RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 PNPLA7Q6ZV29 1317 aa14.47□□□□□ -0.09
CLP1-206ENST00000533905 PRIM1P49642 420 aaKnown RBP14.47□□□□□ -0.09
CLP1-206ENST00000533905 COG3Q96JB2 828 aa14.47□□□□□ -0.09
CLP1-206ENST00000533905 PUS7Q96PZ0 661 aaKnown RBP14.47□□□□□ -0.09
CLP1-206ENST00000533905 KIF20BQ96Q89 1820 aa14.46□□□□□ -0.09
CLP1-206ENST00000533905 HSP90AB2PQ58FF8 381 aa14.46□□□□□ -0.09
CLP1-206ENST00000533905 SMIM5Q71RC9 77 aa14.46□□□□□ -0.09
CLP1-206ENST00000533905 AMIGO3Q86WK7 504 aa14.46□□□□□ -0.09
CLP1-206ENST00000533905 LY75O60449 1722 aa14.46□□□□□ -0.1
CLP1-206ENST00000533905 CEP350Q5VT06 3117 aa14.46□□□□□ -0.1
CLP1-206ENST00000533905 SYT17Q9BSW7 474 aa14.45□□□□□ -0.1
CLP1-206ENST00000533905 MTFR1LQ9H019 292 aa14.45□□□□□ -0.1
CLP1-206ENST00000533905 EMILIN1Q9Y6C2 1016 aa14.45□□□□□ -0.1
CLP1-206ENST00000533905 NSD3Q9BZ95 1437 aa14.44□□□□□ -0.1
CLP1-206ENST00000533905 AMPHP49418 695 aa14.44□□□□□ -0.1
CLP1-206ENST00000533905 SYTL4Q96C24 671 aaPredicted RBP14.44□□□□□ -0.1
CLP1-206ENST00000533905 COL24A1Q17RW2 1714 aa14.44□□□□□ -0.1
CLP1-206ENST00000533905 RTL1A6NKG5 1358 aa14.43□□□□□ -0.1
CLP1-206ENST00000533905 NLGN2Q8NFZ4 835 aa14.42□□□□□ -0.1
CLP1-206ENST00000533905 QSER1Q2KHR3 1735 aa14.41□□□□□ -0.1
CLP1-206ENST00000533905 ZCRB1Q8TBF4 217 aaKnown RBP14.41□□□□□ -0.1
CLP1-206ENST00000533905 CYP27B1O15528 508 aa14.4□□□□□ -0.1
CLP1-206ENST00000533905 ARXQ96QS3 562 aa14.4□□□□□ -0.1
CLP1-206ENST00000533905 ANKRD26Q9UPS8 1709 aa14.4□□□□□ -0.1
CLP1-206ENST00000533905 NCAPD2Q15021 1401 aa14.4□□□□□ -0.1
CLP1-206ENST00000533905 INSRP06213 1382 aa14.39□□□□□ -0.11
CLP1-206ENST00000533905 TMF1P82094 1093 aa14.39□□□□□ -0.11
CLP1-206ENST00000533905 PKD1L3Q7Z443 1732 aa14.38□□□□□ -0.11
CLP1-206ENST00000533905 MSL1Q68DK7 614 aa14.38□□□□□ -0.11
CLP1-206ENST00000533905 COL23A1Q86Y22 540 aaPredicted RBP14.37□□□□□ -0.11
CLP1-206ENST00000533905 ZNF784Q8NCA9 323 aaPredicted RBP14.37□□□□□ -0.11
CLP1-206ENST00000533905 C5P01031 1676 aa14.36□□□□□ -0.11
CLP1-206ENST00000533905 FLT4P35916 1363 aa14.36□□□□□ -0.11
CLP1-206ENST00000533905 MAP3K5Q99683 1374 aa14.36□□□□□ -0.11
CLP1-206ENST00000533905 KLHL34Q8N239 644 aa14.36□□□□□ -0.11
CLP1-206ENST00000533905 CCNL1Q9UK58 526 aaPredicted RBP14.36□□□□□ -0.11
CLP1-206ENST00000533905 KAT6BQ8WYB5 2073 aa14.35□□□□□ -0.11
CLP1-206ENST00000533905 SLC27A3Q5K4L6 730 aa14.35□□□□□ -0.11
CLP1-206ENST00000533905 TFCP2L1Q9NZI6 479 aa14.35□□□□□ -0.11
CLP1-206ENST00000533905 PALLDQ8WX93 1383 aa14.34□□□□□ -0.11
CLP1-206ENST00000533905 YBX3P16989 372 aaKnown RBP eCLIP14.33□□□□□ -0.12
CLP1-206ENST00000533905 MAP2P11137 1827 aaKnown RBP14.33□□□□□ -0.12
CLP1-206ENST00000533905 ITGB4P16144 1822 aa14.33□□□□□ -0.12
CLP1-206ENST00000533905 TAF1LQ8IZX4 1826 aa14.33□□□□□ -0.12
CLP1-206ENST00000533905 SMG6Q86US8 1419 aaKnown RBP14.32□□□□□ -0.12
CLP1-206ENST00000533905 PPM1GO15355 546 aaPredicted RBP14.32□□□□□ -0.12
CLP1-206ENST00000533905 TATP17735 454 aaPredicted RBP14.32□□□□□ -0.12
CLP1-206ENST00000533905 MPRIPQ6WCQ1 1025 aa14.32□□□□□ -0.12
CLP1-206ENST00000533905 RAPGEF4Q8WZA2 1011 aa14.32□□□□□ -0.12
CLP1-206ENST00000533905 EYA1Q99502 592 aa14.32□□□□□ -0.12
CLP1-206ENST00000533905 C4BP0C0L5 1744 aa14.32□□□□□ -0.12
CLP1-206ENST00000533905 TNNT2P45379 298 aaPredicted RBP14.31□□□□□ -0.12
CLP1-206ENST00000533905 PIGBQ92521 554 aa14.31□□□□□ -0.12
CLP1-206ENST00000533905 POLKQ9UBT6 870 aa14.31□□□□□ -0.12
CLP1-206ENST00000533905 PCDH11XQ9BZA7 1347 aa14.31□□□□□ -0.12
CLP1-206ENST00000533905 PCDH11YQ9BZA8 1340 aa14.31□□□□□ -0.12
CLP1-206ENST00000533905 POLR3GLQ9BT43 218 aa14.3□□□□□ -0.12
CLP1-206ENST00000533905 WWC3Q9ULE0 1092 aa14.3□□□□□ -0.12
CLP1-206ENST00000533905 EIF4A2Q14240 407 aaKnown RBP14.29□□□□□ -0.12
CLP1-206ENST00000533905 PELP1Q8IZL8 1130 aaKnown RBP14.29□□□□□ -0.12
CLP1-206ENST00000533905 LINC00116Q8NCU8 138 aa14.29□□□□□ -0.12
CLP1-206ENST00000533905 MSH5O43196 834 aa14.28□□□□□ -0.12
CLP1-206ENST00000533905 HSPA5P11021 654 aaKnown RBP14.28□□□□□ -0.12
CLP1-206ENST00000533905 ITPK1Q13572 414 aa14.28□□□□□ -0.12
CLP1-206ENST00000533905 UBR3Q6ZT12 1888 aa14.28□□□□□ -0.12
CLP1-206ENST00000533905 SLC4A9Q96Q91 983 aa14.28□□□□□ -0.12
CLP1-206ENST00000533905 KIF24Q5T7B8 1368 aa14.27□□□□□ -0.12
CLP1-206ENST00000533905 WASHC2AQ641Q2 1341 aa14.27□□□□□ -0.12
CLP1-206ENST00000533905 PHF14O94880 888 aa14.27□□□□□ -0.13
CLP1-206ENST00000533905 SLC16A10Q8TF71 515 aa14.27□□□□□ -0.13
CLP1-206ENST00000533905 ASAP1Q9ULH1 1129 aa14.27□□□□□ -0.13
CLP1-206ENST00000533905 CGNL1Q0VF96 1302 aa14.26□□□□□ -0.13
CLP1-206ENST00000533905 GPR162Q16538 588 aa14.26□□□□□ -0.13
CLP1-206ENST00000533905 KDM6AO15550 1401 aaPredicted RBP14.25□□□□□ -0.13
CLP1-206ENST00000533905 PHKG2P15735 406 aa14.25□□□□□ -0.13
CLP1-206ENST00000533905 NKX1-1Q15270 411 aaPredicted RBP14.25□□□□□ -0.13
CLP1-206ENST00000533905 AEBP1Q8IUX7 1158 aa14.25□□□□□ -0.13
CLP1-206ENST00000533905 KDRP35968 1356 aa14.24□□□□□ -0.13
CLP1-206ENST00000533905 POLD1P28340 1107 aa14.24□□□□□ -0.13
CLP1-206ENST00000533905 CHD4Q14839 1912 aa14.23□□□□□ -0.13
CLP1-206ENST00000533905 DCAF8L1A6NGE4 600 aa14.23□□□□□ -0.13
CLP1-206ENST00000533905 ATG3Q9NT62 314 aa14.23□□□□□ -0.13
CLP1-206ENST00000533905 KIAA1551Q9HCM1 1747 aa14.23□□□□□ -0.13
CLP1-206ENST00000533905 IGSF1Q8N6C5 1336 aa14.22□□□□□ -0.13
CLP1-206ENST00000533905 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.22□□□□□ -0.13
CLP1-206ENST00000533905 PANK3Q9H999 370 aa14.22□□□□□ -0.13
CLP1-206ENST00000533905 LOC102724428A0A0B4J2F2 783 aa14.21□□□□□ -0.13
CLP1-206ENST00000533905 SLC24A1O60721 1099 aa14.21□□□□□ -0.13
CLP1-206ENST00000533905 SIK1P57059 783 aa14.21□□□□□ -0.13
CLP1-206ENST00000533905 CDCA8Q53HL2 280 aa14.21□□□□□ -0.13
CLP1-206ENST00000533905 AK7Q96M32 723 aa14.19□□□□□ -0.14
CLP1-206ENST00000533905 COL5A3P25940 1745 aaPredicted RBP14.18□□□□□ -0.14
CLP1-206ENST00000533905 C1QTNF8P60827 252 aa14.18□□□□□ -0.14
CLP1-206ENST00000533905 TMOD3Q9NYL9 352 aa14.18□□□□□ -0.14
CLP1-206ENST00000533905 SPG7Q9UQ90 795 aa14.18□□□□□ -0.14
CLP1-206ENST00000533905 ADCY9O60503 1353 aa14.18□□□□□ -0.14
CLP1-206ENST00000533905 ATP10DQ9P241 1426 aa14.17□□□□□ -0.14
CLP1-206ENST00000533905 GNPATO15228 680 aa14.17□□□□□ -0.14
CLP1-206ENST00000533905 CICQ96RK0 1608 aaPredicted RBP14.16□□□□□ -0.14
CLP1-206ENST00000533905 C4AP0C0L4 1744 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms