RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 U2SURPO15042 1029 aaKnown RBP29.13■■■□□ 2.25
VPS51-212ENST00000533656 USHBP1Q8N6Y0 703 aa29.13■■■□□ 2.25
VPS51-212ENST00000533656 RAPGEF4Q8WZA2 1011 aa29.13■■■□□ 2.25
VPS51-212ENST00000533656 RGPD2P0DJD1 1756 aa29.11■■■□□ 2.25
VPS51-212ENST00000533656 TRIM37O94972 964 aa29.11■■■□□ 2.25
VPS51-212ENST00000533656 LRP5O75197 1615 aa29.1■■■□□ 2.25
VPS51-212ENST00000533656 RREB1Q92766 1687 aa29.1■■■□□ 2.25
VPS51-212ENST00000533656 PSDA5PKW4 1024 aaPredicted RBP29.1■■■□□ 2.25
VPS51-212ENST00000533656 SULT6B1Q6IMI4 303 aa29.1■■■□□ 2.25
VPS51-212ENST00000533656 TATP17735 454 aaPredicted RBP29.09■■■□□ 2.25
VPS51-212ENST00000533656 U2AF1L5P0DN76 240 aaPredicted RBP29.08■■■□□ 2.25
VPS51-212ENST00000533656 U2AF1Q01081 240 aaKnown RBP eCLIP29.08■■■□□ 2.25
VPS51-212ENST00000533656 FAM196AQ6ZSG2 479 aa29.08■■■□□ 2.25
VPS51-212ENST00000533656 OVOS2A0A0G2JMS6 1433 aa29.08■■■□□ 2.25
VPS51-212ENST00000533656 SBF2Q86WG5 1849 aa29.08■■■□□ 2.25
VPS51-212ENST00000533656 CCER2I3L3R5 266 aa29.07■■■□□ 2.24
VPS51-212ENST00000533656 MEGF6O75095 1541 aa29.07■■■□□ 2.24
VPS51-212ENST00000533656 MRS2Q9HD23 443 aa29.07■■■□□ 2.24
VPS51-212ENST00000533656 NUP188Q5SRE5 1749 aa29.06■■■□□ 2.24
VPS51-212ENST00000533656 PDE3BQ13370 1112 aa29.06■■■□□ 2.24
VPS51-212ENST00000533656 WDR43Q15061 677 aaKnown RBP eCLIP29.06■■■□□ 2.24
VPS51-212ENST00000533656 EZH2Q15910 746 aaKnown RBP29.06■■■□□ 2.24
VPS51-212ENST00000533656 TNS2Q63HR2 1409 aa29.05■■■□□ 2.24
VPS51-212ENST00000533656 AEBP1Q8IUX7 1158 aa29.05■■■□□ 2.24
VPS51-212ENST00000533656 FCHSD2O94868 740 aa29.04■■■□□ 2.24
VPS51-212ENST00000533656 DDB1Q16531 1140 aa29.04■■■□□ 2.24
VPS51-212ENST00000533656 PNNQ9H307 717 aaKnown RBP29.04■■■□□ 2.24
VPS51-212ENST00000533656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.04■■■□□ 2.24
VPS51-212ENST00000533656 HMOX1P09601 288 aa29.03■■■□□ 2.24
VPS51-212ENST00000533656 EXOC5O00471 708 aa29.02■■■□□ 2.24
VPS51-212ENST00000533656 CAMKK2Q96RR4 588 aa29.02■■■□□ 2.24
VPS51-212ENST00000533656 RSPH6AQ9H0K4 717 aa29.01■■■□□ 2.23
VPS51-212ENST00000533656 AMOTQ4VCS5 1084 aa29■■■□□ 2.23
VPS51-212ENST00000533656 CCDC184Q52MB2 194 aa29■■■□□ 2.23
VPS51-212ENST00000533656 ZCRB1Q8TBF4 217 aaKnown RBP29■■■□□ 2.23
VPS51-212ENST00000533656 SPG7Q9UQ90 795 aa29■■■□□ 2.23
VPS51-212ENST00000533656 APBA3O96018 575 aa28.99■■■□□ 2.23
VPS51-212ENST00000533656 PLEKHO1Q53GL0 409 aaPredicted RBP28.98■■■□□ 2.23
VPS51-212ENST00000533656 MIER1Q8N108 512 aa28.97■■■□□ 2.23
VPS51-212ENST00000533656 PKD1L3Q7Z443 1732 aa28.97■■■□□ 2.23
VPS51-212ENST00000533656 PCDH11XQ9BZA7 1347 aa28.96■■■□□ 2.23
VPS51-212ENST00000533656 PCDH11YQ9BZA8 1340 aa28.96■■■□□ 2.23
VPS51-212ENST00000533656 NEFMP07197 916 aa28.96■■■□□ 2.23
VPS51-212ENST00000533656 PRKAR2BP31323 418 aa28.96■■■□□ 2.23
VPS51-212ENST00000533656 R3HDM1Q15032 1099 aaKnown RBP28.96■■■□□ 2.23
VPS51-212ENST00000533656 PNISRQ8TF01 805 aaKnown RBP28.96■■■□□ 2.23
VPS51-212ENST00000533656 ADAMTS8Q9UP79 889 aa28.93■■■□□ 2.22
VPS51-212ENST00000533656 RGPD3A6NKT7 1758 aaPredicted RBP28.93■■■□□ 2.22
VPS51-212ENST00000533656 RGPD4Q7Z3J3 1758 aa28.93■■■□□ 2.22
VPS51-212ENST00000533656 GAS2L2Q8NHY3 880 aa28.91■■■□□ 2.22
VPS51-212ENST00000533656 PLEKHF1Q96S99 279 aa28.9■■■□□ 2.22
VPS51-212ENST00000533656 MAPK8IP3Q9UPT6 1336 aa28.9■■■□□ 2.22
VPS51-212ENST00000533656 BCL9O00512 1426 aa28.89■■■□□ 2.22
VPS51-212ENST00000533656 PTF1AQ7RTS3 328 aa28.88■■■□□ 2.21
VPS51-212ENST00000533656 IFNL2Q8IZJ0 200 aa28.88■■■□□ 2.21
VPS51-212ENST00000533656 ZNF530Q6P9A1 599 aaPredicted RBP28.87■■■□□ 2.21
VPS51-212ENST00000533656 MARCH10Q8NA82 808 aaPredicted RBP28.87■■■□□ 2.21
VPS51-212ENST00000533656 DDX54Q8TDD1 881 aaKnown RBP28.87■■■□□ 2.21
VPS51-212ENST00000533656 SHANK3Q9BYB0 1731 aa28.86■■■□□ 2.21
VPS51-212ENST00000533656 CYP27B1O15528 508 aa28.86■■■□□ 2.21
VPS51-212ENST00000533656 HSP90AB1P08238 724 aaKnown RBP28.86■■■□□ 2.21
VPS51-212ENST00000533656 C1orf141Q5JVX7 400 aa28.86■■■□□ 2.21
VPS51-212ENST00000533656 RUNDC1Q96C34 613 aa28.86■■■□□ 2.21
VPS51-212ENST00000533656 PHKG2P15735 406 aa28.85■■■□□ 2.21
VPS51-212ENST00000533656 MTHFSDQ2M296 383 aaKnown RBP28.85■■■□□ 2.21
VPS51-212ENST00000533656 NKX1-1Q15270 411 aaPredicted RBP28.84■■■□□ 2.21
VPS51-212ENST00000533656 AKAP4Q5JQC9 854 aa28.84■■■□□ 2.21
VPS51-212ENST00000533656 PHACTR3Q96KR7 559 aa28.84■■■□□ 2.21
VPS51-212ENST00000533656 FAM9BQ8IZU0 186 aa28.8■■■□□ 2.2
VPS51-212ENST00000533656 NFE2L2Q16236 605 aa28.79■■■□□ 2.2
VPS51-212ENST00000533656 CCDC146Q8IYE0 955 aa28.79■■■□□ 2.2
VPS51-212ENST00000533656 DCAF5Q96JK2 942 aa28.79■■■□□ 2.2
VPS51-212ENST00000533656 NHSQ6T4R5 1651 aa28.79■■■□□ 2.2
VPS51-212ENST00000533656 MAP3K5Q99683 1374 aa28.78■■■□□ 2.2
VPS51-212ENST00000533656 GNAT3A8MTJ3 354 aa28.77■■■□□ 2.2
VPS51-212ENST00000533656 HTATSF1O43719 755 aaKnown RBP28.76■■■□□ 2.19
VPS51-212ENST00000533656 BCL11BQ9C0K0 894 aaPredicted RBP28.75■■■□□ 2.19
VPS51-212ENST00000533656 TMPOP42166 694 aaKnown RBP28.73■■■□□ 2.19
VPS51-212ENST00000533656 LMOD3Q0VAK6 560 aa28.73■■■□□ 2.19
VPS51-212ENST00000533656 CASZ1Q86V15 1759 aa28.73■■■□□ 2.19
VPS51-212ENST00000533656 PLSCR1O15162 318 aa28.72■■■□□ 2.19
VPS51-212ENST00000533656 RTF1Q92541 710 aaKnown RBP28.72■■■□□ 2.19
VPS51-212ENST00000533656 ANO8Q9HCE9 1232 aaPredicted RBP28.72■■■□□ 2.19
VPS51-212ENST00000533656 KDM6AO15550 1401 aaPredicted RBP28.71■■■□□ 2.19
VPS51-212ENST00000533656 ERVV-2B6SEH9 535 aa28.71■■■□□ 2.19
VPS51-212ENST00000533656 NCBP3Q53F19 620 aaKnown RBP28.71■■■□□ 2.19
VPS51-212ENST00000533656 NBPF14Q5TI25 921 aa28.71■■■□□ 2.19
VPS51-212ENST00000533656 BTAF1O14981 1849 aa28.71■■■□□ 2.19
VPS51-212ENST00000533656 APAF1O14727 1248 aa28.69■■■□□ 2.18
VPS51-212ENST00000533656 RIPK4P57078 832 aa28.69■■■□□ 2.18
VPS51-212ENST00000533656 MPRIPQ6WCQ1 1025 aa28.69■■■□□ 2.18
VPS51-212ENST00000533656 PROM2Q8N271 834 aa28.69■■■□□ 2.18
VPS51-212ENST00000533656 ADAMTS7Q9UKP4 1686 aa28.69■■■□□ 2.18
VPS51-212ENST00000533656 KAT6BQ8WYB5 2073 aa28.69■■■□□ 2.18
VPS51-212ENST00000533656 RNMTO43148 476 aaKnown RBP28.68■■■□□ 2.18
VPS51-212ENST00000533656 KCNQ2O43526 872 aa28.68■■■□□ 2.18
VPS51-212ENST00000533656 NGEFQ8N5V2 710 aa28.68■■■□□ 2.18
VPS51-212ENST00000533656 CEMIPQ8WUJ3 1361 aa28.67■■■□□ 2.18
VPS51-212ENST00000533656 DOT1LQ8TEK3 1739 aa28.66■■■□□ 2.18
VPS51-212ENST00000533656 MRC1P22897 1456 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms