN1-205ENST00000534531 ITGA6P23229 1130 aa8.92□□□□□ -0.98
TCN1-205ENST00000534531 SCTRP47872 440 aa8.92□□□□□ -0.98
TCN1-205ENST00000534531 RNF144AP50876 292 aaPredicted RBP8.92□□□□□ -0.98
TCN1-205ENST00000534531 CEP126Q9P2H0 1117 aa8.92□□□□□ -0.98
TCN1-205ENST00000534531 A0A1W2PRU2 124 aa8.91□□□□□ -0.98
TCN1-205ENST00000534531 EIF4G2P78344 907 aaKnown RBP eCLIP8.91□□□□□ -0.98
TCN1-205ENST00000534531 PRICKLE2Q7Z3G6 844 aa8.91□□□□□ -0.98
TCN1-205ENST00000534531 CYP2U1Q7Z449 544 aa8.91□□□□□ -0.98
TCN1-205ENST00000534531 GPR161Q8N6U8 529 aaKnown RBP8.91□□□□□ -0.98
TCN1-205ENST00000534531 NANOS1Q8WY41 292 aaKnown RBP8.91□□□□□ -0.98
TCN1-205ENST00000534531 SENP3-EIF4A1A0A087X0R7 540 aa8.9□□□□□ -0.98
TCN1-205ENST00000534531 CDC14CA4D256 554 aa8.9□□□□□ -0.98
TCN1-205ENST00000534531 NLRP3Q96P20 1036 aa8.9□□□□□ -0.98
TCN1-205ENST00000534531 NACADO15069 1562 aa8.9□□□□□ -0.99
TCN1-205ENST00000534531 GPC1P35052 558 aa8.89□□□□□ -0.99
TCN1-205ENST00000534531 IRF5Q13568 498 aa8.89□□□□□ -0.99
TCN1-205ENST00000534531 VWA5B2Q8N398 1253 aa8.89□□□□□ -0.99
TCN1-205ENST00000534531 OSBPL3Q9H4L5 887 aa8.89□□□□□ -0.99
TCN1-205ENST00000534531 GDPD2Q9HCC8 539 aa8.89□□□□□ -0.99
TCN1-205ENST00000534531 SV2AQ7L0J3 742 aa8.88□□□□□ -0.99
TCN1-205ENST00000534531 TRAK2O60296 914 aa8.87□□□□□ -0.99
TCN1-205ENST00000534531 MYCP01106 439 aaPredicted RBP8.87□□□□□ -0.99
TCN1-205ENST00000534531 RHOQP17081 205 aa8.87□□□□□ -0.99
TCN1-205ENST00000534531 ABL2P42684 1182 aa8.87□□□□□ -0.99
TCN1-205ENST00000534531 CLN3Q13286 438 aa8.87□□□□□ -0.99
TCN1-205ENST00000534531 SLC27A3Q5K4L6 730 aa8.87□□□□□ -0.99
TCN1-205ENST00000534531 CNTNAP3BQ96NU0 1288 aa8.87□□□□□ -0.99
TCN1-205ENST00000534531 CCDC85AQ96PX6 553 aaPredicted RBP8.87□□□□□ -0.99
TCN1-205ENST00000534531 COL25A1Q9BXS0 654 aaPredicted RBP8.87□□□□□ -0.99
TCN1-205ENST00000534531 CNTNAP3Q9BZ76 1288 aa8.87□□□□□ -0.99
TCN1-205ENST00000534531 KRT76Q01546 638 aa8.86□□□□□ -0.99
TCN1-205ENST00000534531 VAC14Q08AM6 782 aa8.86□□□□□ -0.99
TCN1-205ENST00000534531 SLFNL1Q499Z3 407 aa8.86□□□□□ -0.99
TCN1-205ENST00000534531 ARHGEF10LQ9HCE6 1279 aa8.86□□□□□ -0.99
TCN1-205ENST00000534531 GNRH1P01148 92 aa8.85□□□□□ -0.99
TCN1-205ENST00000534531 MCM6Q14566 821 aa8.85□□□□□ -0.99
TCN1-205ENST00000534531 WASHC4Q2M389 1173 aa8.85□□□□□ -0.99
TCN1-205ENST00000534531 CDCA7Q9BWT1 371 aaPredicted RBP8.85□□□□□ -0.99
TCN1-205ENST00000534531 TIMELESSQ9UNS1 1208 aa8.85□□□□□ -0.99
TCN1-205ENST00000534531 RAB6BQ9NRW1 208 aa8.84□□□□□ -0.99
TCN1-205ENST00000534531 POU4F2Q12837 409 aa8.83□□□□□ -1
TCN1-205ENST00000534531 RNFT1Q5M7Z0 435 aa8.83□□□□□ -1
TCN1-205ENST00000534531 ERICH6Q7L0X2 663 aa8.83□□□□□ -1
TCN1-205ENST00000534531 RNF135Q8IUD6 432 aa8.83□□□□□ -1
TCN1-205ENST00000534531 PHTF2Q8N3S3 785 aa8.83□□□□□ -1
TCN1-205ENST00000534531 GRIP2Q9C0E4 1043 aa8.83□□□□□ -1
TCN1-205ENST00000534531 DOLKQ9UPQ8 538 aa8.83□□□□□ -1
TCN1-205ENST00000534531 USP4Q13107 963 aa8.82□□□□□ -1
TCN1-205ENST00000534531 TSGA10IPQ3SY00 556 aa8.82□□□□□ -1
TCN1-205ENST00000534531 CNKSR1Q969H4 720 aa8.82□□□□□ -1
TCN1-205ENST00000534531 ESYT1Q9BSJ8 1104 aa8.82□□□□□ -1
TCN1-205ENST00000534531 CUEDC1Q9NWM3 386 aaPredicted RBP8.82□□□□□ -1
TCN1-205ENST00000534531 SEMA3FQ13275 785 aa8.81□□□□□ -1
TCN1-205ENST00000534531 RIPOR1Q6ZS17 1223 aa8.81□□□□□ -1
TCN1-205ENST00000534531 DYRK1BQ9Y463 629 aa8.81□□□□□ -1
TCN1-205ENST00000534531 IL2RAP01589 272 aa8.8□□□□□ -1
TCN1-205ENST00000534531 NBPF10Q6P3W6 841 aaKnown RBP8.8□□□□□ -1
TCN1-205ENST00000534531 NBPF15Q8N660 670 aa8.8□□□□□ -1
TCN1-205ENST00000534531 GMCL1Q96IK5 515 aa8.8□□□□□ -1
TCN1-205ENST00000534531 SPATA31C2B4DYI2 1134 aa8.79□□□□□ -1
TCN1-205ENST00000534531 OXLD1Q5BKU9 147 aa8.79□□□□□ -1
TCN1-205ENST00000534531 WDR44Q5JSH3 913 aa8.79□□□□□ -1
TCN1-205ENST00000534531 TAS1R3Q7RTX0 852 aa8.79□□□□□ -1
TCN1-205ENST00000534531 TRIM22Q8IYM9 498 aa8.79□□□□□ -1
TCN1-205ENST00000534531 SIRT1Q96EB6 747 aa8.79□□□□□ -1
TCN1-205ENST00000534531 GAS2L1Q99501 681 aaPredicted RBP8.79□□□□□ -1
TCN1-205ENST00000534531 H7C1W4 665 aa8.78□□□□□ -1
TCN1-205ENST00000534531 WASLO00401 505 aaPredicted RBP8.78□□□□□ -1
TCN1-205ENST00000534531 SOX11P35716 441 aa8.78□□□□□ -1
TCN1-205ENST00000534531 CENPCQ03188 943 aa8.78□□□□□ -1
TCN1-205ENST00000534531 ESCO1Q5FWF5 840 aa8.78□□□□□ -1
TCN1-205ENST00000534531 XAGE2Q96GT9 111 aa8.78□□□□□ -1
TCN1-205ENST00000534531 TIMMDC1Q9NPL8 285 aa8.78□□□□□ -1
TCN1-205ENST00000534531 COG6Q9Y2V7 657 aa8.78□□□□□ -1
TCN1-205ENST00000534531 SLURP2P0DP57 97 aa8.77□□□□□ -1.01
TCN1-205ENST00000534531 GTF2E1P29083 439 aaPredicted RBP8.77□□□□□ -1.01
TCN1-205ENST00000534531 DBN1Q16643 649 aa8.77□□□□□ -1.01
TCN1-205ENST00000534531 FOXR1Q6PIV2 292 aa8.77□□□□□ -1.01
TCN1-205ENST00000534531 ZNF837Q96EG3 531 aaPredicted RBP8.77□□□□□ -1.01
TCN1-205ENST00000534531 ZSCAN10Q96SZ4 725 aaPredicted RBP8.77□□□□□ -1.01
TCN1-205ENST00000534531 CHIC2Q9UKJ5 165 aa8.77□□□□□ -1.01
TCN1-205ENST00000534531 MAP7D1Q3KQU3 841 aa8.76□□□□□ -1.01
TCN1-205ENST00000534531 WWC1Q8IX03 1113 aa8.76□□□□□ -1.01
TCN1-205ENST00000534531 SVOPQ8N4V2 548 aa8.76□□□□□ -1.01
TCN1-205ENST00000534531 UNC13AQ9UPW8 1703 aa8.76□□□□□ -1.01
TCN1-205ENST00000534531 MYO15BQ96JP2 1530 aa8.75□□□□□ -1.01
TCN1-205ENST00000534531 GNASQ5JWF2 1037 aa8.75□□□□□ -1.01
TCN1-205ENST00000534531 ZNF385CQ66K41 422 aaPredicted RBP8.75□□□□□ -1.01
TCN1-205ENST00000534531 TMEM214Q6NUQ4 689 aaKnown RBP8.75□□□□□ -1.01
TCN1-205ENST00000534531 PLPP7Q8NBV4 271 aa8.75□□□□□ -1.01
TCN1-205ENST00000534531 HRH3Q9Y5N1 445 aa8.75□□□□□ -1.01
TCN1-205ENST00000534531 GPR25O00155 361 aa8.74□□□□□ -1.01
TCN1-205ENST00000534531 F11P03951 625 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms