RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 MNS1Q8NEH6 495 aa7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 RPGRQ92834 1020 aaKnown RBP7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 PDCL3Q9H2J4 239 aa7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 MBD3O95983 291 aa7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 CDR1P51861 262 aa7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 LARP1Q6PKG0 1096 aaKnown RBP7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 NME9Q86XW9 330 aa7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 CDK13Q14004 1512 aaKnown RBP7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 FIBPO43427 364 aa7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 BRPF1P55201 1214 aaPredicted RBP7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 RPAP2Q8IXW5 612 aaPredicted RBP7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 AIDAQ96BJ3 306 aa7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 RUFY1Q96T51 708 aa7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 TOP2BQ02880 1626 aa7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 LETM1O95202 739 aaPredicted RBP7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 CHMP4BP1P59074 171 aa7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 DUSP27Q5VZP5 1158 aa7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 BLOC1S2Q6QNY1 142 aa7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 NOL7Q9UMY1 257 aaKnown RBP7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 CDKL5O76039 1030 aa7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 SSBP05455 408 aaKnown RBP eCLIP7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 IFIT1P09914 478 aaKnown RBP7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 THUMPD2Q9BTF0 503 aaKnown RBP7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 TRMT112Q9UI30 125 aaKnown RBP7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 TTLL5Q6EMB2 1281 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 AK7Q96M32 723 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 MYD88Q99836 296 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 POLR3DP05423 398 aaPredicted RBP7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 IDI1Q13907 227 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 DCTN1Q14203 1278 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 TAF7Q15545 349 aaPredicted RBP7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 WDR78Q5VTH9 848 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 AEBP1Q8IUX7 1158 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 AKAP2Q9Y2D5 859 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 LRPPRCP42704 1394 aaKnown RBP7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 PATL2C9JE40 543 aaKnown RBP7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 TRIM5Q9C035 493 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 TOM1O60784 492 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 SMC2O95347 1197 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 CADPS2Q86UW7 1296 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 RNF214Q8ND24 703 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 SMARCE1Q969G3 411 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 FANCIQ9NVI1 1328 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 WASLO00401 505 aaPredicted RBP7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 HSP90AB3PQ58FF7 597 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 CHD1LQ86WJ1 897 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 ZNF287Q9HBT7 754 aa7.56□□□□□ -1.2
UBQLN1-206ENST00000533705 C6orf229H3BNL8 230 aa7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 STIM1Q13586 685 aa7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 KRT32Q14532 448 aa7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 CAGE1Q8TC20 777 aa7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 MYCNP04198 464 aaPredicted RBP7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 CWC27Q6UX04 472 aaKnown RBP7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 SUPT6HQ7KZ85 1726 aaKnown RBP7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 ME1P48163 572 aa7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 SETQ01105 290 aaPredicted RBP7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 DZIP1Q86YF9 867 aaKnown RBP7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 BMP2KQ9NSY1 1161 aaPredicted RBP7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 PRPF40AO75400 957 aaKnown RBP7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 GPTP24298 496 aa7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 IFIT5Q13325 482 aaKnown RBP7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 CHRNA2Q15822 529 aa7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 MKNK2Q9HBH9 465 aa7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 FAM13BQ9NYF5 915 aa7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 TIAM1Q13009 1591 aa7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 MINDY4BA8MYZ0 360 aa7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 MATR3P43243 847 aaKnown RBP eCLIP7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 ARGLU1Q9NWB6 273 aaPredicted RBP7.55□□□□□ -1.2
UBQLN1-206ENST00000533705 IQGAP2Q13576 1575 aa7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 AKNAQ7Z591 1439 aa7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 IMMTQ16891 758 aaKnown RBP7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 LARP1BQ659C4 914 aaKnown RBP7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 CAVIN1Q6NZI2 390 aaKnown RBP7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 ACBD3Q9H3P7 528 aa7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 NUTM1Q86Y26 1132 aa7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 ZNF622Q969S3 477 aaKnown RBP eCLIP7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 KIF1BPQ96EK5 621 aa7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 JAKMIP1Q96N16 626 aaKnown RBP7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 PDRG1Q9NUG6 133 aa7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 TANGO6Q9C0B7 1094 aa7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 ZNHIT6Q9NWK9 470 aaKnown RBP7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 EXOC6BQ9Y2D4 811 aa7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 EMILIN1Q9Y6C2 1016 aa7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 PLB1Q6P1J6 1458 aa7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 WDR33Q9C0J8 1336 aaKnown RBP7.54□□□□□ -1.2
UBQLN1-206ENST00000533705 ABCA10Q8WWZ4 1543 aa7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 KRT85P78386 507 aa7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 ZBTB3Q9H5J0 574 aa7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 DACH1Q9UI36 760 aa7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 DENND4BO75064 1496 aaPredicted RBP7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 RFC4P35249 363 aa7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 NASPP49321 788 aaPredicted RBP7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 WASF1Q92558 559 aa7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 MYO6Q9UM54 1294 aa7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 PEG3Q9GZU2 1588 aa7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 ZSCAN31Q96LW9 406 aaPredicted RBP7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 TEX35Q5T0J7 233 aa7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 TMEM57Q8N5G2 664 aa7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 SCLT1Q96NL6 688 aa7.53□□□□□ -1.2
UBQLN1-206ENST00000533705 GLRX3O76003 335 aaKnown RBP7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms