RNA–Protein interactions for RNA: ENST00000533928.1

USP33-218, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 4

Gene USP33, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-218ENST00000533928 MEIOBQ8N635 442 aa7.07□□□□□ -1.28
USP33-218ENST00000533928 GPKOWQ92917 476 aaPredicted RBP eCLIP7.07□□□□□ -1.28
USP33-218ENST00000533928 CARD14Q9BXL6 1004 aa7.07□□□□□ -1.28
USP33-218ENST00000533928 ADCY10Q96PN6 1610 aa7.07□□□□□ -1.28
USP33-218ENST00000533928 ABCC2Q92887 1545 aa7.06□□□□□ -1.28
USP33-218ENST00000533928 KDM4CQ9H3R0 1056 aa7.06□□□□□ -1.28
USP33-218ENST00000533928 EMILIN1Q9Y6C2 1016 aa7.06□□□□□ -1.28
USP33-218ENST00000533928 SAMD9Q5K651 1589 aa7.06□□□□□ -1.28
USP33-218ENST00000533928 PTPRGP23470 1445 aa7.05□□□□□ -1.28
USP33-218ENST00000533928 VSIG8P0DPA2 414 aa7.05□□□□□ -1.28
USP33-218ENST00000533928 ERFEQ4G0M1 354 aa7.05□□□□□ -1.28
USP33-218ENST00000533928 CCDC116Q8IYX3 515 aa7.05□□□□□ -1.28
USP33-218ENST00000533928 KDM5BQ9UGL1 1544 aa7.05□□□□□ -1.28
USP33-218ENST00000533928 PLB1Q6P1J6 1458 aa7.04□□□□□ -1.28
USP33-218ENST00000533928 SOS2Q07890 1332 aaPredicted RBP7.04□□□□□ -1.28
USP33-218ENST00000533928 GLI2P10070 1586 aa7.04□□□□□ -1.28
USP33-218ENST00000533928 FAM9AQ8IZU1 332 aaPredicted RBP7.04□□□□□ -1.28
USP33-218ENST00000533928 LRRN4Q8WUT4 740 aa7.04□□□□□ -1.28
USP33-218ENST00000533928 TSEN34Q9BSV6 310 aaKnown RBP7.04□□□□□ -1.28
USP33-218ENST00000533928 FAM117AQ9C073 453 aa7.04□□□□□ -1.28
USP33-218ENST00000533928 ABCC10Q5T3U5 1492 aa7.04□□□□□ -1.28
USP33-218ENST00000533928 KIF13AQ9H1H9 1805 aa7.04□□□□□ -1.28
USP33-218ENST00000533928 DIP2BQ9P265 1576 aa7.03□□□□□ -1.28
USP33-218ENST00000533928 UACAQ9BZF9 1416 aa7.03□□□□□ -1.28
USP33-218ENST00000533928 PPFIA3O75145 1194 aa7.03□□□□□ -1.28
USP33-218ENST00000533928 SKIV2LQ15477 1246 aaKnown RBP7.03□□□□□ -1.28
USP33-218ENST00000533928 PDXDC2PQ6P474 469 aa7.03□□□□□ -1.28
USP33-218ENST00000533928 ARHGAP9Q9BRR9 750 aa7.03□□□□□ -1.28
USP33-218ENST00000533928 FKBPLQ9UIM3 349 aa7.03□□□□□ -1.28
USP33-218ENST00000533928 DNMT3LQ9UJW3 386 aa7.03□□□□□ -1.28
USP33-218ENST00000533928 PPP1R26Q5T8A7 1209 aaPredicted RBP7.02□□□□□ -1.29
USP33-218ENST00000533928 PROCA1Q8NCQ7 364 aaPredicted RBP7.02□□□□□ -1.29
USP33-218ENST00000533928 DDRGK1Q96HY6 314 aa7.02□□□□□ -1.29
USP33-218ENST00000533928 PGPEP1Q9NXJ5 209 aa7.02□□□□□ -1.29
USP33-218ENST00000533928 ATP1B4Q9UN42 357 aaPredicted RBP7.02□□□□□ -1.29
USP33-218ENST00000533928 ABCA8O94911 1581 aa7.02□□□□□ -1.29
USP33-218ENST00000533928 NR6A1Q15406 480 aa7.01□□□□□ -1.29
USP33-218ENST00000533928 SH3D19Q5HYK7 790 aa7.01□□□□□ -1.29
USP33-218ENST00000533928 FBXO31Q5XUX0 539 aaPredicted RBP7.01□□□□□ -1.29
USP33-218ENST00000533928 ZBTB33Q86T24 672 aa7.01□□□□□ -1.29
USP33-218ENST00000533928 TTLL8A6PVC2 850 aa7□□□□□ -1.29
USP33-218ENST00000533928 CBLBQ13191 982 aa7□□□□□ -1.29
USP33-218ENST00000533928 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7□□□□□ -1.29
USP33-218ENST00000533928 SLC10A4Q96EP9 437 aa7□□□□□ -1.29
USP33-218ENST00000533928 KCTD15Q96SI1 283 aaPredicted RBP7□□□□□ -1.29
USP33-218ENST00000533928 FIGNL2A6NMB9 653 aa6.99□□□□□ -1.29
USP33-218ENST00000533928 PPP2R2DQ66LE6 453 aa6.99□□□□□ -1.29
USP33-218ENST00000533928 Q6ZVU0 165 aa6.99□□□□□ -1.29
USP33-218ENST00000533928 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.99□□□□□ -1.29
USP33-218ENST00000533928 CDV3Q9UKY7 258 aaKnown RBP6.99□□□□□ -1.29
USP33-218ENST00000533928 TEX14Q8IWB6 1497 aa6.98□□□□□ -1.29
USP33-218ENST00000533928 ZCCHC11Q5TAX3 1644 aaKnown RBP6.98□□□□□ -1.29
USP33-218ENST00000533928 CFAP43Q8NDM7 1665 aa6.98□□□□□ -1.29
USP33-218ENST00000533928 PTK2Q05397 1052 aa6.98□□□□□ -1.29
USP33-218ENST00000533928 ZC3H4Q9UPT8 1303 aaKnown RBP6.98□□□□□ -1.29
USP33-218ENST00000533928 SPINT1O43278 529 aa6.97□□□□□ -1.29
USP33-218ENST00000533928 AP1G2O75843 785 aa6.97□□□□□ -1.29
USP33-218ENST00000533928 PTSQ03393 145 aa6.97□□□□□ -1.29
USP33-218ENST00000533928 DHX9Q08211 1270 aaKnown RBP6.97□□□□□ -1.29
USP33-218ENST00000533928 FMN1Q68DA7 1419 aa6.97□□□□□ -1.29
USP33-218ENST00000533928 RAPGEF6Q8TEU7 1601 aa6.97□□□□□ -1.29
USP33-218ENST00000533928 MAP3K4Q9Y6R4 1608 aa6.97□□□□□ -1.29
USP33-218ENST00000533928 WDR7Q9Y4E6 1490 aa6.97□□□□□ -1.29
USP33-218ENST00000533928 ASXL2Q76L83 1435 aa6.96□□□□□ -1.3
USP33-218ENST00000533928 GPR161Q8N6U8 529 aaKnown RBP6.96□□□□□ -1.3
USP33-218ENST00000533928 AGBL1Q96MI9 1066 aa6.96□□□□□ -1.3
USP33-218ENST00000533928 OCSTAMPQ9BR26 566 aa6.96□□□□□ -1.3
USP33-218ENST00000533928 GPSM3Q9Y4H4 160 aa6.96□□□□□ -1.3
USP33-218ENST00000533928 PHLDB1Q86UU1 1377 aa6.95□□□□□ -1.3
USP33-218ENST00000533928 INTS6LQ5JSJ4 861 aaKnown RBP6.95□□□□□ -1.3
USP33-218ENST00000533928 ADAM32Q8TC27 787 aa6.95□□□□□ -1.3
USP33-218ENST00000533928 EPS8L1Q8TE68 723 aa6.95□□□□□ -1.3
USP33-218ENST00000533928 EPRSP07814 1512 aaKnown RBP6.95□□□□□ -1.3
USP33-218ENST00000533928 MAGI3Q5TCQ9 1506 aa6.95□□□□□ -1.3
USP33-218ENST00000533928 RELBQ01201 579 aa6.94□□□□□ -1.3
USP33-218ENST00000533928 CCDC155Q8N6L0 562 aa6.94□□□□□ -1.3
USP33-218ENST00000533928 PNMA1Q8ND90 353 aa6.94□□□□□ -1.3
USP33-218ENST00000533928 HECW1Q76N89 1606 aa6.94□□□□□ -1.3
USP33-218ENST00000533928 CTSOP43234 321 aaPredicted RBP6.93□□□□□ -1.3
USP33-218ENST00000533928 KRT76Q01546 638 aa6.93□□□□□ -1.3
USP33-218ENST00000533928 CNTNAP3BQ96NU0 1288 aa6.93□□□□□ -1.3
USP33-218ENST00000533928 INSM2Q96T92 566 aaPredicted RBP6.93□□□□□ -1.3
USP33-218ENST00000533928 CNTNAP3Q9BZ76 1288 aa6.93□□□□□ -1.3
USP33-218ENST00000533928 HMX1Q9NP08 348 aaPredicted RBP6.93□□□□□ -1.3
USP33-218ENST00000533928 CFAP74Q9C0B2 1584 aa6.93□□□□□ -1.3
USP33-218ENST00000533928 ABCA9Q8IUA7 1624 aa6.93□□□□□ -1.3
USP33-218ENST00000533928 ARAP3Q8WWN8 1544 aa6.92□□□□□ -1.3
USP33-218ENST00000533928 KDM6BO15054 1643 aa6.92□□□□□ -1.3
USP33-218ENST00000533928 SLC35F4A4IF30 521 aa6.92□□□□□ -1.3
USP33-218ENST00000533928 RAB15P59190 212 aa6.92□□□□□ -1.3
USP33-218ENST00000533928 NEUROD2Q15784 382 aa6.92□□□□□ -1.3
USP33-218ENST00000533928 NBPF20Q3BBV1 942 aa6.92□□□□□ -1.3
USP33-218ENST00000533928 NANOS1Q8WY41 292 aaKnown RBP6.92□□□□□ -1.3
USP33-218ENST00000533928 ZNF395Q9H8N7 513 aaPredicted RBP6.92□□□□□ -1.3
USP33-218ENST00000533928 TMPRSS4Q9NRS4 437 aa6.92□□□□□ -1.3
USP33-218ENST00000533928 PPRC1Q5VV67 1664 aaKnown RBP6.92□□□□□ -1.3
USP33-218ENST00000533928 USP17L8P0C7I0 530 aa6.91□□□□□ -1.3
USP33-218ENST00000533928 DZIP3Q86Y13 1208 aaKnown RBP6.91□□□□□ -1.3
USP33-218ENST00000533928 COL25A1Q9BXS0 654 aaPredicted RBP6.91□□□□□ -1.3
USP33-218ENST00000533928 POLMQ9NP87 494 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms