RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 EID1Q9Y6B2 187 aa11.17□□□□□ -0.62
CASP4-212ENST00000533730 POLR1AO95602 1720 aaPredicted RBP11.17□□□□□ -0.62
CASP4-212ENST00000533730 TMEM2Q9UHN6 1383 aa11.16□□□□□ -0.62
CASP4-212ENST00000533730 BCAMP50895 628 aa11.16□□□□□ -0.62
CASP4-212ENST00000533730 SKIV2LQ15477 1246 aaKnown RBP11.16□□□□□ -0.62
CASP4-212ENST00000533730 THSD4Q6ZMP0 1018 aa11.16□□□□□ -0.62
CASP4-212ENST00000533730 FNBP4Q8N3X1 1017 aaPredicted RBP11.16□□□□□ -0.62
CASP4-212ENST00000533730 KCTD12Q96CX2 325 aaKnown RBP11.16□□□□□ -0.62
CASP4-212ENST00000533730 LRCH3Q96II8 777 aa11.16□□□□□ -0.62
CASP4-212ENST00000533730 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.16□□□□□ -0.62
CASP4-212ENST00000533730 SCAF11Q99590 1463 aaKnown RBP11.16□□□□□ -0.62
CASP4-212ENST00000533730 TMEM131LA2VDJ0 1609 aa11.16□□□□□ -0.62
CASP4-212ENST00000533730 MED14O60244 1454 aa11.15□□□□□ -0.62
CASP4-212ENST00000533730 CLTCL1P53675 1640 aa11.14□□□□□ -0.63
CASP4-212ENST00000533730 TXNDC2Q86VQ3 553 aa11.14□□□□□ -0.63
CASP4-212ENST00000533730 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.14□□□□□ -0.63
CASP4-212ENST00000533730 CCDC97Q96F63 343 aaPredicted RBP11.14□□□□□ -0.63
CASP4-212ENST00000533730 FAM217BQ9NTX9 383 aaPredicted RBP11.14□□□□□ -0.63
CASP4-212ENST00000533730 CCDC144AA2RUR9 1427 aa11.14□□□□□ -0.63
CASP4-212ENST00000533730 NPHP4O75161 1426 aaPredicted RBP11.14□□□□□ -0.63
CASP4-212ENST00000533730 NEURL4Q96JN8 1562 aa11.13□□□□□ -0.63
CASP4-212ENST00000533730 SLF2Q8IX21 1173 aa11.13□□□□□ -0.63
CASP4-212ENST00000533730 PROCA1Q8NCQ7 364 aaPredicted RBP11.13□□□□□ -0.63
CASP4-212ENST00000533730 RNF166Q96A37 237 aaPredicted RBP11.13□□□□□ -0.63
CASP4-212ENST00000533730 RIMS2Q9UQ26 1411 aa11.12□□□□□ -0.63
CASP4-212ENST00000533730 RAD21O60216 631 aa11.12□□□□□ -0.63
CASP4-212ENST00000533730 SLC10A3P09131 477 aa11.12□□□□□ -0.63
CASP4-212ENST00000533730 SSTR3P32745 418 aaPredicted RBP11.12□□□□□ -0.63
CASP4-212ENST00000533730 SERPINA10Q9UK55 444 aa11.12□□□□□ -0.63
CASP4-212ENST00000533730 KIF1BO60333 1816 aa11.12□□□□□ -0.63
CASP4-212ENST00000533730 ZFYVE9O95405 1425 aa11.11□□□□□ -0.63
CASP4-212ENST00000533730 TRAIPQ9BWF2 469 aa11.11□□□□□ -0.63
CASP4-212ENST00000533730 IQGAP1P46940 1657 aa11.11□□□□□ -0.63
CASP4-212ENST00000533730 MYO5BQ9ULV0 1848 aa11.1□□□□□ -0.63
CASP4-212ENST00000533730 PPP1R15AO75807 674 aaPredicted RBP11.1□□□□□ -0.63
CASP4-212ENST00000533730 LTKP29376 864 aa11.1□□□□□ -0.63
CASP4-212ENST00000533730 ZNF326Q5BKZ1 582 aaKnown RBP11.1□□□□□ -0.63
CASP4-212ENST00000533730 BEGAINQ9BUH8 593 aa11.1□□□□□ -0.63
CASP4-212ENST00000533730 POLR3EQ9NVU0 708 aa11.1□□□□□ -0.63
CASP4-212ENST00000533730 TSR3Q9UJK0 312 aaKnown RBP11.1□□□□□ -0.63
CASP4-212ENST00000533730 RPGRIP1LQ68CZ1 1315 aa11.09□□□□□ -0.63
CASP4-212ENST00000533730 ANKRD30BQ9BXX2 1392 aa11.09□□□□□ -0.63
CASP4-212ENST00000533730 PLEKHG1Q9ULL1 1385 aa11.09□□□□□ -0.63
CASP4-212ENST00000533730 DDX11L8A8MPP1 907 aa11.09□□□□□ -0.63
CASP4-212ENST00000533730 CD46P15529 392 aa11.09□□□□□ -0.63
CASP4-212ENST00000533730 SULF1Q8IWU6 871 aa11.09□□□□□ -0.63
CASP4-212ENST00000533730 HPS5Q9UPZ3 1129 aa11.09□□□□□ -0.63
CASP4-212ENST00000533730 KCTD17Q8N5Z5 321 aa11.08□□□□□ -0.64
CASP4-212ENST00000533730 WBP1LQ9NX94 342 aa11.08□□□□□ -0.64
CASP4-212ENST00000533730 RNF40O75150 1001 aa11.06□□□□□ -0.64
CASP4-212ENST00000533730 PPP4CP60510 307 aa11.06□□□□□ -0.64
CASP4-212ENST00000533730 COG6Q9Y2V7 657 aa11.06□□□□□ -0.64
CASP4-212ENST00000533730 SPATA31E1Q6ZUB1 1445 aa11.06□□□□□ -0.64
CASP4-212ENST00000533730 NEXMIFQ5QGS0 1516 aa11.05□□□□□ -0.64
CASP4-212ENST00000533730 SPDYE5A6NIY4 337 aa11.05□□□□□ -0.64
CASP4-212ENST00000533730 SLC4A3P48751 1232 aa11.05□□□□□ -0.64
CASP4-212ENST00000533730 PTPN5P54829 565 aa11.05□□□□□ -0.64
CASP4-212ENST00000533730 DIP2AQ14689 1571 aa11.05□□□□□ -0.64
CASP4-212ENST00000533730 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.05□□□□□ -0.64
CASP4-212ENST00000533730 AEBP1Q8IUX7 1158 aa11.04□□□□□ -0.64
CASP4-212ENST00000533730 PLSCR2Q9NRY7 297 aa11.04□□□□□ -0.64
CASP4-212ENST00000533730 TBX22Q9Y458 520 aa11.04□□□□□ -0.64
CASP4-212ENST00000533730 ZNF335Q9H4Z2 1342 aaPredicted RBP11.04□□□□□ -0.64
CASP4-212ENST00000533730 CPS1P31327 1500 aa11.04□□□□□ -0.64
CASP4-212ENST00000533730 LTBP4Q8N2S1 1624 aa11.03□□□□□ -0.64
CASP4-212ENST00000533730 GCGRP47871 477 aa11.03□□□□□ -0.64
CASP4-212ENST00000533730 RGL3Q3MIN7 710 aa11.03□□□□□ -0.64
CASP4-212ENST00000533730 MYSM1Q5VVJ2 828 aa11.03□□□□□ -0.64
CASP4-212ENST00000533730 RDH13Q8NBN7 331 aa11.03□□□□□ -0.64
CASP4-212ENST00000533730 SETBP1Q9Y6X0 1596 aa11.03□□□□□ -0.64
CASP4-212ENST00000533730 DHX57Q6P158 1386 aaKnown RBP11.03□□□□□ -0.64
CASP4-212ENST00000533730 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
CASP4-212ENST00000533730 IQSEC2Q5JU85 1478 aa11.02□□□□□ -0.65
CASP4-212ENST00000533730 APLP1P51693 650 aa11.02□□□□□ -0.65
CASP4-212ENST00000533730 NUTM2DQ5VT03 806 aaPredicted RBP11.02□□□□□ -0.65
CASP4-212ENST00000533730 SLC26A8Q96RN1 970 aa11.02□□□□□ -0.65
CASP4-212ENST00000533730 PCGF6Q9BYE7 350 aa11.02□□□□□ -0.65
CASP4-212ENST00000533730 SNRKQ9NRH2 765 aa11.02□□□□□ -0.65
CASP4-212ENST00000533730 HCSTQ9UBK5 93 aa11.02□□□□□ -0.65
CASP4-212ENST00000533730 PPLO60437 1756 aa11.02□□□□□ -0.65
CASP4-212ENST00000533730 CFHP08603 1231 aa11.01□□□□□ -0.65
CASP4-212ENST00000533730 NYAP1Q6ZVC0 841 aa11.01□□□□□ -0.65
CASP4-212ENST00000533730 RETREG2Q8NC44 543 aa11.01□□□□□ -0.65
CASP4-212ENST00000533730 ADAMTS13Q76LX8 1427 aa11.01□□□□□ -0.65
CASP4-212ENST00000533730 KCNA6P17658 529 aa11□□□□□ -0.65
CASP4-212ENST00000533730 CLK2P49760 499 aaKnown RBP11□□□□□ -0.65
CASP4-212ENST00000533730 ZNF330Q9Y3S2 320 aaPredicted RBP11□□□□□ -0.65
CASP4-212ENST00000533730 NKTRP30414 1462 aaKnown RBP11□□□□□ -0.65
CASP4-212ENST00000533730 MYOM2P54296 1465 aa11□□□□□ -0.65
CASP4-212ENST00000533730 IFT172Q9UG01 1749 aa10.99□□□□□ -0.65
CASP4-212ENST00000533730 RFC5P40937 340 aa10.99□□□□□ -0.65
CASP4-212ENST00000533730 NWD1Q149M9 1564 aa10.99□□□□□ -0.65
CASP4-212ENST00000533730 ACTN4O43707 911 aaKnown RBP10.98□□□□□ -0.65
CASP4-212ENST00000533730 BANK1Q8NDB2 785 aa10.98□□□□□ -0.65
CASP4-212ENST00000533730 NRXN3Q9Y4C0 1643 aa10.98□□□□□ -0.65
CASP4-212ENST00000533730 KMT5BQ4FZB7 885 aa10.97□□□□□ -0.65
CASP4-212ENST00000533730 NRXN1Q9ULB1 1477 aa10.96□□□□□ -0.65
CASP4-212ENST00000533730 PIK3C2GO75747 1445 aa10.96□□□□□ -0.65
CASP4-212ENST00000533730 ADGRF5Q8IZF2 1346 aa10.96□□□□□ -0.65
CASP4-212ENST00000533730 PRR14Q9BWN1 585 aa10.96□□□□□ -0.65
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