RNA–Protein interactions for RNA: ENST00000534305.1

RELA-224, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 3

Gene RELA, Length 666 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-224ENST00000534305 A0A1W2PP64 1363 aa23.79■■□□□ 1.4
RELA-224ENST00000534305 PUS7Q96PZ0 661 aaKnown RBP23.77■■□□□ 1.4
RELA-224ENST00000534305 TAF1LQ8IZX4 1826 aa23.76■■□□□ 1.39
RELA-224ENST00000534305 CARD11Q9BXL7 1154 aa23.76■■□□□ 1.39
RELA-224ENST00000534305 CCNL1Q9UK58 526 aaPredicted RBP23.76■■□□□ 1.39
RELA-224ENST00000534305 RTL1A6NKG5 1358 aa23.76■■□□□ 1.39
RELA-224ENST00000534305 USP47Q96K76 1375 aa23.76■■□□□ 1.39
RELA-224ENST00000534305 NSD2O96028 1365 aa23.75■■□□□ 1.39
RELA-224ENST00000534305 PRIM1P49642 420 aaKnown RBP23.74■■□□□ 1.39
RELA-224ENST00000534305 IFFO2Q5TF58 517 aa23.74■■□□□ 1.39
RELA-224ENST00000534305 NLGN2Q8NFZ4 835 aa23.74■■□□□ 1.39
RELA-224ENST00000534305 SMG6Q86US8 1419 aaKnown RBP23.74■■□□□ 1.39
RELA-224ENST00000534305 LTV1Q96GA3 475 aaPredicted RBP23.73■■□□□ 1.39
RELA-224ENST00000534305 COG3Q96JB2 828 aa23.73■■□□□ 1.39
RELA-224ENST00000534305 SLC12A5Q9H2X9 1139 aa23.73■■□□□ 1.39
RELA-224ENST00000534305 CGNL1Q0VF96 1302 aa23.73■■□□□ 1.39
RELA-224ENST00000534305 MSH5O43196 834 aa23.72■■□□□ 1.39
RELA-224ENST00000534305 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
RELA-224ENST00000534305 ZCRB1Q8TBF4 217 aaKnown RBP23.72■■□□□ 1.39
RELA-224ENST00000534305 SIN3AQ96ST3 1273 aa23.72■■□□□ 1.39
RELA-224ENST00000534305 MEGF6O75095 1541 aa23.72■■□□□ 1.39
RELA-224ENST00000534305 AMPHP49418 695 aa23.71■■□□□ 1.39
RELA-224ENST00000534305 HOXC9P31274 260 aa23.7■■□□□ 1.38
RELA-224ENST00000534305 FLAD1Q8NFF5 587 aa23.7■■□□□ 1.38
RELA-224ENST00000534305 ATP10DQ9P241 1426 aa23.69■■□□□ 1.38
RELA-224ENST00000534305 MAP3K19Q56UN5 1328 aa23.69■■□□□ 1.38
RELA-224ENST00000534305 SLC24A1O60721 1099 aa23.69■■□□□ 1.38
RELA-224ENST00000534305 CEP350Q5VT06 3117 aa23.68■■□□□ 1.38
RELA-224ENST00000534305 YBX3P16989 372 aaKnown RBP eCLIP23.67■■□□□ 1.384e-7■■■■□ 22.3
RELA-224ENST00000534305 KCNQ4P56696 695 aa23.67■■□□□ 1.38
RELA-224ENST00000534305 NSD3Q9BZ95 1437 aa23.67■■□□□ 1.38
RELA-224ENST00000534305 CD2APQ9Y5K6 639 aa23.66■■□□□ 1.38
RELA-224ENST00000534305 RAPGEF4Q8WZA2 1011 aa23.65■■□□□ 1.38
RELA-224ENST00000534305 ITGB4P16144 1822 aa23.65■■□□□ 1.38
RELA-224ENST00000534305 KIF20BQ96Q89 1820 aa23.65■■□□□ 1.38
RELA-224ENST00000534305 COL23A1Q86Y22 540 aaPredicted RBP23.64■■□□□ 1.37
RELA-224ENST00000534305 GPBP1L1Q9HC44 474 aaPredicted RBP23.64■■□□□ 1.37
RELA-224ENST00000534305 C4BP0C0L5 1744 aa23.64■■□□□ 1.37
RELA-224ENST00000534305 UBR3Q6ZT12 1888 aa23.64■■□□□ 1.37
RELA-224ENST00000534305 PCDH11XQ9BZA7 1347 aa23.63■■□□□ 1.37
RELA-224ENST00000534305 PCDH11YQ9BZA8 1340 aa23.63■■□□□ 1.37
RELA-224ENST00000534305 ADCY9O60503 1353 aa23.62■■□□□ 1.37
RELA-224ENST00000534305 MSL1Q68DK7 614 aa23.61■■□□□ 1.37
RELA-224ENST00000534305 PALLDQ8WX93 1383 aa23.61■■□□□ 1.37
RELA-224ENST00000534305 PKD1L3Q7Z443 1732 aa23.61■■□□□ 1.37
RELA-224ENST00000534305 TATP17735 454 aaPredicted RBP23.6■■□□□ 1.37
RELA-224ENST00000534305 TONSLQ96HA7 1378 aa23.6■■□□□ 1.37
RELA-224ENST00000534305 TOGARAM1Q9Y4F4 1720 aa23.59■■□□□ 1.37
RELA-224ENST00000534305 KIF24Q5T7B8 1368 aa23.58■■□□□ 1.37
RELA-224ENST00000534305 SMARCC1Q92922 1105 aaPredicted RBP23.57■■□□□ 1.36
RELA-224ENST00000534305 AK7Q96M32 723 aa23.57■■□□□ 1.36
RELA-224ENST00000534305 HSPA6P17066 643 aa23.55■■□□□ 1.36
RELA-224ENST00000534305 NBPF6Q5VWK0 638 aa23.55■■□□□ 1.36
RELA-224ENST00000534305 NBPF4Q96M43 638 aa23.55■■□□□ 1.36
RELA-224ENST00000534305 INSRP06213 1382 aa23.54■■□□□ 1.36
RELA-224ENST00000534305 FLT4P35916 1363 aa23.54■■□□□ 1.36
RELA-224ENST00000534305 CICQ96RK0 1608 aaPredicted RBP23.54■■□□□ 1.36
RELA-224ENST00000534305 RRS1Q15050 365 aaKnown RBP23.52■■□□□ 1.36
RELA-224ENST00000534305 USHBP1Q8N6Y0 703 aa23.52■■□□□ 1.36
RELA-224ENST00000534305 TESK2Q96S53 571 aa23.51■■□□□ 1.35
RELA-224ENST00000534305 MAP2P11137 1827 aaKnown RBP23.51■■□□□ 1.35
RELA-224ENST00000534305 KIF13BQ9NQT8 1826 aa23.51■■□□□ 1.35
RELA-224ENST00000534305 IGSF1Q8N6C5 1336 aa23.51■■□□□ 1.35
RELA-224ENST00000534305 MPRIPQ6WCQ1 1025 aa23.5■■□□□ 1.35
RELA-224ENST00000534305 SSFA2P28290 1259 aa23.49■■□□□ 1.35
RELA-224ENST00000534305 ANKRD26Q9UPS8 1709 aa23.49■■□□□ 1.35
RELA-224ENST00000534305 ZNF526Q8TF50 670 aaPredicted RBP23.48■■□□□ 1.35
RELA-224ENST00000534305 ST20-MTHFSA0A0A6YYL1 179 aa23.47■■□□□ 1.35
RELA-224ENST00000534305 FBLN1P23142 703 aa23.46■■□□□ 1.35
RELA-224ENST00000534305 GGNBP2Q9H3C7 697 aa23.46■■□□□ 1.35
RELA-224ENST00000534305 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.45■■□□□ 1.34
RELA-224ENST00000534305 FYB1O15117 783 aa23.45■■□□□ 1.34
RELA-224ENST00000534305 PHF14O94880 888 aa23.45■■□□□ 1.34
RELA-224ENST00000534305 NCAPD2Q15021 1401 aa23.44■■□□□ 1.34
RELA-224ENST00000534305 TMF1P82094 1093 aa23.44■■□□□ 1.34
RELA-224ENST00000534305 CYP27B1O15528 508 aa23.43■■□□□ 1.34
RELA-224ENST00000534305 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
RELA-224ENST00000534305 HSP90AB2PQ58FF8 381 aa23.42■■□□□ 1.34
RELA-224ENST00000534305 SPG7Q9UQ90 795 aa23.42■■□□□ 1.34
RELA-224ENST00000534305 ZNF831Q5JPB2 1677 aa23.41■■□□□ 1.34
RELA-224ENST00000534305 KIAA1551Q9HCM1 1747 aa23.4■■□□□ 1.34
RELA-224ENST00000534305 LOC102724428A0A0B4J2F2 783 aa23.4■■□□□ 1.34
RELA-224ENST00000534305 SIK1P57059 783 aa23.4■■□□□ 1.34
RELA-224ENST00000534305 N4BP2Q86UW6 1770 aaPredicted RBP23.4■■□□□ 1.34
RELA-224ENST00000534305 APLP1P51693 650 aa23.39■■□□□ 1.33
RELA-224ENST00000534305 NKX1-1Q15270 411 aaPredicted RBP23.39■■□□□ 1.33
RELA-224ENST00000534305 PIGBQ92521 554 aa23.39■■□□□ 1.33
RELA-224ENST00000534305 TMOD3Q9NYL9 352 aa23.39■■□□□ 1.33
RELA-224ENST00000534305 PLEKHG2Q9H7P9 1386 aa23.39■■□□□ 1.33
RELA-224ENST00000534305 BRCA1P38398 1863 aaKnown RBP23.39■■□□□ 1.33
RELA-224ENST00000534305 KIF3CO14782 793 aa23.37■■□□□ 1.33
RELA-224ENST00000534305 GNPATO15228 680 aa23.37■■□□□ 1.33
RELA-224ENST00000534305 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.37■■□□□ 1.33
RELA-224ENST00000534305 ARFGEF1Q9Y6D6 1849 aa23.37■■□□□ 1.33
RELA-224ENST00000534305 PXDNLA1KZ92 1463 aa23.36■■□□□ 1.33
RELA-224ENST00000534305 AMIGO3Q86WK7 504 aa23.35■■□□□ 1.33
RELA-224ENST00000534305 LINC00116Q8NCU8 138 aa23.35■■□□□ 1.33
RELA-224ENST00000534305 WWC3Q9ULE0 1092 aa23.35■■□□□ 1.33
RELA-224ENST00000534305 COL5A3P25940 1745 aaPredicted RBP23.35■■□□□ 1.33
RELA-224ENST00000534305 C4AP0C0L4 1744 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms