RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 FIGNL2A6NMB9 653 aa7.37□□□□□ -1.23
BRCA2-205ENST00000533776 TTLL8A6PVC2 850 aa7.37□□□□□ -1.23
BRCA2-205ENST00000533776 FURINP09958 794 aa7.37□□□□□ -1.23
BRCA2-205ENST00000533776 NBPF20Q3BBV1 942 aa7.37□□□□□ -1.23
BRCA2-205ENST00000533776 Q6ZVU0 165 aa7.37□□□□□ -1.23
BRCA2-205ENST00000533776 DZIP3Q86Y13 1208 aaKnown RBP7.37□□□□□ -1.23
BRCA2-205ENST00000533776 AGBL1Q96MI9 1066 aa7.37□□□□□ -1.23
BRCA2-205ENST00000533776 TMPRSS4Q9NRS4 437 aa7.37□□□□□ -1.23
BRCA2-205ENST00000533776 ADAMTS2O95450 1211 aa7.36□□□□□ -1.23
BRCA2-205ENST00000533776 CELA2BP08218 269 aaPredicted RBP7.36□□□□□ -1.23
BRCA2-205ENST00000533776 MAP3K10Q02779 954 aa7.36□□□□□ -1.23
BRCA2-205ENST00000533776 TRIM34Q9BYJ4 488 aa7.36□□□□□ -1.23
BRCA2-205ENST00000533776 BRPF1P55201 1214 aaPredicted RBP7.35□□□□□ -1.23
BRCA2-205ENST00000533776 RELBQ01201 579 aa7.35□□□□□ -1.23
BRCA2-205ENST00000533776 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.35□□□□□ -1.23
BRCA2-205ENST00000533776 TMEM259Q4ZIN3 620 aa7.35□□□□□ -1.23
BRCA2-205ENST00000533776 BEND7Q8N7W2 519 aaPredicted RBP7.35□□□□□ -1.23
BRCA2-205ENST00000533776 SPINT1O43278 529 aa7.34□□□□□ -1.23
BRCA2-205ENST00000533776 CCDC155Q8N6L0 562 aa7.34□□□□□ -1.23
BRCA2-205ENST00000533776 ERVH48-1M5A8F1 160 aa7.33□□□□□ -1.24
BRCA2-205ENST00000533776 VWA5B2Q8N398 1253 aa7.33□□□□□ -1.24
BRCA2-205ENST00000533776 ZNF784Q8NCA9 323 aaPredicted RBP7.33□□□□□ -1.24
BRCA2-205ENST00000533776 ENAMQ9NRM1 1142 aa7.33□□□□□ -1.24
BRCA2-205ENST00000533776 CTSOP43234 321 aaPredicted RBP7.32□□□□□ -1.24
BRCA2-205ENST00000533776 SRSF11Q05519 484 aaKnown RBP7.32□□□□□ -1.24
BRCA2-205ENST00000533776 GJD4Q96KN9 370 aaPredicted RBP7.32□□□□□ -1.24
BRCA2-205ENST00000533776 INSM2Q96T92 566 aaPredicted RBP7.32□□□□□ -1.24
BRCA2-205ENST00000533776 ZNF395Q9H8N7 513 aaPredicted RBP7.32□□□□□ -1.24
BRCA2-205ENST00000533776 POLMQ9NP87 494 aaPredicted RBP7.32□□□□□ -1.24
BRCA2-205ENST00000533776 PCDHB9Q9Y5E1 797 aa7.32□□□□□ -1.24
BRCA2-205ENST00000533776 ZBBXA8MT70 800 aa7.31□□□□□ -1.24
BRCA2-205ENST00000533776 ESPNB1AK53 854 aa7.31□□□□□ -1.24
BRCA2-205ENST00000533776 SV2AQ7L0J3 742 aa7.31□□□□□ -1.24
BRCA2-205ENST00000533776 SLC35F4A4IF30 521 aa7.3□□□□□ -1.24
BRCA2-205ENST00000533776 ADH1AP07327 375 aa7.3□□□□□ -1.24
BRCA2-205ENST00000533776 ITGB7P26010 798 aa7.3□□□□□ -1.24
BRCA2-205ENST00000533776 CYLDQ9NQC7 956 aa7.3□□□□□ -1.24
BRCA2-205ENST00000533776 LILRA1O75019 489 aa7.29□□□□□ -1.24
BRCA2-205ENST00000533776 FBXO45P0C2W1 286 aa7.29□□□□□ -1.24
BRCA2-205ENST00000533776 ITGA6P23229 1130 aa7.29□□□□□ -1.24
BRCA2-205ENST00000533776 ADD1P35611 737 aaKnown RBP7.29□□□□□ -1.24
BRCA2-205ENST00000533776 TPRNQ4KMQ1 711 aa7.29□□□□□ -1.24
BRCA2-205ENST00000533776 KRBA1A5PL33 1030 aa7.28□□□□□ -1.24
BRCA2-205ENST00000533776 RNF217Q8TC41 542 aa7.28□□□□□ -1.24
BRCA2-205ENST00000533776 GIGYF1O75420 1035 aaPredicted RBP7.27□□□□□ -1.25
BRCA2-205ENST00000533776 PTGIRP43119 386 aa7.27□□□□□ -1.25
BRCA2-205ENST00000533776 LCE1DQ5T752 114 aa7.27□□□□□ -1.25
BRCA2-205ENST00000533776 FOXD4L5Q5VV16 416 aaPredicted RBP7.27□□□□□ -1.25
BRCA2-205ENST00000533776 SEPT12Q8IYM1 358 aa7.27□□□□□ -1.25
BRCA2-205ENST00000533776 GOLGA2P5Q9HBQ8 144 aa7.27□□□□□ -1.25
BRCA2-205ENST00000533776 CDC14CA4D256 554 aa7.26□□□□□ -1.25
BRCA2-205ENST00000533776 PODNQ7Z5L7 613 aa7.26□□□□□ -1.25
BRCA2-205ENST00000533776 KDF1Q8NAX2 398 aaPredicted RBP7.26□□□□□ -1.25
BRCA2-205ENST00000533776 NR1H3Q13133 447 aa7.25□□□□□ -1.25
BRCA2-205ENST00000533776 MTMR14Q8NCE2 650 aa7.25□□□□□ -1.25
BRCA2-205ENST00000533776 BANK1Q8NDB2 785 aa7.24□□□□□ -1.25
BRCA2-205ENST00000533776 SNRKQ9NRH2 765 aa7.24□□□□□ -1.25
BRCA2-205ENST00000533776 NDUFB9Q9Y6M9 179 aa7.24□□□□□ -1.25
BRCA2-205ENST00000533776 GPR37L1O60883 481 aa7.23□□□□□ -1.25
BRCA2-205ENST00000533776 GAS6Q14393 721 aa7.23□□□□□ -1.25
BRCA2-205ENST00000533776 SENP3-EIF4A1A0A087X0R7 540 aa7.22□□□□□ -1.25
BRCA2-205ENST00000533776 ATP5J2-PTCD1G3V325 749 aa7.22□□□□□ -1.25
BRCA2-205ENST00000533776 LYSMD3Q7Z3D4 306 aa7.22□□□□□ -1.25
BRCA2-205ENST00000533776 TRIM52Q96A61 297 aa7.22□□□□□ -1.25
BRCA2-205ENST00000533776 ZNF330Q9Y3S2 320 aaPredicted RBP7.22□□□□□ -1.25
BRCA2-205ENST00000533776 MEN1O00255 615 aa7.21□□□□□ -1.26
BRCA2-205ENST00000533776 RHOQP17081 205 aa7.21□□□□□ -1.26
BRCA2-205ENST00000533776 ZMYM1Q5SVZ6 1142 aa7.21□□□□□ -1.26
BRCA2-205ENST00000533776 CC2D2BQ6DHV5 1058 aa7.21□□□□□ -1.26
BRCA2-205ENST00000533776 PRICKLE2Q7Z3G6 844 aa7.21□□□□□ -1.26
BRCA2-205ENST00000533776 PCDHB11Q9Y5F2 797 aa7.21□□□□□ -1.26
BRCA2-205ENST00000533776 APBB1O00213 710 aa7.2□□□□□ -1.26
BRCA2-205ENST00000533776 ERVK-9P63128 1117 aa7.2□□□□□ -1.26
BRCA2-205ENST00000533776 RNF20Q5VTR2 975 aa7.2□□□□□ -1.26
BRCA2-205ENST00000533776 SOCS7O14512 581 aa7.19□□□□□ -1.26
BRCA2-205ENST00000533776 SCTRP47872 440 aa7.19□□□□□ -1.26
BRCA2-205ENST00000533776 RNF144AP50876 292 aaPredicted RBP7.19□□□□□ -1.26
BRCA2-205ENST00000533776 MCCD1P59942 119 aaPredicted RBP7.19□□□□□ -1.26
BRCA2-205ENST00000533776 NEDD1Q8NHV4 660 aa7.19□□□□□ -1.26
BRCA2-205ENST00000533776 A0A1W2PRU2 124 aa7.18□□□□□ -1.26
BRCA2-205ENST00000533776 BCRP11274 1271 aa7.18□□□□□ -1.26
BRCA2-205ENST00000533776 CCDC125Q86Z20 511 aa7.18□□□□□ -1.26
BRCA2-205ENST00000533776 ZNF592Q92610 1267 aa7.18□□□□□ -1.26
BRCA2-205ENST00000533776 CYP2U1Q7Z449 544 aa7.17□□□□□ -1.26
BRCA2-205ENST00000533776 ALYREFQ86V81 257 aaKnown RBP7.17□□□□□ -1.26
BRCA2-205ENST00000533776 NLRP3Q96P20 1036 aa7.17□□□□□ -1.26
BRCA2-205ENST00000533776 CUEDC1Q9NWM3 386 aaPredicted RBP7.17□□□□□ -1.26
BRCA2-205ENST00000533776 TBC1D2BQ9UPU7 963 aa7.17□□□□□ -1.26
BRCA2-205ENST00000533776 GPC1P35052 558 aa7.16□□□□□ -1.26
BRCA2-205ENST00000533776 SLC27A3Q5K4L6 730 aa7.16□□□□□ -1.26
BRCA2-205ENST00000533776 OSBPL3Q9H4L5 887 aa7.16□□□□□ -1.26
BRCA2-205ENST00000533776 ESF1Q9H501 851 aaKnown RBP7.16□□□□□ -1.26
BRCA2-205ENST00000533776 ARHGEF10LQ9HCE6 1279 aa7.16□□□□□ -1.26
BRCA2-205ENST00000533776 RAB6BQ9NRW1 208 aa7.15□□□□□ -1.26
BRCA2-205ENST00000533776 TRAK2O60296 914 aa7.14□□□□□ -1.27
BRCA2-205ENST00000533776 COL8A1P27658 744 aa7.14□□□□□ -1.27
BRCA2-205ENST00000533776 POU4F2Q12837 409 aa7.14□□□□□ -1.27
BRCA2-205ENST00000533776 RIPOR1Q6ZS17 1223 aa7.14□□□□□ -1.27
BRCA2-205ENST00000533776 CCDC85AQ96PX6 553 aaPredicted RBP7.14□□□□□ -1.27
BRCA2-205ENST00000533776 LRRC4BQ9NT99 713 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms