RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 SULT6B1Q6IMI4 303 aa32.46■■■□□ 2.79
SIPA1-210ENST00000534406 SOCS7O14512 581 aa32.45■■■□□ 2.79
SIPA1-210ENST00000534406 AEBP1Q8IUX7 1158 aa32.45■■■□□ 2.79
SIPA1-210ENST00000534406 ZCRB1Q8TBF4 217 aaKnown RBP32.45■■■□□ 2.79
SIPA1-210ENST00000534406 U2SURPO15042 1029 aaKnown RBP32.44■■■□□ 2.78
SIPA1-210ENST00000534406 MARCH10Q8NA82 808 aaPredicted RBP32.44■■■□□ 2.78
SIPA1-210ENST00000534406 NUDCQ9Y266 331 aa32.44■■■□□ 2.78
SIPA1-210ENST00000534406 ANP32CO43423 234 aa32.42■■■□□ 2.78
SIPA1-210ENST00000534406 FAM196AQ6ZSG2 479 aa32.42■■■□□ 2.78
SIPA1-210ENST00000534406 PCDH11XQ9BZA7 1347 aa32.4■■■□□ 2.78
SIPA1-210ENST00000534406 PCDH11YQ9BZA8 1340 aa32.4■■■□□ 2.78
SIPA1-210ENST00000534406 BCL9O00512 1426 aa32.4■■■□□ 2.78
SIPA1-210ENST00000534406 HMOX1P09601 288 aa32.39■■■□□ 2.78
SIPA1-210ENST00000534406 DDX54Q8TDD1 881 aaKnown RBP32.38■■■□□ 2.77
SIPA1-210ENST00000534406 SPG7Q9UQ90 795 aa32.38■■■□□ 2.77
SIPA1-210ENST00000534406 SBF2Q86WG5 1849 aa32.37■■■□□ 2.77
SIPA1-210ENST00000534406 UPF1Q92900 1129 aaKnown RBP eCLIP32.37■■■□□ 2.77
SIPA1-210ENST00000534406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.37■■■□□ 2.77
SIPA1-210ENST00000534406 TNS1Q9HBL0 1735 aaKnown RBP32.34■■■□□ 2.77
SIPA1-210ENST00000534406 U2AF1L5P0DN76 240 aaPredicted RBP32.33■■■□□ 2.77
SIPA1-210ENST00000534406 U2AF1Q01081 240 aaKnown RBP eCLIP32.33■■■□□ 2.77
SIPA1-210ENST00000534406 PLEKHO1Q53GL0 409 aaPredicted RBP32.32■■■□□ 2.76
SIPA1-210ENST00000534406 NHSQ6T4R5 1651 aa32.31■■■□□ 2.76
SIPA1-210ENST00000534406 AMOTQ4VCS5 1084 aa32.31■■■□□ 2.76
SIPA1-210ENST00000534406 DOT1LQ8TEK3 1739 aa32.31■■■□□ 2.76
SIPA1-210ENST00000534406 CYP27B1O15528 508 aa32.3■■■□□ 2.76
SIPA1-210ENST00000534406 CCDC125Q86Z20 511 aa32.3■■■□□ 2.76
SIPA1-210ENST00000534406 TRIM37O94972 964 aa32.28■■■□□ 2.76
SIPA1-210ENST00000534406 RSPH6AQ9H0K4 717 aa32.28■■■□□ 2.76
SIPA1-210ENST00000534406 KAT6BQ8WYB5 2073 aa32.27■■■□□ 2.76
SIPA1-210ENST00000534406 SF3B2Q13435 895 aaKnown RBP32.26■■■□□ 2.75
SIPA1-210ENST00000534406 ZNF530Q6P9A1 599 aaPredicted RBP32.26■■■□□ 2.75
SIPA1-210ENST00000534406 PRKAR2BP31323 418 aa32.25■■■□□ 2.75
SIPA1-210ENST00000534406 IFNL2Q8IZJ0 200 aa32.25■■■□□ 2.75
SIPA1-210ENST00000534406 FCHSD2O94868 740 aa32.24■■■□□ 2.75
SIPA1-210ENST00000534406 PHKG2P15735 406 aa32.24■■■□□ 2.75
SIPA1-210ENST00000534406 TOGARAM1Q9Y4F4 1720 aa32.23■■■□□ 2.75
SIPA1-210ENST00000534406 ACSBG1Q96GR2 724 aa32.22■■■□□ 2.75
SIPA1-210ENST00000534406 C1orf141Q5JVX7 400 aa32.21■■■□□ 2.75
SIPA1-210ENST00000534406 BCL11BQ9C0K0 894 aaPredicted RBP32.21■■■□□ 2.75
SIPA1-210ENST00000534406 WDR43Q15061 677 aaKnown RBP eCLIP32.2■■■□□ 2.75
SIPA1-210ENST00000534406 NKX1-1Q15270 411 aaPredicted RBP32.2■■■□□ 2.75
SIPA1-210ENST00000534406 HSP90AB1P08238 724 aaKnown RBP32.18■■■□□ 2.74
SIPA1-210ENST00000534406 BTAF1O14981 1849 aa32.18■■■□□ 2.74
SIPA1-210ENST00000534406 KCNQ2O43526 872 aa32.17■■■□□ 2.74
SIPA1-210ENST00000534406 BAG6P46379 1132 aa32.17■■■□□ 2.74
SIPA1-210ENST00000534406 MTHFSDQ2M296 383 aaKnown RBP32.17■■■□□ 2.74
SIPA1-210ENST00000534406 GAS2L2Q8NHY3 880 aa32.16■■■□□ 2.74
SIPA1-210ENST00000534406 ITGB4P16144 1822 aa32.15■■■□□ 2.74
SIPA1-210ENST00000534406 AKAP4Q5JQC9 854 aa32.15■■■□□ 2.74
SIPA1-210ENST00000534406 PNNQ9H307 717 aaKnown RBP32.15■■■□□ 2.74
SIPA1-210ENST00000534406 KDM6AO15550 1401 aaPredicted RBP32.15■■■□□ 2.74
SIPA1-210ENST00000534406 APBA3O96018 575 aa32.14■■■□□ 2.74
SIPA1-210ENST00000534406 NEFMP07197 916 aa32.14■■■□□ 2.74
SIPA1-210ENST00000534406 PTF1AQ7RTS3 328 aa32.14■■■□□ 2.74
SIPA1-210ENST00000534406 SYTL4Q96C24 671 aaPredicted RBP32.14■■■□□ 2.74
SIPA1-210ENST00000534406 RGPD3A6NKT7 1758 aaPredicted RBP32.14■■■□□ 2.74
SIPA1-210ENST00000534406 RGPD4Q7Z3J3 1758 aa32.14■■■□□ 2.74
SIPA1-210ENST00000534406 PRIM1P49642 420 aaKnown RBP32.13■■■□□ 2.73
SIPA1-210ENST00000534406 CCDC184Q52MB2 194 aa32.13■■■□□ 2.73
SIPA1-210ENST00000534406 DCAF5Q96JK2 942 aa32.13■■■□□ 2.73
SIPA1-210ENST00000534406 PHACTR3Q96KR7 559 aa32.13■■■□□ 2.73
SIPA1-210ENST00000534406 MRS2Q9HD23 443 aa32.13■■■□□ 2.73
SIPA1-210ENST00000534406 SCN11AQ9UI33 1791 aa32.13■■■□□ 2.73
SIPA1-210ENST00000534406 VIRMAQ69YN4 1812 aaKnown RBP32.12■■■□□ 2.73
SIPA1-210ENST00000534406 MAP3K5Q99683 1374 aa32.11■■■□□ 2.73
SIPA1-210ENST00000534406 MAPK8IP3Q9UPT6 1336 aa32.11■■■□□ 2.73
SIPA1-210ENST00000534406 DIEXFQ68CQ4 756 aaKnown RBP32.11■■■□□ 2.73
SIPA1-210ENST00000534406 DEFB132Q7Z7B7 95 aa32.11■■■□□ 2.73
SIPA1-210ENST00000534406 ADAMTS7Q9UKP4 1686 aa32.09■■■□□ 2.73
SIPA1-210ENST00000534406 PLEKHF1Q96S99 279 aa32.09■■■□□ 2.73
SIPA1-210ENST00000534406 MPRIPQ6WCQ1 1025 aa32.07■■■□□ 2.72
SIPA1-210ENST00000534406 ADAMTS8Q9UP79 889 aa32.07■■■□□ 2.72
SIPA1-210ENST00000534406 EN1Q05925 392 aaPredicted RBP32.06■■■□□ 2.72
SIPA1-210ENST00000534406 ERVV-2B6SEH9 535 aa32.05■■■□□ 2.72
SIPA1-210ENST00000534406 TMOD3Q9NYL9 352 aa32.05■■■□□ 2.72
SIPA1-210ENST00000534406 RREB1Q92766 1687 aa32.05■■■□□ 2.72
SIPA1-210ENST00000534406 MRC1P22897 1456 aa32.04■■■□□ 2.72
SIPA1-210ENST00000534406 GNAT3A8MTJ3 354 aa32.04■■■□□ 2.72
SIPA1-210ENST00000534406 DLG5Q8TDM6 1919 aa32.03■■■□□ 2.72
SIPA1-210ENST00000534406 PLSCR1O15162 318 aa32.03■■■□□ 2.72
SIPA1-210ENST00000534406 CCDC146Q8IYE0 955 aa32.02■■■□□ 2.72
SIPA1-210ENST00000534406 RNMTO43148 476 aaKnown RBP32.01■■■□□ 2.71
SIPA1-210ENST00000534406 CAMKK2Q96RR4 588 aa32.01■■■□□ 2.71
SIPA1-210ENST00000534406 CABP4P57796 275 aa32■■■□□ 2.71
SIPA1-210ENST00000534406 NFE2L2Q16236 605 aa32■■■□□ 2.71
SIPA1-210ENST00000534406 EZH2Q15910 746 aaKnown RBP31.99■■■□□ 2.71
SIPA1-210ENST00000534406 PNISRQ8TF01 805 aaKnown RBP31.99■■■□□ 2.71
SIPA1-210ENST00000534406 PIGBQ92521 554 aa31.99■■■□□ 2.71
SIPA1-210ENST00000534406 RUNDC1Q96C34 613 aa31.99■■■□□ 2.71
SIPA1-210ENST00000534406 LY75O60449 1722 aa31.98■■■□□ 2.71
SIPA1-210ENST00000534406 NUP188Q5SRE5 1749 aa31.98■■■□□ 2.71
SIPA1-210ENST00000534406 LGR6Q9HBX8 967 aa31.98■■■□□ 2.71
SIPA1-210ENST00000534406 RTF1Q92541 710 aaKnown RBP31.96■■■□□ 2.71
SIPA1-210ENST00000534406 SLC52A2Q9HAB3 445 aa31.95■■■□□ 2.71
SIPA1-210ENST00000534406 CEMIPQ8WUJ3 1361 aa31.94■■■□□ 2.7
SIPA1-210ENST00000534406 PALLDQ8WX93 1383 aa31.94■■■□□ 2.7
SIPA1-210ENST00000534406 SMARCC1Q92922 1105 aaPredicted RBP31.94■■■□□ 2.7
SIPA1-210ENST00000534406 SIPA1L3O60292 1781 aaPredicted RBP31.94■■■□□ 2.7
SIPA1-210ENST00000534406 CCER2I3L3R5 266 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms